Brain Lower Grade Glioma_LGG_TCGA-P5-A781-01A-11R-A32Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

186 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-P5-A781-01A-11R-A32Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCC8 ATP-binding cassette, sub-family C (CFTR/MRP), member 8
ABHD4 abhydrolase domain containing 4
ADGRF3 adhesion G protein-coupled receptor F3
AHSA1 AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)
ANGPTL1 angiopoietin-like 1
AQP4-AS1 AQP4 antisense RNA 1
AQP7 aquaporin 7
ARL6IP6 ADP-ribosylation factor-like 6 interacting protein 6
ATP11AUN ATP11A upstream neighbor
B3GAT2 beta-1,3-glucuronyltransferase 2
BARX2 BARX homeobox 2
BBIP1 BBSome interacting protein 1
BIRC6 baculoviral IAP repeat containing 6
BRD7P3 bromodomain containing 7 pseudogene 3
C11ORF65 chromosome 11 open reading frame 65
C18ORF32 chromosome 18 open reading frame 32
C1ORF131 chromosome 1 open reading frame 131
C22ORF46 chromosome 22 open reading frame 46
C2ORF76 chromosome 2 open reading frame 76
CACYBP calcyclin binding protein
CASC4 cancer susceptibility candidate 4
CASP7 caspase 7, apoptosis-related cysteine peptidase
CBX1 chromobox homolog 1
CCDC53 coiled-coil domain containing 53
CHMP5 charged multivesicular body protein 5
CHORDC1 cysteine and histidine-rich domain (CHORD) containing 1
CNTD1 cyclin N-terminal domain containing 1
COA5 cytochrome c oxidase assembly factor 5
CPE carboxypeptidase E
CPLX3 complexin 3
CRLS1 cardiolipin synthase 1
CST5 cystatin D
CYB5A cytochrome b5 type A (microsomal)
DBI diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)
DBIL5P diazepam binding inhibitor-like 5, pseudogene
DIRC2 disrupted in renal carcinoma 2
DKK4 dickkopf WNT signaling pathway inhibitor 4
DTX4 deltex 4, E3 ubiquitin ligase
DUSP13 dual specificity phosphatase 13
EBAG9 estrogen receptor binding site associated, antigen, 9
EFHB EF-hand domain family, member B
EXOC3L4 exocyst complex component 3-like 4
F5 coagulation factor V (proaccelerin, labile factor)
FAM149B1 family with sequence similarity 149, member B1
FAM210B family with sequence similarity 210, member B
FAM225A family with sequence similarity 225, member A (non-protein coding)
FAM86B1 family with sequence similarity 86, member B1
FAT3 FAT atypical cadherin 3
FLJ42627 uncharacterized LOC645644
GABBR1 gamma-aminobutyric acid (GABA) B receptor, 1
GATA5 GATA binding protein 5
GCSH glycine cleavage system protein H (aminomethyl carrier)
GFRAL GDNF family receptor alpha like
GIP gastric inhibitory polypeptide
GKAP1 G kinase anchoring protein 1
GLIPR1L2 GLI pathogenesis-related 1 like 2
GP6 glycoprotein VI (platelet)
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
GPX6 glutathione peroxidase 6
GRIN3A glutamate receptor, ionotropic, N-methyl-D-aspartate 3A
GSTM1 glutathione S-transferase mu 1
GSTM3 glutathione S-transferase mu 3 (brain)
HCRTR2 hypocretin (orexin) receptor 2
HHLA2 HERV-H LTR-associating 2
HMGCLL1 3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1
HSP90AB4P heat shock protein 90kDa alpha (cytosolic), class B member 4, pseudogene
HSPD1 heat shock 60kDa protein 1 (chaperonin)
IAPP islet amyloid polypeptide
IGLL3P immunoglobulin lambda-like polypeptide 3, pseudogene
IL21R interleukin 21 receptor
IL33 interleukin 33
INSL6 insulin-like 6
INTU inturned planar cell polarity protein
IQCF6 IQ motif containing F6
IQCK IQ motif containing K
IRX3 iroquois homeobox 3
JPH2 junctophilin 2
KCNJ11 potassium channel, inwardly rectifying subfamily J, member 11
KCNK16 potassium channel, two pore domain subfamily K, member 16
KIF6 kinesin family member 6
KLF5 Kruppel-like factor 5 (intestinal)
KLHL33 kelch-like family member 33
KLHL41 kelch-like family member 41
KLHL5 kelch-like family member 5
KLK8 kallikrein-related peptidase 8
LARS2 leucyl-tRNA synthetase 2, mitochondrial
LCN12 lipocalin 12
LINC00052 long intergenic non-protein coding RNA 52
LINC00114 long intergenic non-protein coding RNA 114
LINC01599 long intergenic non-protein coding RNA 1599
LOC100268168 uncharacterized LOC100268168
LOC285593 uncharacterized LOC285593
LOC392196 ubiquitin specific peptidase 17-like family member 2 pseudogene
LOC727896 cysteine and histidine-rich domain (CHORD) containing 1 pseudogene
MCMDC2 minichromosome maintenance domain containing 2
MDN1 MDN1, midasin homolog (yeast)
MT4 metallothionein 4
MYOD1 myogenic differentiation 1
NBR2 neighbor of BRCA1 gene 2 (non-protein coding)
NDRG2 NDRG family member 2
NEB nebulin
NFYB nuclear transcription factor Y, beta
NPY neuropeptide Y
NR2F1 nuclear receptor subfamily 2, group F, member 1
NT5C1B 5'-nucleotidase, cytosolic IB
OR13C2 olfactory receptor, family 13, subfamily C, member 2
OR1C1 olfactory receptor, family 1, subfamily C, member 1
OR2H2 olfactory receptor, family 2, subfamily H, member 2
OR2M1P olfactory receptor, family 2, subfamily M, member 1 pseudogene
OR2T33 olfactory receptor, family 2, subfamily T, member 33
OR4D9 olfactory receptor, family 4, subfamily D, member 9
OR51M1 olfactory receptor, family 51, subfamily M, member 1
OR52N4 olfactory receptor, family 52, subfamily N, member 4 (gene/pseudogene)
OR7D2 olfactory receptor, family 7, subfamily D, member 2
OTC ornithine carbamoyltransferase
PANX3 pannexin 3
PCDHA6 protocadherin alpha 6
PCDHGA5 protocadherin gamma subfamily A, 5
PCDHGB6 protocadherin gamma subfamily B, 6
PCSK9 proprotein convertase subtilisin/kexin type 9
PDZRN4 PDZ domain containing ring finger 4
PITX3 paired-like homeodomain 3
PON3 paraoxonase 3
POU4F1 POU class 4 homeobox 1
PRSS35 protease, serine, 35
PSG3 pregnancy specific beta-1-glycoprotein 3
PSMD10 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
PTCHD4 patched domain containing 4
PTGES3 prostaglandin E synthase 3 (cytosolic)
PTGR2 prostaglandin reductase 2
RAB23 RAB23, member RAS oncogene family
RAPSN receptor-associated protein of the synapse
RASGRP1 RAS guanyl releasing protein 1 (calcium and DAG-regulated)
RGS21 regulator of G-protein signaling 21
RLN2 relaxin 2
RNASE7 ribonuclease, RNase A family, 7
RNF217-AS1 RNF217 antisense RNA 1 (head to head)
RNF5P1 ring finger protein 5, E3 ubiquitin protein ligase pseudogene 1
SAMD5 sterile alpha motif domain containing 5
SAP18 Sin3A-associated protein, 18kDa
SAR1B secretion associated, Ras related GTPase 1B
SCARNA9L small Cajal body-specific RNA 9-like
SCD stearoyl-CoA desaturase (delta-9-desaturase)
SEC62 SEC62 homolog (S. cerevisiae)
SELL selectin L
SFTA3 surfactant associated 3
SH3YL1 SH3 and SYLF domain containing 1
SHCBP1L SHC SH2-domain binding protein 1-like
SLC23A3 solute carrier family 23, member 3
SLC35G1 solute carrier family 35, member G1
SLC38A1 solute carrier family 38, member 1
SLC44A2 solute carrier family 44 (choline transporter), member 2
SLC9B1 solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
SLCO1A2 solute carrier organic anion transporter family, member 1A2
SMAP1 small ArfGAP 1
SMCO1 single-pass membrane protein with coiled-coil domains 1
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase
SMIM8 small integral membrane protein 8
SNORA15 small nucleolar RNA, H/ACA box 15
SNORA65 small nucleolar RNA, H/ACA box 65
SPDYC speedy/RINGO cell cycle regulator family member C
SSX4 synovial sarcoma, X breakpoint 4
SULT6B1 sulfotransferase family, cytosolic, 6B, member 1
TARP TCR gamma alternate reading frame protein
TAS2R39 taste receptor, type 2, member 39
TAS2R40 taste receptor, type 2, member 40
TAS2R43 taste receptor, type 2, member 43
TAS2R46 taste receptor, type 2, member 46
TCEAL5 transcription elongation factor A (SII)-like 5
TDGF1 teratocarcinoma-derived growth factor 1
TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3
TEX15 testis expressed 15
TMEM116 transmembrane protein 116
TMEM9B TMEM9 domain family, member B
TNIP3 TNFAIP3 interacting protein 3
TRIM53AP tripartite motif containing 53A, pseudogene
TSLP thymic stromal lymphopoietin
TTN titin
VENTXP7 VENT homeobox pseudogene 7
WBP5 WW domain binding protein 5
XIST X inactive specific transcript (non-protein coding)
ZNF823 zinc finger protein 823
ZNF833P zinc finger protein 833, pseudogene
ZPBP zona pellucida binding protein

low expression

Symbol Name
CCZ1B CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)
NOMO1 NODAL modulator 1