Brain Lower Grade Glioma_LGG_TCGA-HW-8321-01A-11R-2404-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

253 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-HW-8321-01A-11R-2404-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABI1 abl-interactor 1
ACAD8 acyl-CoA dehydrogenase family, member 8
ACBD5 acyl-CoA binding domain containing 5
ACSM4 acyl-CoA synthetase medium-chain family member 4
ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif, 20
ADNP2 ADNP homeobox 2
AKR1B10 aldo-keto reductase family 1, member B10 (aldose reductase)
ANKRD16 ankyrin repeat domain 16
ANKRD28 ankyrin repeat domain 28
ANKRD31 ankyrin repeat domain 31
ANKRD50 ankyrin repeat domain 50
ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A
AOC2 amine oxidase, copper containing 2 (retina-specific)
ARCN1 archain 1
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38
ARL5B ADP-ribosylation factor-like 5B
ARMCX6 armadillo repeat containing, X-linked 6
ASB13 ankyrin repeat and SOCS box containing 13
ATP10A ATPase, class V, type 10A
ATP5C1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
BCL6B B-cell CLL/lymphoma 6, member B
BMP10 bone morphogenetic protein 10
C14ORF177 chromosome 14 open reading frame 177
C1ORF105 chromosome 1 open reading frame 105
C1ORF116 chromosome 1 open reading frame 116
C2ORF49 chromosome 2 open reading frame 49
C3ORF20 chromosome 3 open reading frame 20
C4ORF29 chromosome 4 open reading frame 29
CCL4 chemokine (C-C motif) ligand 4
CCL4L2 chemokine (C-C motif) ligand 4-like 2
CD82 CD82 molecule
CDC123 cell division cycle 123
CELF2 CUGBP, Elav-like family member 2
CLEC1A C-type lectin domain family 1, member A
CLEC4E C-type lectin domain family 4, member E
CMA1 chymase 1, mast cell
CPB1 carboxypeptidase B1 (tissue)
CSPG4P2Y chondroitin sulfate proteoglycan 4 pseudogene 2, Y-linked
CT47B1 cancer/testis antigen family 47, member B1
CTSG cathepsin G
CX3CL1 chemokine (C-X3-C motif) ligand 1
CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)
CYP19A1 cytochrome P450, family 19, subfamily A, polypeptide 1
DGKH diacylglycerol kinase, eta
DHTKD1 dehydrogenase E1 and transketolase domain containing 1
DHX33 DEAH (Asp-Glu-Ala-His) box polypeptide 33
DIAPH2 diaphanous-related formin 2
DIMT1 DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila)
DPH3P1 diphthamide biosynthesis 3 pseudogene 1
DUSP5P1 dual specificity phosphatase 5 pseudogene 1
EFCAB5 EF-hand calcium binding domain 5
EGF epidermal growth factor
EHF ets homologous factor
ELOVL7 ELOVL fatty acid elongase 7
ESYT2 extended synaptotagmin-like protein 2
FAM157A family with sequence similarity 157, member A
FAM182B family with sequence similarity 182, member B
FAM188A family with sequence similarity 188, member A
FAM208B family with sequence similarity 208, member B
FAM21A family with sequence similarity 21, member A
FBXO18 F-box protein, helicase, 18
FCAR Fc fragment of IgA receptor
FCMR Fc fragment of IgM receptor
FGF12 fibroblast growth factor 12
FHOD1 formin homology 2 domain containing 1
FLG filaggrin
FLT1 fms-related tyrosine kinase 1
FRK fyn-related Src family tyrosine kinase
FUT5 fucosyltransferase 5 (alpha (1,3) fucosyltransferase)
GALNT9 polypeptide N-acetylgalactosaminyltransferase 9
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4
GOLGA6C golgin A6 family, member C
GP1BA glycoprotein Ib (platelet), alpha polypeptide
GPR101 G protein-coupled receptor 101
GPR151 G protein-coupled receptor 151
GPX3 glutathione peroxidase 3
GTPBP4 GTP binding protein 4
HACD1 3-hydroxyacyl-CoA dehydratase 1
HAL histidine ammonia-lyase
HIPK3 homeodomain interacting protein kinase 3
HRNR hornerin
HSFY1P1 heat shock transcription factor, Y-linked 1 pseudogene 1
HSPA14 heat shock 70kDa protein 14
ICAM1 intercellular adhesion molecule 1
IGFBP1 insulin-like growth factor binding protein 1
IKZF4 IKAROS family zinc finger 4 (Eos)
IL4R interleukin 4 receptor
IL6R interleukin 6 receptor
IRAK2 interleukin-1 receptor-associated kinase 2
IRAK3 interleukin-1 receptor-associated kinase 3
JMJD1C jumonji domain containing 1C
KCNN3 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 3
KCNV2 potassium channel, voltage gated modifier subfamily V, member 2
KIN Kin17 DNA and RNA binding protein
KIR2DL3 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3
KLF7 Kruppel-like factor 7 (ubiquitous)
KLHL36 kelch-like family member 36
KLHL6 kelch-like family member 6
KRT24 keratin 24, type I
KRTAP10-12 keratin associated protein 10-12
KRTAP10-6 keratin associated protein 10-6
KRTAP27-1 keratin associated protein 27-1
LARP1B La ribonucleoprotein domain family, member 1B
LARP4B La ribonucleoprotein domain family, member 4B
LCP2 lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)
LIMS1 LIM and senescent cell antigen-like domains 1
LINC00235 long intergenic non-protein coding RNA 235
LOC392196 ubiquitin specific peptidase 17-like family member 2 pseudogene
LOC642852 uncharacterized LOC642852
LONRF3 LON peptidase N-terminal domain and ring finger 3
LRIG2 leucine-rich repeats and immunoglobulin-like domains 2
LRRN4 leucine rich repeat neuronal 4
MAS1L MAS1 proto-oncogene like, G protein-coupled receptor
MFSD8 major facilitator superfamily domain containing 8
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
MLNR motilin receptor
MMP16 matrix metallopeptidase 16 (membrane-inserted)
MRGPRX1 MAS-related GPR, member X1
MTAP methylthioadenosine phosphorylase
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
MYH4 myosin, heavy chain 4, skeletal muscle
NET1 neuroepithelial cell transforming 1
NFKBID nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta
NHSL2 NHS-like 2
NLRX1 NLR family member X1
NOTCH2 notch 2
NUDT4 nudix (nucleoside diphosphate linked moiety X)-type motif 4
OR10A6 olfactory receptor, family 10, subfamily A, member 6 (gene/pseudogene)
OR10G4 olfactory receptor, family 10, subfamily G, member 4
OR10K2 olfactory receptor, family 10, subfamily K, member 2
OR10W1 olfactory receptor, family 10, subfamily W, member 1
OR14C36 olfactory receptor, family 14, subfamily C, member 36
OR1F1 olfactory receptor, family 1, subfamily F, member 1
OR1F2P olfactory receptor, family 1, subfamily F, member 2, pseudogene
OR1N2 olfactory receptor, family 1, subfamily N, member 2
OR2AT4 olfactory receptor, family 2, subfamily AT, member 4
OR2L2 olfactory receptor, family 2, subfamily L, member 2
OR2L3 olfactory receptor, family 2, subfamily L, member 3
OR2M2 olfactory receptor, family 2, subfamily M, member 2
OR2M4 olfactory receptor, family 2, subfamily M, member 4
OR2T2 olfactory receptor, family 2, subfamily T, member 2
OR2T3 olfactory receptor, family 2, subfamily T, member 3
OR2T6 olfactory receptor, family 2, subfamily T, member 6
OR4X2 olfactory receptor, family 4, subfamily X, member 2 (gene/pseudogene)
OR5AU1 olfactory receptor, family 5, subfamily AU, member 1
OR6K3 olfactory receptor, family 6, subfamily K, member 3
OR8K3 olfactory receptor, family 8, subfamily K, member 3 (gene/pseudogene)
P2RY14 purinergic receptor P2Y, G-protein coupled, 14
PAX1 paired box 1
PCDH15 protocadherin-related 15
PCDHA2 protocadherin alpha 2
PCDHB16 protocadherin beta 16
PCDHGB5 protocadherin gamma subfamily B, 5
PDCD1 programmed cell death 1
PEAR1 platelet endothelial aggregation receptor 1
PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
PLA2G4F phospholipase A2, group IVF
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1
POU3F4 POU class 3 homeobox 4
PPA2 pyrophosphatase (inorganic) 2
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L
PPP1R2P9 protein phosphatase 1, regulatory (inhibitor) subunit 2 pseudogene 9
PRAMEF4 PRAME family member 4
PRAMEF8 PRAME family member 8
PRDM4 PR domain containing 4
PRR16 proline rich 16
PTCH1 patched 1
PTHLH parathyroid hormone-like hormone
PYGO1 pygopus family PHD finger 1
RAB18 RAB18, member RAS oncogene family
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
RBM20 RNA binding motif protein 20
RBMS2 RNA binding motif, single stranded interacting protein 2
RC3H2 ring finger and CCCH-type domains 2
REL v-rel avian reticuloendotheliosis viral oncogene homolog
RLF rearranged L-myc fusion
RNF152 ring finger protein 152
RPL10L ribosomal protein L10-like
RSU1 Ras suppressor protein 1
SCLT1 sodium channel and clathrin linker 1
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
SDR9C7 short chain dehydrogenase/reductase family 9C, member 7
SELE selectin E
SERINC5 serine incorporator 5
SERPINA12 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12
SFTPA2 surfactant protein A2
SLC11A2 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2
SLC15A4 solute carrier family 15 (oligopeptide transporter), member 4
SLC17A5 solute carrier family 17 (acidic sugar transporter), member 5
SLC30A1 solute carrier family 30 (zinc transporter), member 1
SLC35E2 solute carrier family 35, member E2
SLC36A3 solute carrier family 36, member 3
SLCO4A1 solute carrier organic anion transporter family, member 4A1
SMAD3 SMAD family member 3
SNORD115-7 small nucleolar RNA, C/D box 115-7
SNX9 sorting nexin 9
SPACA1 sperm acrosome associated 1
SPRR4 small proline-rich protein 4
STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
STAMBPL1 STAM binding protein-like 1
STARD8 StAR-related lipid transfer (START) domain containing 8
STC2 stanniocalcin 2
STON1-GTF2A1L STON1-GTF2A1L readthrough
STX11 syntaxin 11
SYDE2 synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
TAF7L TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa
TAOK3 TAO kinase 3
TAS2R38 taste receptor, type 2, member 38
TBATA thymus, brain and testes associated
TBC1D14 TBC1 domain family, member 14
TCN1 transcobalamin I (vitamin B12 binding protein, R binder family)
TCP10L t-complex 10-like
TINAG tubulointerstitial nephritis antigen
TMEM167A transmembrane protein 167A
TNFAIP3 tumor necrosis factor, alpha-induced protein 3
TNFAIP8L3 tumor necrosis factor, alpha-induced protein 8-like 3
TNFRSF10A tumor necrosis factor receptor superfamily, member 10a
TNFRSF21 tumor necrosis factor receptor superfamily, member 21
TNFRSF9 tumor necrosis factor receptor superfamily, member 9
TNFSF18 tumor necrosis factor (ligand) superfamily, member 18
TPST2 tyrosylprotein sulfotransferase 2
TRDMT1 tRNA aspartic acid methyltransferase 1
TTTY13 testis-specific transcript, Y-linked 13 (non-protein coding)
UBE4A ubiquitination factor E4A
USP24 ubiquitin specific peptidase 24
USP35 ubiquitin specific peptidase 35
USP44 ubiquitin specific peptidase 44
UTRN utrophin
VCAN versican
VN1R5 vomeronasal 1 receptor 5 (gene/pseudogene)
WAC WW domain containing adaptor with coiled-coil
YME1L1 YME1-like 1 ATPase
ZBTB26 zinc finger and BTB domain containing 26
ZFC3H1 zinc finger, C3H1-type containing
ZMYND11 zinc finger, MYND-type containing 11
ZNF525 zinc finger protein 525
ZNF573 zinc finger protein 573
ZNF699 zinc finger protein 699
ZNF710 zinc finger protein 710
ZNF77 zinc finger protein 77
ZNF845 zinc finger protein 845
ZSCAN4 zinc finger and SCAN domain containing 4

low expression

Symbol Name
ACAD9 acyl-CoA dehydrogenase family, member 9
COX7B cytochrome c oxidase subunit VIIb
CSNK1D casein kinase 1, delta
DIS3L2 DIS3 like 3'-5' exoribonuclease 2
FMR1 fragile X mental retardation 1
GOSR2 golgi SNAP receptor complex member 2
NCL nucleolin
SATL1 spermidine/spermine N1-acetyl transferase-like 1
TSPAN6 tetraspanin 6
ZNF711 zinc finger protein 711