Brain Lower Grade Glioma_LGG_TCGA-HT-A614-01A-11R-A29R-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

295 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-HT-A614-01A-11R-A29R-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
A2ML1 alpha-2-macroglobulin-like 1
AADAT aminoadipate aminotransferase
ABCD4 ATP-binding cassette, sub-family D (ALD), member 4
ACAP3 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
ACVR2A activin A receptor, type IIA
ADGRA3 adhesion G protein-coupled receptor A3
ADGRB1 adhesion G protein-coupled receptor B1
AKAP4 A kinase (PRKA) anchor protein 4
AKR7L aldo-keto reductase family 7-like (gene/pseudogene)
AMY2A amylase, alpha 2A (pancreatic)
ANKRD33 ankyrin repeat domain 33
APOC4 apolipoprotein C-IV
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7
ARL14 ADP-ribosylation factor-like 14
ARTN artemin
ASMT acetylserotonin O-methyltransferase
ATN1 atrophin 1
BCL11B B-cell CLL/lymphoma 11B (zinc finger protein)
BRF1 BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit
C10ORF99 chromosome 10 open reading frame 99
C11ORF94 chromosome 11 open reading frame 94
C17ORF99 chromosome 17 open reading frame 99
C1ORF101 chromosome 1 open reading frame 101
C1ORF168 chromosome 1 open reading frame 168
C1ORF174 chromosome 1 open reading frame 174
C1ORF52 chromosome 1 open reading frame 52
C20ORF173 chromosome 20 open reading frame 173
C2ORF27A chromosome 2 open reading frame 27A
C3ORF35 chromosome 3 open reading frame 35
C6ORF58 chromosome 6 open reading frame 58
C8ORF33 chromosome 8 open reading frame 33
CARD10 caspase recruitment domain family, member 10
CC2D2B coiled-coil and C2 domain containing 2B
CCDC88C coiled-coil domain containing 88C
CCND2 cyclin D2
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CDKN1C cyclin-dependent kinase inhibitor 1C (p57, Kip2)
CDRT15P1 CMT1A duplicated region transcript 15 pseudogene 1
CHRNE cholinergic receptor, nicotinic, epsilon (muscle)
CHRNG cholinergic receptor, nicotinic, gamma (muscle)
CIDEC cell death-inducing DFFA-like effector c
CLASRP CLK4-associating serine/arginine rich protein
CLCA2 chloride channel accessory 2
CLEC2D C-type lectin domain family 2, member D
CLEC4D C-type lectin domain family 4, member D
COMT catechol-O-methyltransferase
CPA2 carboxypeptidase A2 (pancreatic)
CPB2 carboxypeptidase B2 (plasma)
CPSF1 cleavage and polyadenylation specific factor 1, 160kDa
CRCT1 cysteine-rich C-terminal 1
CROCC ciliary rootlet coiled-coil, rootletin
CWF19L1 CWF19-like 1, cell cycle control (S. pombe)
CYB5A cytochrome b5 type A (microsomal)
CYFIP1 cytoplasmic FMR1 interacting protein 1
DBIL5P diazepam binding inhibitor-like 5, pseudogene
DDX26B DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
DDX4 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
DSG3 desmoglein 3
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1
EMC10 ER membrane protein complex subunit 10
ERVFRD-1 endogenous retrovirus group FRD, member 1
ESPNP espin pseudogene
EYA1 EYA transcriptional coactivator and phosphatase 1
EZR ezrin
F8 coagulation factor VIII, procoagulant component
FAM13A-AS1 FAM13A antisense RNA 1
FAM182B family with sequence similarity 182, member B
FAM58BP cyclin-related protein FAM58B
FAM69C family with sequence similarity 69, member C
FAM83H family with sequence similarity 83, member H
FANCL Fanconi anemia, complementation group L
FFAR1 free fatty acid receptor 1
FGFR4 fibroblast growth factor receptor 4
FITM1 fat storage-inducing transmembrane protein 1
FLJ37453 uncharacterized LOC729614
FMNL2 formin-like 2
FOLH1 folate hydrolase (prostate-specific membrane antigen) 1
FOXD4L3 forkhead box D4-like 3
FOXN1 forkhead box N1
FSTL5 follistatin-like 5
FXYD4 FXYD domain containing ion transport regulator 4
GALNT8 polypeptide N-acetylgalactosaminyltransferase 8
GLI4 GLI family zinc finger 4
GPR119 G protein-coupled receptor 119
GPR19 G protein-coupled receptor 19
GPT glutamic-pyruvate transaminase (alanine aminotransferase)
GPT2 glutamic pyruvate transaminase (alanine aminotransferase) 2
HEBP1 heme binding protein 1
HERC2P2 hect domain and RLD 2 pseudogene 2
HERC2P4 hect domain and RLD 2 pseudogene 4
HES5 hes family bHLH transcription factor 5
HFM1 HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)
HTR7P1 5-hydroxytryptamine (serotonin) receptor 7 pseudogene 1
IFFO1 intermediate filament family orphan 1
IFNA1 interferon, alpha 1
IL12A interleukin 12A
ING4 inhibitor of growth family, member 4
INPP1 inositol polyphosphate-1-phosphatase
INSL6 insulin-like 6
IVL involucrin
KCTD15 potassium channel tetramerization domain containing 15
KCTD6 potassium channel tetramerization domain containing 6
KHDC1L KH homology domain containing 1-like
KIAA1683 KIAA1683
KLHL35 kelch-like family member 35
KLK12 kallikrein-related peptidase 12
KLRAP1 killer cell lectin-like receptor subfamily A pseudogene 1
KLRC2 killer cell lectin-like receptor subfamily C, member 2
KLRC3 killer cell lectin-like receptor subfamily C, member 3
KLRC4 killer cell lectin-like receptor subfamily C, member 4
KLRK1 killer cell lectin-like receptor subfamily K, member 1
KNOP1 lysine-rich nucleolar protein 1
KRT35 keratin 35, type I
LCE1D late cornified envelope 1D
LCE1E late cornified envelope 1E
LCE6A late cornified envelope 6A
LECT2 leukocyte cell-derived chemotaxin 2
LINC00482 long intergenic non-protein coding RNA 482
LIPG lipase, endothelial
LOC150776 sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3) pseudogene
LOC151174 uncharacterized LOC151174
LOC374443 C-type lectin domain family 2, member D pseudogene
LOC388242 coiled-coil domain containing 101 pseudogene
LRP6 low density lipoprotein receptor-related protein 6
LRRC10B leucine rich repeat containing 10B
LRRC14 leucine rich repeat containing 14
LRRC24 leucine rich repeat containing 24
LRRC3 leucine rich repeat containing 3
M6PR mannose-6-phosphate receptor (cation dependent)
MAGOHB mago-nashi homolog B (Drosophila)
MARCKSL1 MARCKS-like 1
MEP1A meprin A, alpha (PABA peptide hydrolase)
METTL25 methyltransferase like 25
MFAP2 microfibrillar-associated protein 2
MLF2 myeloid leukemia factor 2
MORC1 MORC family CW-type zinc finger 1
MST1R macrophage stimulating 1 receptor
MTF2 metal response element binding transcription factor 2
NANOS2 nanos homolog 2 (Drosophila)
NAT2 N-acetyltransferase 2 (arylamine N-acetyltransferase)
NDUFAF6 NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
NHLH2 nescient helix loop helix 2
NLRP4 NLR family, pyrin domain containing 4
NOP2 NOP2 nucleolar protein
NPHP4 nephronophthisis 4
NPPB natriuretic peptide B
NPY neuropeptide Y
NR2C1 nuclear receptor subfamily 2, group C, member 1
NRTN neurturin
NSMCE4A non-SMC element 4 homolog A (S. cerevisiae)
NTSR2 neurotensin receptor 2
NUTM2A NUT family member 2A
ODF4 outer dense fiber of sperm tails 4
OR2K2 olfactory receptor, family 2, subfamily K, member 2
OR2M5 olfactory receptor, family 2, subfamily M, member 5
OR4F29 olfactory receptor, family 4, subfamily F, member 29
OR4K1 olfactory receptor, family 4, subfamily K, member 1
OR4K5 olfactory receptor, family 4, subfamily K, member 5
OR5AK2 olfactory receptor, family 5, subfamily AK, member 2
OR7D4 olfactory receptor, family 7, subfamily D, member 4
OXT oxytocin/neurophysin I prepropeptide
PACS2 phosphofurin acidic cluster sorting protein 2
PAXBP1 PAX3 and PAX7 binding protein 1
PBLD phenazine biosynthesis-like protein domain containing
PDE8A phosphodiesterase 8A
PEX5 peroxisomal biogenesis factor 5
PHB2 prohibitin 2
PHC1 polyhomeotic homolog 1 (Drosophila)
PHF20L1 PHD finger protein 20-like 1
PHGDH phosphoglycerate dehydrogenase
PLEKHN1 pleckstrin homology domain containing, family N member 1
POLR2J3 polymerase (RNA) II (DNA directed) polypeptide J3
PPBPP2 pro-platelet basic protein pseudogene 2
PRB4 proline-rich protein BstNI subfamily 4
PRH1 proline-rich protein HaeIII subfamily 1
PRH2 proline-rich protein HaeIII subfamily 2
PRPSAP1 phosphoribosyl pyrophosphate synthetase-associated protein 1
PRR18 proline rich 18
PRR25 proline rich 25
PRR4 proline rich 4 (lacrimal)
PRSS33 protease, serine, 33
PRSS35 protease, serine, 35
PRSS54 protease, serine, 54
PSAT1 phosphoserine aminotransferase 1
PSEN1 presenilin 1
PTGES3 prostaglandin E synthase 3 (cytosolic)
PTK2 protein tyrosine kinase 2
PUF60 poly-U binding splicing factor 60KDa
PURG purine-rich element binding protein G
RIMKLB ribosomal modification protein rimK-like family member B
RNASE11 ribonuclease, RNase A family, 11 (non-active)
RNASE12 ribonuclease, RNase A family, 12 (non-active)
RNF146 ring finger protein 146
RPL13P5 ribosomal protein L13 pseudogene 5
RPRM reprimo, TP53 dependent G2 arrest mediator candidate
RPTN repetin
S1PR1 sphingosine-1-phosphate receptor 1
SCHIP1 schwannomin interacting protein 1
SCRIB scribbled planar cell polarity protein
SEPT12 septin 12
SERPINB13 serpin peptidase inhibitor, clade B (ovalbumin), member 13
SFRP2 secreted frizzled-related protein 2
SH3BGR SH3 domain binding glutamate-rich protein
SLC22A20 solute carrier family 22, member 20
SLC22A6 solute carrier family 22 (organic anion transporter), member 6
SLC2A7 solute carrier family 2 (facilitated glucose transporter), member 7
SLC35B3 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3
SLC51A solute carrier family 51, alpha subunit
SLFN11 schlafen family member 11
SLURP1 secreted LY6/PLAUR domain containing 1
SMCP sperm mitochondria-associated cysteine-rich protein
SNHG10 small nucleolar RNA host gene 10
SNORA4 small nucleolar RNA, H/ACA box 4
SNORA70 small nucleolar RNA, H/ACA box 70
SNORA71B small nucleolar RNA, H/ACA box 71B
SNX31 sorting nexin 31
SPATA21 spermatogenesis associated 21
SPINK7 serine peptidase inhibitor, Kazal type 7 (putative)
SPO11 SPO11 meiotic protein covalently bound to DSB
SPRR1A small proline-rich protein 1A
SPRR2A small proline-rich protein 2A
SPRR2C small proline-rich protein 2C (pseudogene)
SPRR2E small proline-rich protein 2E
SPRR2G small proline-rich protein 2G
SPRR3 small proline-rich protein 3
SPSB2 splA/ryanodine receptor domain and SOCS box containing 2
SSX1 synovial sarcoma, X breakpoint 1
STOM stomatin
STOX1 storkhead box 1
STRA8 stimulated by retinoic acid 8
STRAP serine/threonine kinase receptor associated protein
TAS1R3 taste receptor, type 1, member 3
TAS2R14 taste receptor, type 2, member 14
TAS2R19 taste receptor, type 2, member 19
TAS2R20 taste receptor, type 2, member 20
TAS2R31 taste receptor, type 2, member 31
TAS2R39 taste receptor, type 2, member 39
TAS2R8 taste receptor, type 2, member 8
TBC1D28 TBC1 domain family, member 28
TCP10 t-complex 10
TEX12 testis expressed 12
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
TMEM105 transmembrane protein 105
TMEM125 transmembrane protein 125
TMEM249 transmembrane protein 249
TMEM86B transmembrane protein 86B
TNS4 tensin 4
TRAPPC12 trafficking protein particle complex 12
TRIM15 tripartite motif containing 15
TRMT61A tRNA methyltransferase 61A
TSPY1 testis specific protein, Y-linked 1
TTYH1 tweety family member 1
TYMSOS TYMS opposite strand
UBE2E3 ubiquitin-conjugating enzyme E2E 3
UBL4B ubiquitin-like 4B
UCN3 urocortin 3
UPF3A UPF3 regulator of nonsense transcripts homolog A (yeast)
UPK1A uroplakin 1A
UPK3BL uroplakin 3B-like
USP5 ubiquitin specific peptidase 5 (isopeptidase T)
VEPH1 ventricular zone expressed PH domain-containing 1
VIL1 villin 1
VTCN1 V-set domain containing T cell activation inhibitor 1
WDR33 WD repeat domain 33
ZAN zonadhesin (gene/pseudogene)
ZBTB47 zinc finger and BTB domain containing 47
ZNF251 zinc finger protein 251
ZNF337 zinc finger protein 337
ZNF384 zinc finger protein 384
ZNF517 zinc finger protein 517
ZNF547 zinc finger protein 547
ZNF596 zinc finger protein 596
ZNF662 zinc finger protein 662
ZNF7 zinc finger protein 7
ZNF823 zinc finger protein 823
ZNF839 zinc finger protein 839
ZNRF4 zinc and ring finger 4

low expression

Symbol Name
ANKHD1 ankyrin repeat and KH domain containing 1
COMMD10 COMM domain containing 10
CRNKL1 crooked neck pre-mRNA splicing factor 1
DHX29 DEAH (Asp-Glu-Ala-His) box polypeptide 29
DROSHA drosha, ribonuclease type III
IK IK cytokine, down-regulator of HLA II
LARP1 La ribonucleoprotein domain family, member 1
MRPS27 mitochondrial ribosomal protein S27
MRPS30 mitochondrial ribosomal protein S30
PFDN1 prefoldin subunit 1
PPIAL4C peptidylprolyl isomerase A (cyclophilin A)-like 4C
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme
PTCD2 pentatricopeptide repeat domain 2
SKIV2L2 superkiller viralicidic activity 2-like 2 (S. cerevisiae)
TTC9C tetratricopeptide repeat domain 9C
VDAC1 voltage-dependent anion channel 1
WDR55 WD repeat domain 55