Brain Lower Grade Glioma_LGG_TCGA-HT-8108-01A-11R-2404-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

307 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-HT-8108-01A-11R-2404-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AADACL3 arylacetamide deacetylase-like 3
ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif, 20
ADAR adenosine deaminase, RNA-specific
ADRB2 adrenoceptor beta 2, surface
ADRBK2 adrenergic, beta, receptor kinase 2
AGO4 argonaute RISC catalytic component 4
AKAP7 A kinase (PRKA) anchor protein 7
AKAP9 A kinase (PRKA) anchor protein 9
AKNA AT-hook transcription factor
AKR1E2 aldo-keto reductase family 1, member E2
ANKIB1 ankyrin repeat and IBR domain containing 1
ANKRD20A11P ankyrin repeat domain 20 family, member A11, pseudogene
ANKRD22 ankyrin repeat domain 22
ANKRD49 ankyrin repeat domain 49
ARHGAP12 Rho GTPase activating protein 12
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11
ARL5A ADP-ribosylation factor-like 5A
ASB7 ankyrin repeat and SOCS box containing 7
ASCL4 achaete-scute family bHLH transcription factor 4
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila)
ASIC5 acid sensing (proton gated) ion channel family member 5
ATAD2B ATPase family, AAA domain containing 2B
ATP8B2 ATPase, aminophospholipid transporter, class I, type 8B, member 2
ATP8B4 ATPase, class I, type 8B, member 4
AWAT1 acyl-CoA wax alcohol acyltransferase 1
BCAN brevican
BCL2L11 BCL2-like 11 (apoptosis facilitator)
BCL9 B-cell CLL/lymphoma 9
BIVM basic, immunoglobulin-like variable motif containing
C11ORF45 chromosome 11 open reading frame 45
C1ORF27 chromosome 1 open reading frame 27
C1ORF61 chromosome 1 open reading frame 61
C2ORF16 chromosome 2 open reading frame 16
C7ORF60 chromosome 7 open reading frame 60
C8A complement component 8, alpha polypeptide
CASD1 CAS1 domain containing 1
CBLB Cbl proto-oncogene B, E3 ubiquitin protein ligase
CBLL1 Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase
CCDC132 coiled-coil domain containing 132
CCDC185 coiled-coil domain containing 185
CD38 CD38 molecule
CDH7 cadherin 7, type 2
CDK14 cyclin-dependent kinase 14
CDK8 cyclin-dependent kinase 8
CDRT15P1 CMT1A duplicated region transcript 15 pseudogene 1
CELF2 CUGBP, Elav-like family member 2
CHD1L chromodomain helicase DNA binding protein 1-like
CLK2P1 CDC-like kinase 2, pseudogene 1
COG5 component of oligomeric golgi complex 5
COLCA1 colorectal cancer associated 1
CST9 cystatin 9 (testatin)
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1
DACH2 dachshund family transcription factor 2
DAP3 death associated protein 3
DCAF8 DDB1 and CUL4 associated factor 8
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like
DEFB119 defensin, beta 119
DENND1B DENN/MADD domain containing 1B
DET1 de-etiolated homolog 1 (Arabidopsis)
DICER1 dicer 1, ribonuclease type III
DLGAP1 discs, large (Drosophila) homolog-associated protein 1
DMTF1 cyclin D binding myb-like transcription factor 1
DUS4L dihydrouridine synthase 4-like (S. cerevisiae)
DUSP5P1 dual specificity phosphatase 5 pseudogene 1
EIF1AX eukaryotic translation initiation factor 1A, X-linked
EPC1 enhancer of polycomb homolog 1 (Drosophila)
EPHB1 EPH receptor B1
ERO1LB ERO1-like beta (S. cerevisiae)
ERVFRD-1 endogenous retrovirus group FRD, member 1
EVI2B ecotropic viral integration site 2B
FAM106CP family with sequence similarity 106, member C, pseudogene
FAM133B family with sequence similarity 133, member B
FAM182B family with sequence similarity 182, member B
FAM189B family with sequence similarity 189, member B
FAM196B family with sequence similarity 196, member B
FAM200A family with sequence similarity 200, member A
FAM35DP family with sequence similarity 35, member A pseudogene
FAT1 FAT atypical cadherin 1
FCAMR Fc receptor, IgA, IgM, high affinity
FGF20 fibroblast growth factor 20
FIBIN fin bud initiation factor homolog (zebrafish)
FLAD1 flavin adenine dinucleotide synthetase 1
FMO2 flavin containing monooxygenase 2 (non-functional)
FRG2 FSHD region gene 2
FRG2B FSHD region gene 2 family, member B
FRG2C FSHD region gene 2 family, member C
FRMD4A FERM domain containing 4A
GGTA1P glycoprotein, alpha-galactosyltransferase 1 pseudogene
GIMAP2 GTPase, IMAP family member 2
GLRA3 glycine receptor, alpha 3
GON4L gon-4-like (C. elegans)
GPATCH4 G patch domain containing 4
GPR180 G protein-coupled receptor 180
GPR34 G protein-coupled receptor 34
GRIK3 glutamate receptor, ionotropic, kainate 3
GTPBP10 GTP-binding protein 10 (putative)
HDHD1 haloacid dehalogenase-like hydrolase domain containing 1
HFM1 HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)
HMCN1 hemicentin 1
HULC hepatocellular carcinoma up-regulated long non-coding RNA
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble
IFI44L interferon-induced protein 44-like
IFNE interferon, epsilon
IFNGR1 interferon gamma receptor 1
IL18 interleukin 18
ISG20L2 interferon stimulated exonuclease gene 20kDa-like 2
IVNS1ABP influenza virus NS1A binding protein
JMJD1C jumonji domain containing 1C
KBTBD13 kelch repeat and BTB (POZ) domain containing 13
KCND2 potassium channel, voltage gated Shal related subfamily D, member 2
KCNK16 potassium channel, two pore domain subfamily K, member 16
KCNN3 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 3
KIAA0087 KIAA0087
KIAA0754 KIAA0754
KIAA0907 KIAA0907
KIAA1147 KIAA1147
KIR3DP1 killer cell immunoglobulin-like receptor, three domains, pseudogene 1
KMT2C lysine (K)-specific methyltransferase 2C
KMT2E lysine (K)-specific methyltransferase 2E
KRIT1 KRIT1, ankyrin repeat containing
KRTAP11-1 keratin associated protein 11-1
KRTAP4-4 keratin associated protein 4-4
LDHAL6A lactate dehydrogenase A-like 6A
LDLRAD1 low density lipoprotein receptor class A domain containing 1
LIFR leukemia inhibitory factor receptor alpha
LIM2 lens intrinsic membrane protein 2, 19kDa
LINC00028 long intergenic non-protein coding RNA 28
LINC00696 long intergenic non-protein coding RNA 696
LINS lines homolog (Drosophila)
LOC152225 uncharacterized LOC152225
LOC284632 uncharacterized LOC284632
LOC286094
LOC642852 uncharacterized LOC642852
LRIF1 ligand dependent nuclear receptor interacting factor 1
LRIG2 leucine-rich repeats and immunoglobulin-like domains 2
LRP1B low density lipoprotein receptor-related protein 1B
LUC7L2 LUC7-like 2 (S. cerevisiae)
LURAP1L leucine rich adaptor protein 1-like
LUZP6 leucine zipper protein 6
MAGEA8 melanoma antigen family A8
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3
MAML2 mastermind-like 2 (Drosophila)
MAN1A2 mannosidase, alpha, class 1A, member 2
MCM3AP-AS1 MCM3AP antisense RNA 1
MED28 mediator complex subunit 28
MKRN1 makorin ring finger protein 1
MKRN3 makorin ring finger protein 3
MORC1 MORC family CW-type zinc finger 1
MROH2B maestro heat-like repeat family member 2B
MRPS14 mitochondrial ribosomal protein S14
MSMO1 methylsterol monooxygenase 1
MSTO1 misato 1, mitochondrial distribution and morphology regulator
MTERF1 mitochondrial transcription termination factor 1
MTMR1 myotubularin related protein 1
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
MYO1A myosin IA
NCSTN nicastrin
NKD1 naked cuticle homolog 1 (Drosophila)
NLRP1 NLR family, pyrin domain containing 1
NREP neuronal regeneration related protein
NT5E 5'-nucleotidase, ecto (CD73)
NUDT11 nudix (nucleoside diphosphate linked moiety X)-type motif 11
OIT3 oncoprotein induced transcript 3
OR10AD1 olfactory receptor, family 10, subfamily AD, member 1
OR10G7 olfactory receptor, family 10, subfamily G, member 7
OR1K1 olfactory receptor, family 1, subfamily K, member 1
OR1Q1 olfactory receptor, family 1, subfamily Q, member 1
OR4K2 olfactory receptor, family 4, subfamily K, member 2
OR51Q1 olfactory receptor, family 51, subfamily Q, member 1 (gene/pseudogene)
OR52A5 olfactory receptor, family 52, subfamily A, member 5
OR52E4 olfactory receptor, family 52, subfamily E, member 4
OR52H1 olfactory receptor, family 52, subfamily H, member 1
OR52N2 olfactory receptor, family 52, subfamily N, member 2
OR56B1 olfactory receptor, family 56, subfamily B, member 1
P2RY12 purinergic receptor P2Y, G-protein coupled, 12
PCDH15 protocadherin-related 15
PCDHGB5 protocadherin gamma subfamily B, 5
PCTP phosphatidylcholine transfer protein
PDC phosducin
PDGFC platelet derived growth factor C
PEA15 phosphoprotein enriched in astrocytes 15
PEX1 peroxisomal biogenesis factor 1
PEX11A peroxisomal biogenesis factor 11 alpha
PEX19 peroxisomal biogenesis factor 19
PGBD2 piggyBac transposable element derived 2
PHTF2 putative homeodomain transcription factor 2
PIGM phosphatidylinositol glycan anchor biosynthesis, class M
PLA2G12B phospholipase A2, group XIIB
PLAC1 placenta-specific 1
PLXNA4 plexin A4
PMPCB peptidase (mitochondrial processing) beta
POM121L10P POM121 transmembrane nucleoporin-like 10, pseudogene
PRB3 proline-rich protein BstNI subfamily 3
PRKAB2 protein kinase, AMP-activated, beta 2 non-catalytic subunit
PRKACG protein kinase, cAMP-dependent, catalytic, gamma
PRKRIR protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
PTCHD2 patched domain containing 2
REC114 REC114 meiotic recombination protein
RECK reversion-inducing-cysteine-rich protein with kazal motifs
REV1 REV1, polymerase (DNA directed)
RFX7 regulatory factor X, 7
RGS10 regulator of G-protein signaling 10
RGS18 regulator of G-protein signaling 18
RIT1 Ras-like without CAAX 1
RPGRIP1 retinitis pigmentosa GTPase regulator interacting protein 1
RPS15AP10 ribosomal protein S15a pseudogene 10
RPS26P11 ribosomal protein S26 pseudogene 11
RSBN1 round spermatid basic protein 1
RSBN1L round spermatid basic protein 1-like
RUSC1-AS1 RUSC1 antisense RNA 1
S100A12 S100 calcium binding protein A12
S100Z S100 calcium binding protein Z
SAMD9 sterile alpha motif domain containing 9
SCN3A sodium channel, voltage gated, type III alpha subunit
SEC1P secretory blood group 1, pseudogene
SEMA5B sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
SESN1 sestrin 1
SGCZ sarcoglycan, zeta
SGPL1 sphingosine-1-phosphate lyase 1
SH3RF1 SH3 domain containing ring finger 1
SLC15A2 solute carrier family 15 (oligopeptide transporter), member 2
SLC22A20 solute carrier family 22, member 20
SLC25A40 solute carrier family 25, member 40
SLC25A44 solute carrier family 25, member 44
SLC37A3 solute carrier family 37, member 3
SMG5 SMG5 nonsense mediated mRNA decay factor
SNORA2B small nucleolar RNA, H/ACA box 2B
SNORA70 small nucleolar RNA, H/ACA box 70
SRGAP2 SLIT-ROBO Rho GTPase activating protein 2
SRP9 signal recognition particle 9kDa
SRPK2 SRSF protein kinase 2
SSH2 slingshot protein phosphatase 2
STK17B serine/threonine kinase 17b
SWT1 SWT1 RNA endoribonuclease homolog (S. cerevisiae)
TAS2R10 taste receptor, type 2, member 10
TAS2R40 taste receptor, type 2, member 40
TBC1D2B TBC1 domain family, member 2B
TBC1D4 TBC1 domain family, member 4
TBPL1 TBP-like 1
TET2 tet methylcytosine dioxygenase 2
TET3 tet methylcytosine dioxygenase 3
TEX13B testis expressed 13B
TEX9 testis expressed 9
TFB2M transcription factor B2, mitochondrial
THAP5 THAP domain containing 5
TMCC1 transmembrane and coiled-coil domain family 1
TMEM213 transmembrane protein 213
TMEM236 transmembrane protein 236
TMEM51-AS1 TMEM51 antisense RNA 1
TOX3 TOX high mobility group box family member 3
TPP2 tripeptidyl peptidase II
TPR translocated promoter region, nuclear basket protein
TPTEP1 transmembrane phosphatase with tensin homology pseudogene 1
TRAF3 TNF receptor-associated factor 3
TRIM33 tripartite motif containing 33
TRMT1L tRNA methyltransferase 1 homolog (S. cerevisiae)-like
TTC21B tetratricopeptide repeat domain 21B
TTLL8 tubulin tyrosine ligase-like family member 8
TUG1 taurine up-regulated 1 (non-protein coding)
UBE2Q1 ubiquitin-conjugating enzyme E2Q family member 1
UBN2 ubinuclein 2
USP17L2 ubiquitin specific peptidase 17-like family member 2
USP3 ubiquitin specific peptidase 3
USP53 ubiquitin specific peptidase 53
VIPR2 vasoactive intestinal peptide receptor 2
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae)
VTCN1 V-set domain containing T cell activation inhibitor 1
XIST X inactive specific transcript (non-protein coding)
XRN1 5'-3' exoribonuclease 1
YY1AP1 YY1 associated protein 1
ZBTB26 zinc finger and BTB domain containing 26
ZFX zinc finger protein, X-linked
ZKSCAN5 zinc finger with KRAB and SCAN domains 5
ZNF124 zinc finger protein 124
ZNF154 zinc finger protein 154
ZNF175 zinc finger protein 175
ZNF182 zinc finger protein 182
ZNF280D zinc finger protein 280D
ZNF286B zinc finger protein 286B
ZNF292 zinc finger protein 292
ZNF3 zinc finger protein 3
ZNF311 zinc finger protein 311
ZNF37A zinc finger protein 37A
ZNF425 zinc finger protein 425
ZNF449 zinc finger protein 449
ZNF548 zinc finger protein 548
ZNF551 zinc finger protein 551
ZNF594 zinc finger protein 594
ZNF597 zinc finger protein 597
ZNF608 zinc finger protein 608
ZNF614 zinc finger protein 614
ZNF655 zinc finger protein 655
ZNF662 zinc finger protein 662
ZNF721 zinc finger protein 721
ZNF772 zinc finger protein 772
ZNF786 zinc finger protein 786
ZNF804A zinc finger protein 804A
ZNF827 zinc finger protein 827
ZSCAN21 zinc finger and SCAN domain containing 21
ZSCAN23 zinc finger and SCAN domain containing 23
ZSCAN25 zinc finger and SCAN domain containing 25
ZSWIM5 zinc finger, SWIM-type containing 5
ZSWIM6 zinc finger, SWIM-type containing 6

low expression

Symbol Name
GTF2H5 general transcription factor IIH, polypeptide 5
MRPL18 mitochondrial ribosomal protein L18
RILPL1 Rab interacting lysosomal protein-like 1
SNUPN snurportin 1