Brain Lower Grade Glioma_LGG_TCGA-HT-7690-01A-11R-2256-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

144 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-HT-7690-01A-11R-2256-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
A1BG alpha-1-B glycoprotein
ACTL7B actin-like 7B
AKAP7 A kinase (PRKA) anchor protein 7
AKR1C6P aldo-keto reductase family 1, member C6, pseudogene
ANGPTL6 angiopoietin-like 6
APLF aprataxin and PNKP like factor
B3GALT6 UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6
BBS12 Bardet-Biedl syndrome 12
C10ORF55 chromosome 10 open reading frame 55
C20ORF141 chromosome 20 open reading frame 141
C4ORF33 chromosome 4 open reading frame 33
C4ORF36 chromosome 4 open reading frame 36
C9 complement component 9
CALCR calcitonin receptor
CBWD1 COBW domain containing 1
CENPBD1 CENPB DNA-binding domains containing 1
CENPV centromere protein V
CTBP1-AS2 CTBP1 antisense RNA 2 (head to head)
CTSW cathepsin W
DCAF12L2 DDB1 and CUL4 associated factor 12-like 2
FAM182B family with sequence similarity 182, member B
FAM90A1 family with sequence similarity 90, member A1
FANCD2OS FANCD2 opposite strand
FHL1 four and a half LIM domains 1
FOXR1 forkhead box R1
GALC galactosylceramidase
GALE UDP-galactose-4-epimerase
GALNT14 polypeptide N-acetylgalactosaminyltransferase 14
GNLY granulysin
GPR119 G protein-coupled receptor 119
GPR182 G protein-coupled receptor 182
GTDC1 glycosyltransferase-like domain containing 1
GZMA granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)
GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)
HCG22 HLA complex group 22
HCRTR2 hypocretin (orexin) receptor 2
IDO2 indoleamine 2,3-dioxygenase 2
IGLON5 IgLON family member 5
IL2RB interleukin 2 receptor, beta
IRAK1 interleukin-1 receptor-associated kinase 1
ITGAD integrin, alpha D
KIR2DL1 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1
KIR2DL3 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3
KIR2DL4 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 4
KIR2DS4 killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4
KIR3DL1 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 1
KLRD1 killer cell lectin-like receptor subfamily D, member 1
KPTN kaptin (actin binding protein)
KRT35 keratin 35, type I
LILRP2 leukocyte immunoglobulin-like receptor pseudogene 2
LIM2 lens intrinsic membrane protein 2, 19kDa
MAGEB4 melanoma antigen family B4
MAP10 microtubule-associated protein 10
MASP1 mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
MEX3C mex-3 RNA binding family member C
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
NCK2 NCK adaptor protein 2
NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1
NKAPL NFKB activating protein-like
NOD2 nucleotide-binding oligomerization domain containing 2
NPHP3-AS1 NPHP3 antisense RNA 1
NPSR1 neuropeptide S receptor 1
OLFML2B olfactomedin-like 2B
OR1I1 olfactory receptor, family 1, subfamily I, member 1
OR1N2 olfactory receptor, family 1, subfamily N, member 2
OR4K13 olfactory receptor, family 4, subfamily K, member 13
OR4K14 olfactory receptor, family 4, subfamily K, member 14
OR52K2 olfactory receptor, family 52, subfamily K, member 2
OR52L1 olfactory receptor, family 52, subfamily L, member 1
OR6B1 olfactory receptor, family 6, subfamily B, member 1
OXT oxytocin/neurophysin I prepropeptide
PALD1 phosphatase domain containing, paladin 1
PCDHA10 protocadherin alpha 10
PCDHGA4 protocadherin gamma subfamily A, 4
PGK2 phosphoglycerate kinase 2
PLAC8 placenta-specific 8
PLAU plasminogen activator, urokinase
POU4F3 POU class 4 homeobox 3
PRDM14 PR domain containing 14
PRF1 perforin 1 (pore forming protein)
PRKACG protein kinase, cAMP-dependent, catalytic, gamma
PRR16 proline rich 16
PRR25 proline rich 25
PRSS35 protease, serine, 35
PTGER3 prostaglandin E receptor 3 (subtype EP3)
RBM45 RNA binding motif protein 45
RHOH ras homolog family member H
RNASE2 ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)
RNASE3 ribonuclease, RNase A family, 3
RPRM reprimo, TP53 dependent G2 arrest mediator candidate
RPS4Y2 ribosomal protein S4, Y-linked 2
RSPO3 R-spondin 3
RWDD2A RWD domain containing 2A
S100A3 S100 calcium binding protein A3
S1PR3 sphingosine-1-phosphate receptor 3
SCIN scinderin
SERPINB7 serpin peptidase inhibitor, clade B (ovalbumin), member 7
SGCG sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)
SLC10A6 solute carrier family 10 (sodium/bile acid cotransporter), member 6
SLC22A20 solute carrier family 22, member 20
SMAD5-AS1 SMAD5 antisense RNA 1
SPESP1 sperm equatorial segment protein 1
SPTA1 spectrin, alpha, erythrocytic 1
SRMS src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites
SSR4P1 signal sequence receptor, delta pseudogene 1
SSTR1 somatostatin receptor 1
SSX1 synovial sarcoma, X breakpoint 1
SSX6 synovial sarcoma, X breakpoint 6 (pseudogene)
SUMO1P1 SUMO1 pseudogene 1
SVEP1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
SYNDIG1 synapse differentiation inducing 1
TCHH trichohyalin
TIGD2 tigger transposable element derived 2
TINF2 TERF1 (TRF1)-interacting nuclear factor 2
TMEM164 transmembrane protein 164
TMOD4 tropomodulin 4 (muscle)
TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene
TSHR thyroid stimulating hormone receptor
TSPY1 testis specific protein, Y-linked 1
TUBB tubulin, beta class I
TUSC1 tumor suppressor candidate 1
UXS1 UDP-glucuronate decarboxylase 1
ZBTB22 zinc finger and BTB domain containing 22
ZDHHC16 zinc finger, DHHC-type containing 16
ZNF350 zinc finger protein 350
ZNF410 zinc finger protein 410
ZNF436 zinc finger protein 436
ZNF705D zinc finger protein 705D
ZSCAN1 zinc finger and SCAN domain containing 1

low expression

Symbol Name
ACTR8 ARP8 actin-related protein 8 homolog (yeast)
ASB8 ankyrin repeat and SOCS box containing 8
CHCHD4 coiled-coil-helix-coiled-coil-helix domain containing 4
CUL3 cullin 3
GTPBP1 GTP binding protein 1
LARP4 La ribonucleoprotein domain family, member 4
METTL6 methyltransferase like 6
MKRN2 makorin ring finger protein 2
PUM2 pumilio RNA-binding family member 2
RAB5B RAB5B, member RAS oncogene family
SMARCC2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
TFIP11 tuftelin interacting protein 11
TSEN2 TSEN2 tRNA splicing endonuclease subunit
USP4 ubiquitin specific peptidase 4 (proto-oncogene)
ZNF630 zinc finger protein 630