Brain Lower Grade Glioma_LGG_TCGA-HT-7480-01A-11R-2090-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

240 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-HT-7480-01A-11R-2090-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2
ADGRV1 adhesion G protein-coupled receptor V1
AGAP7P ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogene
AKR1C6P aldo-keto reductase family 1, member C6, pseudogene
ALMS1 Alstrom syndrome protein 1
ALMS1P Alstrom syndrome 1 pseudogene
ANKAR ankyrin and armadillo repeat containing
ANKFN1 ankyrin-repeat and fibronectin type III domain containing 1
ANKRD6 ankyrin repeat domain 6
AOX2P aldehyde oxidase 2 pseudogene
APOBEC2 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2
AQP12A aquaporin 12A
ARFGEF3 ARFGEF family member 3
ARL10 ADP-ribosylation factor-like 10
ATCAY ataxia, cerebellar, Cayman type
ATM ATM serine/threonine kinase
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2
BAGE2 B melanoma antigen family, member 2
BCL9 B-cell CLL/lymphoma 9
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
BIRC6 baculoviral IAP repeat containing 6
BMS1P5 BMS1 ribosome biogenesis factor pseudogene 5
BRPF3 bromodomain and PHD finger containing, 3
BTNL2 butyrophilin-like 2
C14ORF37 chromosome 14 open reading frame 37
C5ORF42 chromosome 5 open reading frame 42
CAMSAP2 calmodulin regulated spectrin-associated protein family, member 2
CCDC171 coiled-coil domain containing 171
CCNI2 cyclin I family, member 2
CD38 CD38 molecule
CECR2 cat eye syndrome chromosome region, candidate 2
CEP350 centrosomal protein 350kDa
CEP68 centrosomal protein 68kDa
CHD6 chromodomain helicase DNA binding protein 6
CLEC4F C-type lectin domain family 4, member F
CPNE5 copine V
CSPG4P2Y chondroitin sulfate proteoglycan 4 pseudogene 2, Y-linked
CXXC4 CXXC finger protein 4
DAND5 DAN domain family member 5, BMP antagonist
DEFB109P1B defensin, beta 109, pseudogene 1B
DNAH1 dynein, axonemal, heavy chain 1
DNHD1 dynein heavy chain domain 1
DSCAM Down syndrome cell adhesion molecule
DST dystonin
EFHB EF-hand domain family, member B
ELFN2 extracellular leucine-rich repeat and fibronectin type III domain containing 2
ELMO1 engulfment and cell motility 1
EML5 echinoderm microtubule associated protein like 5
EP300 E1A binding protein p300
EP400 E1A binding protein p400
EXOC2 exocyst complex component 2
FAM120B family with sequence similarity 120B
FAM196B family with sequence similarity 196, member B
FAM21A family with sequence similarity 21, member A
FAM47E family with sequence similarity 47, member E
FAM90A1 family with sequence similarity 90, member A1
FGD3 FYVE, RhoGEF and PH domain containing 3
FHDC1 FH2 domain containing 1
FKTN fukutin
FLCN folliculin
FLG2 filaggrin family member 2
FLJ42627 uncharacterized LOC645644
FMO2 flavin containing monooxygenase 2 (non-functional)
FOXP2 forkhead box P2
FRG1B FSHD region gene 1 family, member B
GLP1R glucagon-like peptide 1 receptor
GLT6D1 glycosyltransferase 6 domain containing 1
GRID2IP glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein
GRIN3A glutamate receptor, ionotropic, N-methyl-D-aspartate 3A
GSTM1 glutathione S-transferase mu 1
GTF2A1 general transcription factor IIA, 1, 19/37kDa
GYPB glycophorin B (MNS blood group)
HCG18 HLA complex group 18 (non-protein coding)
HDAC4 histone deacetylase 4
HIP1 huntingtin interacting protein 1
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1
HKDC1 hexokinase domain containing 1
HSF2BP heat shock transcription factor 2 binding protein
IGSF9B immunoglobulin superfamily, member 9B
ILDR2 immunoglobulin-like domain containing receptor 2
INVS inversin
KCNH7 potassium channel, voltage gated eag related subfamily H, member 7
KCNIP3 Kv channel interacting protein 3, calsenilin
KCTD21 potassium channel tetramerization domain containing 21
KIAA0087 KIAA0087
KIAA1147 KIAA1147
KIF21B kinesin family member 21B
KIF3A kinesin family member 3A
KLF12 Kruppel-like factor 12
KMT2A lysine (K)-specific methyltransferase 2A
KRT85 keratin 85, type II
KRTAP10-10 keratin associated protein 10-10
KSR1 kinase suppressor of ras 1
KTN1-AS1 KTN1 antisense RNA 1
LINC00029 long intergenic non-protein coding RNA 29
LINC00114 long intergenic non-protein coding RNA 114
LINC00319 long intergenic non-protein coding RNA 319
LINC00472 long intergenic non-protein coding RNA 472
LOC100130691 uncharacterized LOC100130691
LOC100190986 uncharacterized LOC100190986
LOC148696 uncharacterized LOC148696
LOC284788 uncharacterized LOC284788
LOC285692 uncharacterized LOC285692
LOC642846 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11-like
LOC643486
LOC646214 p21 protein (Cdc42/Rac)-activated kinase 2 pseudogene
LPA lipoprotein, Lp(a)
LRP8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
LRRC37A4P leucine rich repeat containing 37, member A4, pseudogene
LRRN1 leucine rich repeat neuronal 1
MAP3K13 mitogen-activated protein kinase kinase kinase 13
MBL1P mannose-binding lectin (protein A) 1, pseudogene
MCM3AP-AS1 MCM3AP antisense RNA 1
MDN1 MDN1, midasin homolog (yeast)
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase
MMD2 monocyte to macrophage differentiation-associated 2
MTNR1A melatonin receptor 1A
NAV1 neuron navigator 1
NBEAL1 neurobeachin-like 1
NBPF10 neuroblastoma breakpoint family, member 10
NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1
NEB nebulin
NEU3 sialidase 3 (membrane sialidase)
NF1 neurofibromin 1
NHSL1 NHS-like 1
NLRP2 NLR family, pyrin domain containing 2
NLRP7 NLR family, pyrin domain containing 7
NMU neuromedin U
NPHS2 nephrosis 2, idiopathic, steroid-resistant (podocin)
NR2C2 nuclear receptor subfamily 2, group C, member 2
OR1B1 olfactory receptor, family 1, subfamily B, member 1 (gene/pseudogene)
OR1E2 olfactory receptor, family 1, subfamily E, member 2
OR1N2 olfactory receptor, family 1, subfamily N, member 2
OR51B5 olfactory receptor, family 51, subfamily B, member 5
OR51M1 olfactory receptor, family 51, subfamily M, member 1
OR52A5 olfactory receptor, family 52, subfamily A, member 5
OR56B1 olfactory receptor, family 56, subfamily B, member 1
OR5P2 olfactory receptor, family 5, subfamily P, member 2
OR6T1 olfactory receptor, family 6, subfamily T, member 1
P2RY4 pyrimidinergic receptor P2Y, G-protein coupled, 4
PAPLN papilin, proteoglycan-like sulfated glycoprotein
PARP8 poly (ADP-ribose) polymerase family, member 8
PCDHA12 protocadherin alpha 12
PCDHB1 protocadherin beta 1
PCDHB13 protocadherin beta 13
PCDHB7 protocadherin beta 7
PCDHB8 protocadherin beta 8
PCDHGA1 protocadherin gamma subfamily A, 1
PCDHGA11 protocadherin gamma subfamily A, 11
PCDHGB6 protocadherin gamma subfamily B, 6
PDC phosducin
PDZD8 PDZ domain containing 8
PHLPP2 PH domain and leucine rich repeat protein phosphatase 2
PLEKHH2 pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
PLEKHM1P pleckstrin homology domain containing, family M (with RUN domain) member 1 pseudogene
PLGLB2 plasminogen-like B2
PPARGC1B peroxisome proliferator-activated receptor gamma, coactivator 1 beta
PPBPP2 pro-platelet basic protein pseudogene 2
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L
PPP3R2 protein phosphatase 3, regulatory subunit B, beta
PRDM11 PR domain containing 11
PRRC2C proline-rich coiled-coil 2C
R3HDML R3H domain containing-like
RASA2 RAS p21 protein activator 2
RASAL2 RAS protein activator like 2
RBM25 RNA binding motif protein 25
RFX6 regulatory factor X, 6
RNASE8 ribonuclease, RNase A family, 8
RPS4Y2 ribosomal protein S4, Y-linked 2
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
SAMD5 sterile alpha motif domain containing 5
SASH1 SAM and SH3 domain containing 1
SATB1 SATB homeobox 1
SCARA5 scavenger receptor class A, member 5
SERINC5 serine incorporator 5
SETD5 SET domain containing 5
SGSM1 small G protein signaling modulator 1
SHC3 SHC (Src homology 2 domain containing) transforming protein 3
SHPRH SNF2 histone linker PHD RING helicase, E3 ubiquitin protein ligase
SIDT2 SID1 transmembrane family, member 2
SIK2 salt-inducible kinase 2
SLC14A2 solute carrier family 14 (urea transporter), member 2
SLC38A7 solute carrier family 38, member 7
SLC6A18 solute carrier family 6 (neutral amino acid transporter), member 18
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5
SLITRK6 SLIT and NTRK-like family, member 6
SMAD9 SMAD family member 9
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase
SNORD116-28 small nucleolar RNA, C/D box 116-28
SNX29P2 sorting nexin 29 pseudogene 2
SOGA1 suppressor of glucose, autophagy associated 1
SP7 Sp7 transcription factor
SPACA1 sperm acrosome associated 1
SPATA31A5 SPATA31 subfamily A, member 5
SPHKAP SPHK1 interactor, AKAP domain containing
SRCAP Snf2-related CREBBP activator protein
SSTR2 somatostatin receptor 2
STH saitohin
SUGT1P1 SUGT1 pseudogene 1
SYNE1 spectrin repeat containing, nuclear envelope 1
SYT8 synaptotagmin VIII
TAS2R3 taste receptor, type 2, member 3
TAS2R4 taste receptor, type 2, member 4
TECTA tectorin alpha
THSD7A thrombospondin, type I, domain containing 7A
TMPRSS12 transmembrane (C-terminal) protease, serine 12
TNR tenascin R
TNRC6B trinucleotide repeat containing 6B
TRAF3 TNF receptor-associated factor 3
TREH trehalase (brush-border membrane glycoprotein)
TRIM66 tripartite motif containing 66
TSC1 tuberous sclerosis 1
TSPO2 translocator protein 2
TSSK4 testis-specific serine kinase 4
TTTY10 testis-specific transcript, Y-linked 10 (non-protein coding)
UBR2 ubiquitin protein ligase E3 component n-recognin 2
UCKL1-AS1 UCKL1 antisense RNA 1
USP34 ubiquitin specific peptidase 34
USP43 ubiquitin specific peptidase 43
USP49 ubiquitin specific peptidase 49
USP6 ubiquitin specific peptidase 6
VN1R4 vomeronasal 1 receptor 4
VPS13A vacuolar protein sorting 13 homolog A (S. cerevisiae)
WFDC11 WAP four-disulfide core domain 11
XPO4 exportin 4
ZBTB20 zinc finger and BTB domain containing 20
ZBTB37 zinc finger and BTB domain containing 37
ZC2HC1B zinc finger, C2HC-type containing 1B
ZC3H12B zinc finger CCCH-type containing 12B
ZNF192P1 zinc finger protein 192 pseudogene 1
ZNF208 zinc finger protein 208
ZNF232 zinc finger protein 232
ZNF33B zinc finger protein 33B
ZNF37BP zinc finger protein 37B, pseudogene
ZNF660 zinc finger protein 660
ZNF827 zinc finger protein 827
ZNF99 zinc finger protein 99
ZSCAN12P1 zinc finger and SCAN domain containing 12 pseudogene 1
ZSCAN23 zinc finger and SCAN domain containing 23
ZZEF1 zinc finger, ZZ-type with EF-hand domain 1