Brain Lower Grade Glioma_LGG_TCGA-FG-A60J-01A-11R-A28M-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

284 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-FG-A60J-01A-11R-A28M-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AADACL3 arylacetamide deacetylase-like 3
ABI3BP ABI family, member 3 (NESH) binding protein
ACER1 alkaline ceramidase 1
ACOX1 acyl-CoA oxidase 1, palmitoyl
ACTC1 actin, alpha, cardiac muscle 1
ACTL8 actin-like 8
ADAMTS19 ADAM metallopeptidase with thrombospondin type 1 motif, 19
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6
ADGRA3 adhesion G protein-coupled receptor A3
ADIPOQ adiponectin, C1Q and collagen domain containing
AHDC1 AT hook, DNA binding motif, containing 1
AIF1L allograft inflammatory factor 1-like
AJAP1 adherens junctions associated protein 1
ALX3 ALX homeobox 3
ANKRD30A ankyrin repeat domain 30A
ANKRD35 ankyrin repeat domain 35
ANKRD36B ankyrin repeat domain 36B
ANO7 anoctamin 7
AP5S1 adaptor-related protein complex 5, sigma 1 subunit
APBA2 amyloid beta (A4) precursor protein-binding, family A, member 2
AQP4-AS1 AQP4 antisense RNA 1
ARSB arylsulfatase B
ARSH arylsulfatase family, member H
ASAH2 N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2
ASB17 ankyrin repeat and SOCS box containing 17
ATOH8 atonal homolog 8 (Drosophila)
BOC BOC cell adhesion associated, oncogene regulated
BRDT bromodomain, testis-specific
C10ORF32 chromosome 10 open reading frame 32
C16ORF78 chromosome 16 open reading frame 78
C17ORF82 chromosome 17 open reading frame 82
C1ORF146 chromosome 1 open reading frame 146
C1ORF204 chromosome 1 open reading frame 204
C1QL2 complement component 1, q subcomponent-like 2
C2ORF57 chromosome 2 open reading frame 57
C2ORF78 chromosome 2 open reading frame 78
C5ORF38 chromosome 5 open reading frame 38
CA8 carbonic anhydrase VIII
CACHD1 cache domain containing 1
CALN1 calneuron 1
CAPZA3 capping protein (actin filament) muscle Z-line, alpha 3
CASKIN2 CASK interacting protein 2
CATSPER4 cation channel, sperm associated 4
CATSPERG catsper channel auxiliary subunit gamma
CCDC62 coiled-coil domain containing 62
CCL4L2 chemokine (C-C motif) ligand 4-like 2
CCT8L2 chaperonin containing TCP1, subunit 8 (theta)-like 2
CD38 CD38 molecule
CEACAM20 carcinoembryonic antigen-related cell adhesion molecule 20
CHMP6 charged multivesicular body protein 6
CLTCL1 clathrin, heavy chain-like 1
COIL coilin
COMP cartilage oligomeric matrix protein
CRYBG3 beta-gamma crystallin domain containing 3
CSAD cysteine sulfinic acid decarboxylase
CSNK1D casein kinase 1, delta
CSPG4 chondroitin sulfate proteoglycan 4
CSRNP1 cysteine-serine-rich nuclear protein 1
CTSH cathepsin H
CUEDC1 CUE domain containing 1
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1
CYP4F12 cytochrome P450, family 4, subfamily F, polypeptide 12
CYP4F3 cytochrome P450, family 4, subfamily F, polypeptide 3
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5
DEFB126 defensin, beta 126
DHX40 DEAH (Asp-Glu-Ala-His) box polypeptide 40
DKFZP779M0652 uncharacterized DKFZp779M0652
DNAJB3 DnaJ (Hsp40) homolog, subfamily B, member 3
DNAJB7 DnaJ (Hsp40) homolog, subfamily B, member 7
DUOXA1 dual oxidase maturation factor 1
DUSP5P1 dual specificity phosphatase 5 pseudogene 1
EAF2 ELL associated factor 2
EDAR ectodysplasin A receptor
ELN elastin
EXOC7 exocyst complex component 7
FAM198A family with sequence similarity 198, member A
FAM209A family with sequence similarity 209, member A
FAM212B family with sequence similarity 212, member B
FCAR Fc fragment of IgA receptor
FN3KRP fructosamine 3 kinase related protein
FOXD4L5 forkhead box D4-like 5
FOXI2 forkhead box I2
FSTL4 follistatin-like 4
FUT6 fucosyltransferase 6 (alpha (1,3) fucosyltransferase)
GADD45G growth arrest and DNA-damage-inducible, gamma
GAGE12J G antigen 12J
GAL3ST2 galactose-3-O-sulfotransferase 2
GCOM1 GRINL1A complex locus 1
GDF2 growth differentiation factor 2
GDPD1 glycerophosphodiester phosphodiesterase domain containing 1
GFRAL GDNF family receptor alpha like
GJA10 gap junction protein, alpha 10, 62kDa
GJB7 gap junction protein, beta 7, 25kDa
GJD2 gap junction protein, delta 2, 36kDa
GLIS1 GLIS family zinc finger 1
GOLGA6C golgin A6 family, member C
GPLD1 glycosylphosphatidylinositol specific phospholipase D1
GPRC5C G protein-coupled receptor, class C, group 5, member C
GSC2 goosecoid homeobox 2
GSG1L GSG1-like
GTF2A1L general transcription factor IIA, 1-like
H3F3B H3 histone, family 3B (H3.3B)
H3F3C H3 histone, family 3C
HIGD2B HIG1 hypoxia inducible domain family, member 2B
HIST1H4D histone cluster 1, H4d
HIST1H4J histone cluster 1, H4j
HIST1H4K histone cluster 1, H4k
HIST3H2A histone cluster 3, H2a
HIST3H2BB histone cluster 3, H2bb
HSF5 heat shock transcription factor family member 5
HSFY1P1 heat shock transcription factor, Y-linked 1 pseudogene 1
IGSF21 immunoglobin superfamily, member 21
ITGB4 integrin, beta 4
JUN jun proto-oncogene
KAAG1 kidney associated antigen 1
KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
KRT5 keratin 5, type II
KRT74 keratin 74, type II
KRTAP11-1 keratin associated protein 11-1
KRTAP4-3 keratin associated protein 4-3
KRTAP7-1 keratin associated protein 7-1 (gene/pseudogene)
LIMD1 LIM domains containing 1
LINC00235 long intergenic non-protein coding RNA 235
LINC00244 long intergenic non-protein coding RNA 244
LINC00301 long intergenic non-protein coding RNA 301
LINC00483 long intergenic non-protein coding RNA 483
LMF1 lipase maturation factor 1
LOC100268168 uncharacterized LOC100268168
LOC285593 uncharacterized LOC285593
LRIT2 leucine-rich repeat, immunoglobulin-like and transmembrane domains 2
LUZP2 leucine zipper protein 2
MAGEB6 melanoma antigen family B6
MEF2BNB-MEF2B MEF2BNB-MEF2B readthrough
MFI2 antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5
MGC16275 uncharacterized protein MGC16275
MT1F metallothionein 1F
MYF5 myogenic factor 5
MYH6 myosin, heavy chain 6, cardiac muscle, alpha
NFIB nuclear factor I/B
NFIX nuclear factor I/X (CCAAT-binding transcription factor)
NPLOC4 nuclear protein localization 4 homolog (S. cerevisiae)
NR1H4 nuclear receptor subfamily 1, group H, member 4
NR2F1 nuclear receptor subfamily 2, group F, member 1
NRG2 neuregulin 2
NT5C1A 5'-nucleotidase, cytosolic IA
OGFOD3 2-oxoglutarate and iron-dependent oxygenase domain containing 3
OR1L4 olfactory receptor, family 1, subfamily L, member 4
OR2AK2 olfactory receptor, family 2, subfamily AK, member 2
OR2AT4 olfactory receptor, family 2, subfamily AT, member 4
OR51M1 olfactory receptor, family 51, subfamily M, member 1
OR52A1 olfactory receptor, family 52, subfamily A, member 1
OR52I2 olfactory receptor, family 52, subfamily I, member 2
OTUD6A OTU deubiquitinase 6A
PAQR4 progestin and adipoQ receptor family member IV
PCDHA13 protocadherin alpha 13
PCDHA7 protocadherin alpha 7
PCDHB9 protocadherin beta 9
PCDHGA1 protocadherin gamma subfamily A, 1
PCDHGB2 protocadherin gamma subfamily B, 2
PDDC1 Parkinson disease 7 domain containing 1
PDZRN4 PDZ domain containing ring finger 4
PER1 period circadian clock 1
PER3 period circadian clock 3
PEX10 peroxisomal biogenesis factor 10
PGLYRP2 peptidoglycan recognition protein 2
PI15 peptidase inhibitor 15
PLEC plectin
PLEKHF1 pleckstrin homology domain containing, family F (with FYVE domain) member 1
PLXNA3 plexin A3
PNMA1 paraneoplastic Ma antigen 1
POF1B premature ovarian failure, 1B
POLN polymerase (DNA directed) nu
POM121L1P POM121 transmembrane nucleoporin-like 1, pseudogene
POU5F1B POU class 5 homeobox 1B
PPIF peptidylprolyl isomerase F
PRAMEF8 PRAME family member 8
PRKCA protein kinase C, alpha
PRO0611 PRO0611 protein
PROL1 proline rich, lacrimal 1
PRPSAP1 phosphoribosyl pyrophosphate synthetase-associated protein 1
PRR32 proline rich 32
PSCA prostate stem cell antigen
PTCHD2 patched domain containing 2
PTPN23 protein tyrosine phosphatase, non-receptor type 23
RABGGTB Rab geranylgeranyltransferase, beta subunit
RASL12 RAS-like, family 12
RAVER2 ribonucleoprotein, PTB-binding 2
RCC1 regulator of chromosome condensation 1
RELN reelin
RET ret proto-oncogene
RFX5 regulatory factor X, 5 (influences HLA class II expression)
RGPD8 RANBP2-like and GRIP domain containing 8
RHOB ras homolog family member B
RHOU ras homolog family member U
RLN1 relaxin 1
RPL36A ribosomal protein L36a
RPTOR regulatory associated protein of MTOR, complex 1
S100A1 S100 calcium binding protein A1
SCAND2P SCAN domain containing 2 pseudogene
SCGB2B2 secretoglobin, family 2B, member 2
SDR9C7 short chain dehydrogenase/reductase family 9C, member 7
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
SGK1 serum/glucocorticoid regulated kinase 1
SH3RF3 SH3 domain containing ring finger 3
SIDT1 SID1 transmembrane family, member 1
SKA2 spindle and kinetochore associated complex subunit 2
SLC12A4 solute carrier family 12 (potassium/chloride transporter), member 4
SLC22A3 solute carrier family 22 (organic cation transporter), member 3
SLC25A52 solute carrier family 25, member 52
SLC26A11 solute carrier family 26 (anion exchanger), member 11
SLC38A1 solute carrier family 38, member 1
SLC9A3R1 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1
SMG8 SMG8 nonsense mediated mRNA decay factor
SMOC1 SPARC related modular calcium binding 1
SNORA2A small nucleolar RNA, H/ACA box 2A
SNORA52 small nucleolar RNA, H/ACA box 52
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
SORD sorbitol dehydrogenase
SP2 Sp2 transcription factor
SPACA1 sperm acrosome associated 1
SPANXN2 SPANX family, member N2
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1
SSTR5 somatostatin receptor 5
ST20-AS1 ST20 antisense RNA 1
SYS1 Sys1 golgi trafficking protein
SYT8 synaptotagmin VIII
TAS2R50 taste receptor, type 2, member 50
TDRD12 tudor domain containing 12
TESK2 testis-specific kinase 2
TEX13B testis expressed 13B
TFAMP1 transcription factor A, mitochondrial pseudogene 1
TJP2 tight junction protein 2
TMEM200C transmembrane protein 200C
TMEM236 transmembrane protein 236
TMEM254 transmembrane protein 254
TNFSF18 tumor necrosis factor (ligand) superfamily, member 18
TOX thymocyte selection-associated high mobility group box
TRIM47 tripartite motif containing 47
TRIM65 tripartite motif containing 65
TTLL2 tubulin tyrosine ligase-like family member 2
TTN titin
TTPA tocopherol (alpha) transfer protein
UBL4B ubiquitin-like 4B
UGT1A10 UDP glucuronosyltransferase 1 family, polypeptide A10
UGT1A6 UDP glucuronosyltransferase 1 family, polypeptide A6
UNK unkempt family zinc finger
UST uronyl-2-sulfotransferase
WBP2 WW domain binding protein 2
WDR45B WD repeat domain 45B
WWC1 WW and C2 domain containing 1
YIPF7 Yip1 domain family, member 7
ZFPM2 zinc finger protein, FOG family member 2
ZG16B zymogen granule protein 16B
ZMIZ1 zinc finger, MIZ-type containing 1
ZNF497 zinc finger protein 497
ZNF543 zinc finger protein 543
ZNF576 zinc finger protein 576
ZNF582 zinc finger protein 582
ZNF628 zinc finger protein 628
ZNRD1-AS1 ZNRD1 antisense RNA 1
ZNRF4 zinc and ring finger 4

low expression

Symbol Name
ALG5 ALG5, dolichyl-phosphate beta-glucosyltransferase
CCDC73 coiled-coil domain containing 73
CCT8 chaperonin containing TCP1, subunit 8 (theta)
CDC16 cell division cycle 16
COG3 component of oligomeric golgi complex 3
DSCR3 Down syndrome critical region 3
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A
EIF3M eukaryotic translation initiation factor 3, subunit M
GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase
IFNAR1 interferon (alpha, beta and omega) receptor 1
IPO5 importin 5
MCM3AP minichromosome maintenance complex component 3 associated protein
MED4 mediator complex subunit 4
MRPL39 mitochondrial ribosomal protein L39
MTIF3 mitochondrial translational initiation factor 3
PCID2 PCI domain containing 2
PSMG1 proteasome (prosome, macropain) assembly chaperone 1
SAP18 Sin3A-associated protein, 18kDa
SCAF4 SR-related CTD-associated factor 4
TMEM50B transmembrane protein 50B
UCHL3 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)
UFM1 ubiquitin-fold modifier 1
ZMYM2 zinc finger, MYM-type 2