Brain Lower Grade Glioma_LGG_TCGA-FG-5964-01A-11R-1708-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

202 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-FG-5964-01A-11R-1708-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AATF apoptosis antagonizing transcription factor
ABHD12 abhydrolase domain containing 12
ACAT2 acetyl-CoA acetyltransferase 2
ACR acrosin
AKR7A3 aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase)
ALG1L2 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like 2
ALPL alkaline phosphatase, liver/bone/kidney
AMICA1 adhesion molecule, interacts with CXADR antigen 1
ANGPTL6 angiopoietin-like 6
ANKRD39 ankyrin repeat domain 39
ANO7 anoctamin 7
APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1
APOBR apolipoprotein B receptor
APOC1 apolipoprotein C-I
APOC2 apolipoprotein C-II
ARMS2 age-related maculopathy susceptibility 2
BAALC-AS2 BAALC antisense RNA 2
BPIFA1 BPI fold containing family A, member 1
BRD9 bromodomain containing 9
BSND barttin CLCNK-type chloride channel accessory beta subunit
BSPRY B-box and SPRY domain containing
C12ORF56 chromosome 12 open reading frame 56
C17ORF74 chromosome 17 open reading frame 74
C17ORF99 chromosome 17 open reading frame 99
C19ORF45 chromosome 19 open reading frame 45
C1ORF68 chromosome 1 open reading frame 68
CAMK2N2 calcium/calmodulin-dependent protein kinase II inhibitor 2
CCDC101 coiled-coil domain containing 101
CCL24 chemokine (C-C motif) ligand 24
CD163L1 CD163 molecule-like 1
CD209 CD209 molecule
CD5L CD5 molecule-like
CELA1 chymotrypsin-like elastase family, member 1
CFP complement factor properdin
CHRNA2 cholinergic receptor, nicotinic, alpha 2 (neuronal)
CHST13 carbohydrate (chondroitin 4) sulfotransferase 13
CIDEC cell death-inducing DFFA-like effector c
CLEC10A C-type lectin domain family 10, member A
CLEC4A C-type lectin domain family 4, member A
CNBD2 cyclic nucleotide binding domain containing 2
CNNM3 cyclin and CBS domain divalent metal cation transport mediator 3
COX6A2 cytochrome c oxidase subunit VIa polypeptide 2
CST5 cystatin D
CTRB2 chymotrypsinogen B2
CYC1 cytochrome c-1
CYP7A1 cytochrome P450, family 7, subfamily A, polypeptide 1
DBIL5P diazepam binding inhibitor-like 5, pseudogene
DEFB131 defensin, beta 131
DGAT1 diacylglycerol O-acyltransferase 1
DKFZP434H168 uncharacterized LOC26077
DNAJB12 DnaJ (Hsp40) homolog, subfamily B, member 12
DNAJC7 DnaJ (Hsp40) homolog, subfamily C, member 7
DNASE1L3 deoxyribonuclease I-like 3
DPPA5 developmental pluripotency associated 5
DSCR8 Down syndrome critical region 8
EBP emopamil binding protein (sterol isomerase)
EIF3CL eukaryotic translation initiation factor 3, subunit C-like
ELMO1 engulfment and cell motility 1
ERN2 endoplasmic reticulum to nucleus signaling 2
FAM21A family with sequence similarity 21, member A
FAM3B family with sequence similarity 3, member B
FBXO2 F-box protein 2
FCMR Fc fragment of IgM receptor
FGFBP3 fibroblast growth factor binding protein 3
FGR FGR proto-oncogene, Src family tyrosine kinase
FXYD7 FXYD domain containing ion transport regulator 7
GFRA4 GDNF family receptor alpha 4
GFRAL GDNF family receptor alpha like
GH1 growth hormone 1
GJB5 gap junction protein, beta 5, 31.1kDa
GPR143 G protein-coupled receptor 143
HAND1 heart and neural crest derivatives expressed 1
HIST1H2BL histone cluster 1, H2bl
HLA-DRB5 major histocompatibility complex, class II, DR beta 5
HR hair growth associated
IDI2-AS1 IDI2 antisense RNA 1
IFNA21 interferon, alpha 21
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
IL17C interleukin 17C
IMP4 IMP4, U3 small nucleolar ribonucleoprotein
INE2 inactivation escape 2 (non-protein coding)
INO80C INO80 complex subunit C
ITGB7 integrin, beta 7
ITM2C integral membrane protein 2C
ITPK1 inositol-tetrakisphosphate 1-kinase
KAT5 K(lysine) acetyltransferase 5
KDM8 lysine (K)-specific demethylase 8
KIAA0141 KIAA0141
KRT36 keratin 36, type I
KRTAP11-1 keratin associated protein 11-1
KRTAP5-11 keratin associated protein 5-11
LAG3 lymphocyte-activation gene 3
LASP1 LIM and SH3 protein 1
LILRA4 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4
LILRB5 leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5
LINC00167 long intergenic non-protein coding RNA 167
LINC00207 long intergenic non-protein coding RNA 207
LINC00242 long intergenic non-protein coding RNA 242
LIPC lipase, hepatic
LOC440173 uncharacterized LOC440173
LOC643486
LOC653786 otoancorin pseudogene
LRRC39 leucine rich repeat containing 39
LRRC3B leucine rich repeat containing 3B
MDS2 myelodysplastic syndrome 2 translocation associated
MFGE8 milk fat globule-EGF factor 8 protein
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type
MPEG1 macrophage expressed 1
MPO myeloperoxidase
MPP1 membrane protein, palmitoylated 1, 55kDa
MTNR1A melatonin receptor 1A
MVK mevalonate kinase
MYF6 myogenic factor 6 (herculin)
MYH4 myosin, heavy chain 4, skeletal muscle
MYOZ1 myozenin 1
NAP1L1 nucleosome assembly protein 1-like 1
NHEJ1 nonhomologous end-joining factor 1
NKAIN1 Na+/K+ transporting ATPase interacting 1
NKX3-1 NK3 homeobox 1
NOB1 NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
NONO non-POU domain containing, octamer-binding
NPPA natriuretic peptide A
NSDHL NAD(P) dependent steroid dehydrogenase-like
NUBP1 nucleotide binding protein 1
OLMALINC oligodendrocyte maturation-associated long intergenic non-coding RNA
OR2AG2 olfactory receptor, family 2, subfamily AG, member 2
OXA1L oxidase (cytochrome c) assembly 1-like
PA2G4 proliferation-associated 2G4, 38kDa
PABPC1 poly(A) binding protein, cytoplasmic 1
PACS1 phosphofurin acidic cluster sorting protein 1
PCBP4 poly(rC) binding protein 4
PCDHGA9 protocadherin gamma subfamily A, 9
PDE6G phosphodiesterase 6G, cGMP-specific, rod, gamma
PDZK1IP1 PDZK1 interacting protein 1
POMC proopiomelanocortin
PPP1R11 protein phosphatase 1, regulatory (inhibitor) subunit 11
PRSS21 protease, serine, 21 (testisin)
PSMA8 proteasome (prosome, macropain) subunit, alpha type, 8
PSTK phosphoseryl-tRNA kinase
PTCRA pre T-cell antigen receptor alpha
PVALB parvalbumin
RGPD8 RANBP2-like and GRIP domain containing 8
RILP Rab interacting lysosomal protein
RLBP1 retinaldehyde binding protein 1
RNF113A ring finger protein 113A
RPGRIP1 retinitis pigmentosa GTPase regulator interacting protein 1
S100A5 S100 calcium binding protein A5
SCARB1 scavenger receptor class B, member 1
SCARNA8 small Cajal body-specific RNA 8
SERGEF secretion regulating guanine nucleotide exchange factor
SF3A2 splicing factor 3a, subunit 2, 66kDa
SF3B4 splicing factor 3b, subunit 4, 49kDa
SFTA1P surfactant associated 1, pseudogene
SIGLEC16 sialic acid binding Ig-like lectin 16 (gene/pseudogene)
SLAMF7 SLAM family member 7
SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6
SLC9A3R2 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2
SNX22 sorting nexin 22
SPATA45 spermatogenesis associated 45
SPATA7 spermatogenesis associated 7
SRC SRC proto-oncogene, non-receptor tyrosine kinase
STARD6 StAR-related lipid transfer (START) domain containing 6
STX19 syntaxin 19
TAC3 tachykinin 3
TACC2 transforming, acidic coiled-coil containing protein 2
TAS2R43 taste receptor, type 2, member 43
TAS2R60 taste receptor, type 2, member 60
TBATA thymus, brain and testes associated
TBC1D21 TBC1 domain family, member 21
THEM6 thioesterase superfamily member 6
THOC6 THO complex 6
TKT transketolase
TMEM18 transmembrane protein 18
TMEM97 transmembrane protein 97
TNNT1 troponin T type 1 (skeletal, slow)
TRAPPC3L trafficking protein particle complex 3-like
TRAPPC9 trafficking protein particle complex 9
TRIM26 tripartite motif containing 26
TRPM1 transient receptor potential cation channel, subfamily M, member 1
TTTY6B testis-specific transcript, Y-linked 6B (non-protein coding)
YY1AP1 YY1 associated protein 1
ZC3H3 zinc finger CCCH-type containing 3
ZNF16 zinc finger protein 16
ZNRF4 zinc and ring finger 4

low expression

Symbol Name
ATF1 activating transcription factor 1
GUF1 GUF1 GTPase homolog (S. cerevisiae)
HAUS3 HAUS augmin-like complex, subunit 3
OTUD4 OTU deubiquitinase 4
OTUD6B OTU domain containing 6B
PEX13 peroxisomal biogenesis factor 13
PRMT9 protein arginine methyltransferase 9
RAB28 RAB28, member RAS oncogene family
RANBP6 RAN binding protein 6
RBM26 RNA binding motif protein 26
RCHY1 ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase
SMIM14 small integral membrane protein 14
THAP5 THAP domain containing 5
TMEM33 transmembrane protein 33
UBA6 ubiquitin-like modifier activating enzyme 6
UBE2D3 ubiquitin-conjugating enzyme E2D 3
UTP3 UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)
YTHDF3 YTH N(6)-methyladenosine RNA binding protein 3