Brain Lower Grade Glioma_LGG_TCGA-E1-5305-01A-01R-1896-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

308 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-E1-5305-01A-01R-1896-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABHD4 abhydrolase domain containing 4
ACVR2B activin A receptor, type IIB
ADNP2 ADNP homeobox 2
AGO1 argonaute RISC catalytic component 1
AGO2 argonaute RISC catalytic component 2
AKAP6 A kinase (PRKA) anchor protein 6
ALDH3A2 aldehyde dehydrogenase 3 family, member A2
AMIGO1 adhesion molecule with Ig-like domain 1
ANKRD36BP1 ankyrin repeat domain 36B pseudogene 1
APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1
ARHGAP32 Rho GTPase activating protein 32
ARHGAP5 Rho GTPase activating protein 5
ASB7 ankyrin repeat and SOCS box containing 7
ASCC1 activating signal cointegrator 1 complex subunit 1
ASXL3 additional sex combs like transcriptional regulator 3
ATE1 arginyltransferase 1
ATF7 activating transcription factor 7
ATXN7L3B ataxin 7-like 3B
AVL9 AVL9 homolog (S. cerevisiase)
AZIN1 antizyme inhibitor 1
BCL7A B-cell CLL/lymphoma 7A
BCYRN1 brain cytoplasmic RNA 1
BHLHA15 basic helix-loop-helix family, member a15
BMPR1A bone morphogenetic protein receptor, type IA
BRMS1L breast cancer metastasis-suppressor 1-like
C10ORF2 chromosome 10 open reading frame 2
C12ORF43 chromosome 12 open reading frame 43
C12ORF49 chromosome 12 open reading frame 49
C12ORF66 chromosome 12 open reading frame 66
C15ORF57 chromosome 15 open reading frame 57
C17ORF78 chromosome 17 open reading frame 78
C1ORF210 chromosome 1 open reading frame 210
C7ORF60 chromosome 7 open reading frame 60
C9ORF84 chromosome 9 open reading frame 84
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1
CALCRL calcitonin receptor-like
CAND1 cullin-associated and neddylation-dissociated 1
CBLB Cbl proto-oncogene B, E3 ubiquitin protein ligase
CBX5 chromobox homolog 5
CCDC169 coiled-coil domain containing 169
CCNB1IP1 cyclin B1 interacting protein 1, E3 ubiquitin protein ligase
CDC42SE2 CDC42 small effector 2
CDH7 cadherin 7, type 2
CDON cell adhesion associated, oncogene regulated
CDR1 cerebellar degeneration-related protein 1, 34kDa
CDS2 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
CEBPE CCAAT/enhancer binding protein (C/EBP), epsilon
CERS3 ceramide synthase 3
CFL2 cofilin 2 (muscle)
CHD8 chromodomain helicase DNA binding protein 8
CHMP3 charged multivesicular body protein 3
CHRNG cholinergic receptor, nicotinic, gamma (muscle)
CIRH1A cirrhosis, autosomal recessive 1A (cirhin)
CMA1 chymase 1, mast cell
COLGALT2 collagen beta(1-O)galactosyltransferase 2
COQ5 coenzyme Q5 homolog, methyltransferase (S. cerevisiae)
CREB1 cAMP responsive element binding protein 1
CRNKL1 crooked neck pre-mRNA splicing factor 1
CRYZL1 crystallin, zeta (quinone reductase)-like 1
CSRNP3 cysteine-serine-rich nuclear protein 3
CTH cystathionine gamma-lyase
CTNNBIP1 catenin, beta interacting protein 1
CYMP chymosin pseudogene
DCAF11 DDB1 and CUL4 associated factor 11
DCT dopachrome tautomerase
DDB1 damage-specific DNA binding protein 1, 127kDa
DHRS4-AS1 DHRS4 antisense RNA 1
DHX37 DEAH (Asp-Glu-Ala-His) box polypeptide 37
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila)
DNAJC18 DnaJ (Hsp40) homolog, subfamily C, member 18
DTD2 D-tyrosyl-tRNA deacylase 2 (putative)
DUSP11 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
DYTN dystrotelin
EAPP E2F-associated phosphoprotein
EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2
F2R coagulation factor II (thrombin) receptor
FAM171B family with sequence similarity 171, member B
FAM177A1 family with sequence similarity 177, member A1
FAM205BP transmembrane protein C9orf144B pseudogene
FAM45B family with sequence similarity 45, member A pseudogene
FAM53C family with sequence similarity 53, member C
FAM57A family with sequence similarity 57, member A
FAM71B family with sequence similarity 71, member B
FBXL5 F-box and leucine-rich repeat protein 5
FBXO21 F-box protein 21
FBXO36 F-box protein 36
FBXW8 F-box and WD repeat domain containing 8
FEM1B fem-1 homolog b (C. elegans)
FEM1C fem-1 homolog c (C. elegans)
FUT10 fucosyltransferase 10 (alpha (1,3) fucosyltransferase)
GCN1L1 GCN1 general control of amino-acid synthesis 1-like 1 (yeast)
GLO1 glyoxalase I
GMPR2 guanosine monophosphate reductase 2
GPR137B G protein-coupled receptor 137B
GREB1L growth regulation by estrogen in breast cancer-like
GSPT1 G1 to S phase transition 1
GTF2H3 general transcription factor IIH, polypeptide 3, 34kDa
HAUS4 HAUS augmin-like complex, subunit 4
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1
HIST1H1T histone cluster 1, H1t
HIST1H2AB histone cluster 1, H2ab
HIST1H2AC histone cluster 1, H2ac
HIST1H2BC histone cluster 1, H2bc
HIST1H2BD histone cluster 1, H2bd
HIST1H2BE histone cluster 1, H2be
HIST1H2BF histone cluster 1, H2bf
HIST2H3C histone cluster 2, H3c
HIST2H4A histone cluster 2, H4a
HMGB3P1 high mobility group box 3 pseudogene 1
HRK harakiri, BCL2 interacting protein
HULC hepatocellular carcinoma up-regulated long non-coding RNA
HUS1B HUS1 checkpoint homolog b (S. pombe)
IL6ST interleukin 6 signal transducer
IPMK inositol polyphosphate multikinase
IPO11 importin 11
ISX intestine-specific homeobox
KATNAL1 katanin p60 subunit A-like 1
KBTBD7 kelch repeat and BTB (POZ) domain containing 7
KCTD20 potassium channel tetramerization domain containing 20
KDM3B lysine (K)-specific demethylase 3B
KIAA0196 KIAA0196
KIAA0391 KIAA0391
KIAA1147 KIAA1147
KIAA1429 KIAA1429
KIAA1715 KIAA1715
KLHL28 kelch-like family member 28
KLHL8 kelch-like family member 8
KPNA3 karyopherin alpha 3 (importin alpha 4)
LIFR leukemia inhibitory factor receptor alpha
LINC00051 long intergenic non-protein coding RNA 51
LINC00597 long intergenic non-protein coding RNA 597
LOC285627 uncharacterized LOC285627
LONP2 lon peptidase 2, peroxisomal
LRIG1 leucine-rich repeats and immunoglobulin-like domains 1
LRP12 low density lipoprotein receptor-related protein 12
LRRC58 leucine rich repeat containing 58
LUZP4 leucine zipper protein 4
LY6K lymphocyte antigen 6 complex, locus K
MAPK6 mitogen-activated protein kinase 6
MBIP MAP3K12 binding inhibitory protein 1
MBOAT2 membrane bound O-acyltransferase domain containing 2
MBTPS2 membrane-bound transcription factor peptidase, site 2
MED13L mediator complex subunit 13-like
MFNG MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
MIB1 mindbomb E3 ubiquitin protein ligase 1
MLEC malectin
MOCS1 molybdenum cofactor synthesis 1
MRPL19 mitochondrial ribosomal protein L19
MSTN myostatin
MTAP methylthioadenosine phosphorylase
MTM1 myotubularin 1
MUT methylmalonyl CoA mutase
MXI1 MAX interactor 1, dimerization protein
NAV2 neuron navigator 2
NBAS neuroblastoma amplified sequence
NDNF neuron-derived neurotrophic factor
NEU1 sialidase 1 (lysosomal sialidase)
NHLRC2 NHL repeat containing 2
NID1 nidogen 1
NMD3 NMD3 ribosome export adaptor
NOC3L nucleolar complex associated 3 homolog (S. cerevisiae)
NOP9 NOP9 nucleolar protein
NRAS neuroblastoma RAS viral (v-ras) oncogene homolog
NRIP1 nuclear receptor interacting protein 1
NUDCD1 NudC domain containing 1
NXT2 nuclear transport factor 2-like export factor 2
OGFOD1 2-oxoglutarate and iron-dependent oxygenase domain containing 1
OOEP oocyte expressed protein
OR2AK2 olfactory receptor, family 2, subfamily AK, member 2
OR2D2 olfactory receptor, family 2, subfamily D, member 2
OR4K1 olfactory receptor, family 4, subfamily K, member 1
OR4K2 olfactory receptor, family 4, subfamily K, member 2
OR4K5 olfactory receptor, family 4, subfamily K, member 5
OR52B4 olfactory receptor, family 52, subfamily B, member 4 (gene/pseudogene)
OR7E91P olfactory receptor, family 7, subfamily E, member 91 pseudogene
OSGIN2 oxidative stress induced growth inhibitor family member 2
PAFAH1B2 platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)
PANK4 pantothenate kinase 4
PDPR pyruvate dehydrogenase phosphatase regulatory subunit
PECR peroxisomal trans-2-enoyl-CoA reductase
PEX19 peroxisomal biogenesis factor 19
PGRMC2 progesterone receptor membrane component 2
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
PLD6 phospholipase D family, member 6
PLET1 placenta expressed transcript 1
PPIAL4D peptidylprolyl isomerase A (cyclophilin A)-like 4D
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme
PPP2R3C protein phosphatase 2, regulatory subunit B'', gamma
PPT1 palmitoyl-protein thioesterase 1
PRKAB1 protein kinase, AMP-activated, beta 1 non-catalytic subunit
PRKD1 protein kinase D1
PRMT5 protein arginine methyltransferase 5
PSMA6 proteasome (prosome, macropain) subunit, alpha type, 6
PSMB5 proteasome (prosome, macropain) subunit, beta type, 5
PTCH1 patched 1
PUM1 pumilio RNA-binding family member 1
RAB35 RAB35, member RAS oncogene family
RAD18 RAD18 E3 ubiquitin protein ligase
RAD21 RAD21 homolog (S. pombe)
RAN RAN, member RAS oncogene family
RBBP9 retinoblastoma binding protein 9
RBM12 RNA binding motif protein 12
RBM15 RNA binding motif protein 15
RHPN1-AS1 RHPN1 antisense RNA 1 (head to head)
RICTOR RPTOR independent companion of MTOR, complex 2
RIPK2 receptor-interacting serine-threonine kinase 2
RIT1 Ras-like without CAAX 1
RLIM ring finger protein, LIM domain interacting
RMND5A required for meiotic nuclear division 5 homolog A (S. cerevisiae)
RNF139 ring finger protein 139
RNF34 ring finger protein 34, E3 ubiquitin protein ligase
RNF41 ring finger protein 41, E3 ubiquitin protein ligase
RNF5P1 ring finger protein 5, E3 ubiquitin protein ligase pseudogene 1
RQCD1 RCD1 required for cell differentiation1 homolog (S. pombe)
RRAGC Ras-related GTP binding C
RSBN1 round spermatid basic protein 1
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
SALL2 spalt-like transcription factor 2
SAMD8 sterile alpha motif domain containing 8
SBNO1 strawberry notch homolog 1 (Drosophila)
SCFD1 sec1 family domain containing 1
SEC23A Sec23 homolog A (S. cerevisiae)
SERINC5 serine incorporator 5
SERPINB10 serpin peptidase inhibitor, clade B (ovalbumin), member 10
SLC16A7 solute carrier family 16 (monocarboxylate transporter), member 7
SLITRK6 SLIT and NTRK-like family, member 6
SMAD5 SMAD family member 5
SNX11 sorting nexin 11
SNX33 sorting nexin 33
SNX6 sorting nexin 6
SPDYE2 speedy/RINGO cell cycle regulator family member E2
SPPL3 signal peptide peptidase like 3
SRP54 signal recognition particle 54kDa
STK17B serine/threonine kinase 17b
SUPT16H suppressor of Ty 16 homolog (S. cerevisiae)
SUSD5 sushi domain containing 5
TAS2R3 taste receptor, type 2, member 3
TAS2R30 taste receptor, type 2, member 30
TBC1D15 TBC1 domain family, member 15
TBPL2 TATA box binding protein like 2
TCF4 transcription factor 4
TEX37 testis expressed 37
TEX9 testis expressed 9
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2)
TMBIM6 transmembrane BAX inhibitor motif containing 6
TMED2 transmembrane emp24 domain trafficking protein 2
TMEM14E transmembrane protein 14E
TMEM45B transmembrane protein 45B
TMEM55B transmembrane protein 55B
TMLHE trimethyllysine hydroxylase, epsilon
TMPPE transmembrane protein with metallophosphoesterase domain
TNNI3K TNNI3 interacting kinase
TOX4 TOX high mobility group box family member 4
TRIM13 tripartite motif containing 13
TRIM35 tripartite motif containing 35
TRPS1 trichorhinophalangeal syndrome I
TSN translin
TSPAN14 tetraspanin 14
TTC33 tetratricopeptide repeat domain 33
TTC5 tetratricopeptide repeat domain 5
UNC119B unc-119 homolog B (C. elegans)
UTP23 UTP23, small subunit (SSU) processome component, homolog (yeast)
VPS11 vacuolar protein sorting 11 homolog (S. cerevisiae)
VPS13B vacuolar protein sorting 13 homolog B (yeast)
VPS33A vacuolar protein sorting 33 homolog A (S. cerevisiae)
WDFY1 WD repeat and FYVE domain containing 1
WDFY3-AS2 WDFY3 antisense RNA 2
WDR3 WD repeat domain 3
XPOT exportin, tRNA
XPR1 xenotropic and polytropic retrovirus receptor 1
YRDC yrdC N(6)-threonylcarbamoyltransferase domain containing
ZBTB20 zinc finger and BTB domain containing 20
ZBTB33 zinc finger and BTB domain containing 33
ZBTB39 zinc finger and BTB domain containing 39
ZC4H2 zinc finger, C4H2 domain containing
ZFR zinc finger RNA binding protein
ZNF148 zinc finger protein 148
ZNF281 zinc finger protein 281
ZNF597 zinc finger protein 597
ZNF697 zinc finger protein 697
ZSWIM5 zinc finger, SWIM-type containing 5

low expression

Symbol Name
ANAPC7 anaphase promoting complex subunit 7
ANKRD11 ankyrin repeat domain 11
ATXN2 ataxin 2
ATXN3 ataxin 3
CCDC142 coiled-coil domain containing 142
CEP290 centrosomal protein 290kDa
GOLGA2 golgin A2
LARP1 La ribonucleoprotein domain family, member 1
MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5
MED7 mediator complex subunit 7
METTL25 methyltransferase like 25
NUDCD2 NudC domain containing 2
ORAOV1 oral cancer overexpressed 1
PBX2 pre-B-cell leukemia homeobox 2
RNF44 ring finger protein 44
RUFY1 RUN and FYVE domain containing 1
SENP6 SUMO1/sentrin specific peptidase 6
SLTM SAFB-like, transcription modulator
SRSF8 serine/arginine-rich splicing factor 8
TCHP trichoplein, keratin filament binding
TCOF1 Treacher Collins-Franceschetti syndrome 1
TRIM41 tripartite motif containing 41
TSSK6 testis-specific serine kinase 6
UIMC1 ubiquitin interaction motif containing 1
ZFP62 ZFP62 zinc finger protein
ZNF785 zinc finger protein 785
ZSWIM1 zinc finger, SWIM-type containing 1