Brain Lower Grade Glioma_LGG_TCGA-E1-5302-01A-01R-1470-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

336 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-E1-5302-01A-01R-1470-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABHD4 abhydrolase domain containing 4
ACSM3 acyl-CoA synthetase medium-chain family member 3
ACSM5 acyl-CoA synthetase medium-chain family member 5
ACSM6 acyl-CoA synthetase medium-chain family member 6
ACVR1 activin A receptor, type I
ADAM21 ADAM metallopeptidase domain 21
ADGRF4 adhesion G protein-coupled receptor F4
ADRA2B adrenoceptor alpha 2B
AGMO alkylglycerol monooxygenase
AGTR2 angiotensin II receptor, type 2
ALDH9A1 aldehyde dehydrogenase 9 family, member A1
ALOX15B arachidonate 15-lipoxygenase, type B
AMFR autocrine motility factor receptor, E3 ubiquitin protein ligase
ANKIB1 ankyrin repeat and IBR domain containing 1
ANKRD22 ankyrin repeat domain 22
ANXA2P1 annexin A2 pseudogene 1
ANXA2P3 annexin A2 pseudogene 3
APH1A APH1A gamma secretase subunit
APOB apolipoprotein B
APOH apolipoprotein H (beta-2-glycoprotein I)
ARHGAP18 Rho GTPase activating protein 18
ARHGAP36 Rho GTPase activating protein 36
ARHGAP6 Rho GTPase activating protein 6
ARL4D ADP-ribosylation factor-like 4D
ARRB1 arrestin, beta 1
ASAH1 N-acylsphingosine amidohydrolase (acid ceramidase) 1
ATP12A ATPase, H+/K+ transporting, nongastric, alpha polypeptide
AXL AXL receptor tyrosine kinase
B4GALNT2 beta-1,4-N-acetyl-galactosaminyl transferase 2
BCAS3 breast carcinoma amplified sequence 3
BCL2 B-cell CLL/lymphoma 2
BCL9 B-cell CLL/lymphoma 9
BMP15 bone morphogenetic protein 15
BRD3 bromodomain containing 3
BST1 bone marrow stromal cell antigen 1
C10ORF120 chromosome 10 open reading frame 120
C10ORF76 chromosome 10 open reading frame 76
C11ORF52 chromosome 11 open reading frame 52
C14ORF105 chromosome 14 open reading frame 105
C3ORF67 chromosome 3 open reading frame 67
C7ORF60 chromosome 7 open reading frame 60
C7ORF73 chromosome 7 open reading frame 73
C9ORF84 chromosome 9 open reading frame 84
CARD6 caspase recruitment domain family, member 6
CASS4 Cas scaffolding protein family member 4
CCDC63 coiled-coil domain containing 63
CCNI cyclin I
CD36 CD36 molecule (thrombospondin receptor)
CD82 CD82 molecule
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDK15 cyclin-dependent kinase 15
CDK19 cyclin-dependent kinase 19
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15
CHST4 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4
CLASP1 cytoplasmic linker associated protein 1
CLDN8 claudin 8
CLEC16A C-type lectin domain family 16, member A
CLIP2 CAP-GLY domain containing linker protein 2
CLIP3 CAP-GLY domain containing linker protein 3
CLK2P1 CDC-like kinase 2, pseudogene 1
CLVS2 clavesin 2
CNTN5 contactin 5
COLCA1 colorectal cancer associated 1
COLCA2 colorectal cancer associated 2
CPB1 carboxypeptidase B1 (tissue)
CPM carboxypeptidase M
CPQ carboxypeptidase Q
CTCFL CCCTC-binding factor (zinc finger protein)-like
CXCR4 chemokine (C-X-C motif) receptor 4
CYB5A cytochrome b5 type A (microsomal)
DCAF12 DDB1 and CUL4 associated factor 12
DCAF8L1 DDB1 and CUL4 associated factor 8-like 1
DCK deoxycytidine kinase
DEDD death effector domain containing
DEPTOR DEP domain containing MTOR-interacting protein
DHFRL1 dihydrofolate reductase-like 1
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6
ECHDC3 enoyl CoA hydratase domain containing 3
EDARADD EDAR-associated death domain
ELAVL4 ELAV like neuron-specific RNA binding protein 4
ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)
ERC1 ELKS/RAB6-interacting/CAST family member 1
EVI2B ecotropic viral integration site 2B
EXOC4 exocyst complex component 4
EYA1 EYA transcriptional coactivator and phosphatase 1
EZR ezrin
F2RL1 coagulation factor II (thrombin) receptor-like 1
FABP12 fatty acid binding protein 12
FADS2 fatty acid desaturase 2
FAM136BP family with sequence similarity 136, member B, pseudogene
FAM175B family with sequence similarity 175, member B
FAM200A family with sequence similarity 200, member A
FAM227B family with sequence similarity 227, member B
FAM45B family with sequence similarity 45, member A pseudogene
FAM69A family with sequence similarity 69, member A
FAM92A1P2 family with sequence similarity 92, member A3
FAM9B family with sequence similarity 9, member B
FGFBP2 fibroblast growth factor binding protein 2
FLJ44635 TPT1-like protein
FMO2 flavin containing monooxygenase 2 (non-functional)
FMO3 flavin containing monooxygenase 3
FOXR1 forkhead box R1
FRMD3 FERM domain containing 3
FRMPD2 FERM and PDZ domain containing 2
FSTL5 follistatin-like 5
FUNDC2P2 FUN14 domain containing 2 pseudogene 2
FUT10 fucosyltransferase 10 (alpha (1,3) fucosyltransferase)
GABARAPL3 GABA(A) receptors associated protein like 3, pseudogene
GAS1 growth arrest-specific 1
GATAD2B GATA zinc finger domain containing 2B
GATSL2 GATS protein-like 2
GCC1 GRIP and coiled-coil domain containing 1
GMCL1P1 germ cell-less, spermatogenesis associated 1 pseudogene 1
GNA13 guanine nucleotide binding protein (G protein), alpha 13
GPR88 G protein-coupled receptor 88
GPX6 glutathione peroxidase 6
HDGFL1 hepatoma derived growth factor-like 1
HEBP1 heme binding protein 1
HLA-L major histocompatibility complex, class I, L (pseudogene)
HNMT histamine N-methyltransferase
HPR haptoglobin-related protein
HPSE2 heparanase 2 (inactive)
HSD17B11 hydroxysteroid (17-beta) dehydrogenase 11
HSP90B3P heat shock protein 90kDa beta (Grp94), member 3, pseudogene
HSPB2 heat shock 27kDa protein 2
HTR1D 5-hydroxytryptamine (serotonin) receptor 1D, G protein-coupled
HVCN1 hydrogen voltage gated channel 1
IGSF3 immunoglobulin superfamily, member 3
IL13RA1 interleukin 13 receptor, alpha 1
INSM1 insulinoma-associated 1
INTS4P2 integrator complex subunit 4 pseudogene 2
IPO11 importin 11
IRS1 insulin receptor substrate 1
KAAG1 kidney associated antigen 1
KCNN3 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 3
KCNU1 potassium channel, subfamily U, member 1
KHDC1 KH homology domain containing 1
KIAA1024 KIAA1024
KIAA2013 KIAA2013
KIF18B kinesin family member 18B
KIR3DL3 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3
KLHL8 kelch-like family member 8
KMT2E lysine (K)-specific methyltransferase 2E
KRT74 keratin 74, type II
LAPTM4A lysosomal protein transmembrane 4 alpha
LASP1 LIM and SH3 protein 1
LDLRAD4 low density lipoprotein receptor class A domain containing 4
LHFPL1 lipoma HMGIC fusion partner-like 1
LINC00238 long intergenic non-protein coding RNA 238
LINC00310 long intergenic non-protein coding RNA 310
LINC01600 long intergenic non-protein coding RNA 1600
LIPG lipase, endothelial
LMNTD1 lamin tail domain containing 1
LOC100128164 four and a half LIM domains 1 pseudogene
LOC100130331 POTE ankyrin domain family, member F pseudogene
LOC407835 mitogen-activated protein kinase kinase 2 pseudogene
LOC649330
LOC653653 adaptor-related protein complex 1, sigma 2 subunit pseudogene
LRRC3 leucine rich repeat containing 3
LRRC52 leucine rich repeat containing 52
LTBP1 latent transforming growth factor beta binding protein 1
LURAP1L leucine rich adaptor protein 1-like
LUZP6 leucine zipper protein 6
LYPD6 LY6/PLAUR domain containing 6
MALL mal, T-cell differentiation protein-like
MAP3K5 mitogen-activated protein kinase kinase kinase 5
MAPK8 mitogen-activated protein kinase 8
MAPRE1 microtubule-associated protein, RP/EB family, member 1
MARVELD3 MARVEL domain containing 3
MASP1 mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
METTL11B methyltransferase like 11B
METTL12 methyltransferase like 12
METTL13 methyltransferase like 13
MGC16275 uncharacterized protein MGC16275
MKRN1 makorin ring finger protein 1
MSTN myostatin
MT1H metallothionein 1H
MYBPC1 myosin binding protein C, slow type
NDNF neuron-derived neurotrophic factor
NF1P1 neurofibromin 1 pseudogene 1
NLRP10 NLR family, pyrin domain containing 10
NMBR neuromedin B receptor
NOX3 NADPH oxidase 3
NRCAM neuronal cell adhesion molecule
NTSR2 neurotensin receptor 2
NUDT16P1 nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1
NUP210L nucleoporin 210kDa-like
OPN1LW opsin 1 (cone pigments), long-wave-sensitive
OR13C2 olfactory receptor, family 13, subfamily C, member 2
OR13H1 olfactory receptor, family 13, subfamily H, member 1
OR1J1 olfactory receptor, family 1, subfamily J, member 1
OR1J2 olfactory receptor, family 1, subfamily J, member 2
OR1J4 olfactory receptor, family 1, subfamily J, member 4
OR4F17 olfactory receptor, family 4, subfamily F, member 17
OR4F4 olfactory receptor, family 4, subfamily F, member 4
OR4F5 olfactory receptor, family 4, subfamily F, member 5
OR4S1 olfactory receptor, family 4, subfamily S, member 1
OR4X2 olfactory receptor, family 4, subfamily X, member 2 (gene/pseudogene)
OR52E2 olfactory receptor, family 52, subfamily E, member 2
OR7A5 olfactory receptor, family 7, subfamily A, member 5
OR7C1 olfactory receptor, family 7, subfamily C, member 1
OR8U1 olfactory receptor, family 8, subfamily U, member 1
OR9Q1 olfactory receptor, family 9, subfamily Q, member 1
P2RY8 purinergic receptor P2Y, G-protein coupled, 8
PABPC1P2 poly(A) binding protein, cytoplasmic 1 pseudogene 2
PABPC3 poly(A) binding protein, cytoplasmic 3
PAPOLG poly(A) polymerase gamma
PCDHA6 protocadherin alpha 6
PEX19 peroxisomal biogenesis factor 19
PGK2 phosphoglycerate kinase 2
PHEX phosphate regulating endopeptidase homolog, X-linked
PI16 peptidase inhibitor 16
PI4KB phosphatidylinositol 4-kinase, catalytic, beta
PIWIL2 piwi-like RNA-mediated gene silencing 2
PLAC1 placenta-specific 1
PLCD1 phospholipase C, delta 1
PLCXD3 phosphatidylinositol-specific phospholipase C, X domain containing 3
PLEKHG6 pleckstrin homology domain containing, family G (with RhoGef domain) member 6
PLSCR4 phospholipid scramblase 4
PNPLA8 patatin-like phospholipase domain containing 8
POGK pogo transposable element with KRAB domain
POLE3 polymerase (DNA directed), epsilon 3, accessory subunit
POM121L10P POM121 transmembrane nucleoporin-like 10, pseudogene
PON2 paraoxonase 2
POTEE POTE ankyrin domain family, member E
POTEF POTE ankyrin domain family, member F
POTEM POTE ankyrin domain family, member M
PRKAR2A protein kinase, cAMP-dependent, regulatory, type II, alpha
PROX1 prospero homeobox 1
PRPS1L1 phosphoribosyl pyrophosphate synthetase 1-like 1
PRR15 proline rich 15
PRUNE prune exopolyphosphatase
PTEN phosphatase and tensin homolog
PTENP1 phosphatase and tensin homolog pseudogene 1 (functional)
PTTG2 pituitary tumor-transforming 2
RAB27B RAB27B, member RAS oncogene family
RAD21L1 RAD21-like 1 (S. pombe)
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2
RASL12 RAS-like, family 12
RBM18 RNA binding motif protein 18
RELN reelin
RFPL4B ret finger protein-like 4B
RFX7 regulatory factor X, 7
RNASE6 ribonuclease, RNase A family, k6
RND3 Rho family GTPase 3
RNF32 ring finger protein 32
RPE65 retinal pigment epithelium-specific protein 65kDa
RPL19P12 ribosomal protein L19 pseudogene 12
RPL23AP7 ribosomal protein L23a pseudogene 7
RPRD2 regulation of nuclear pre-mRNA domain containing 2
RRAGC Ras-related GTP binding C
S1PR1 sphingosine-1-phosphate receptor 1
S1PR3 sphingosine-1-phosphate receptor 3
SBF1P1 SET binding factor 1 pseudogene 1
SCN7A sodium channel, voltage gated, type VII alpha subunit
SELPLG selectin P ligand
SEZ6 seizure related 6 homolog (mouse)
SGPL1 sphingosine-1-phosphate lyase 1
SHPK sedoheptulokinase
SIGLEC8 sialic acid binding Ig-like lectin 8
SIGLECL1 SIGLEC family like 1
SLC16A4 solute carrier family 16, member 4
SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
SLCO1B7 solute carrier organic anion transporter family, member 1B7 (non-functional)
SLITRK6 SLIT and NTRK-like family, member 6
SNAPIN SNAP-associated protein
SNIP1 Smad nuclear interacting protein 1
SNN stannin
SNORA66 small nucleolar RNA, H/ACA box 66
SNX29 sorting nexin 29
SORD sorbitol dehydrogenase
SPANXC SPANX family, member C
SPINK1 serine peptidase inhibitor, Kazal type 1
SRD5A2 steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6
SUFU suppressor of fused homolog (Drosophila)
SULT1B1 sulfotransferase family, cytosolic, 1B, member 1
SULT1C4 sulfotransferase family, cytosolic, 1C, member 4
SUMO3 small ubiquitin-like modifier 3
SYT6 synaptotagmin VI
TAS2R1 taste receptor, type 2, member 1
TAT tyrosine aminotransferase
TBXAS1 thromboxane A synthase 1 (platelet)
TC2N tandem C2 domains, nuclear
TCAF1 TRPM8 channel-associated factor 1
TGFBR3 transforming growth factor, beta receptor III
TIAM2 T-cell lymphoma invasion and metastasis 2
TIGD2 tigger transposable element derived 2
TLR4 toll-like receptor 4
TMC1 transmembrane channel-like 1
TMEM176A transmembrane protein 176A
TPH1 tryptophan hydroxylase 1
TRIM62 tripartite motif containing 62
TSPAN14 tetraspanin 14
TSPAN33 tetraspanin 33
TSPAN8 tetraspanin 8
TXNIP thioredoxin interacting protein
UBE2H ubiquitin-conjugating enzyme E2H
UBE2NL ubiquitin-conjugating enzyme E2N-like (gene/pseudogene)
UBIAD1 UbiA prenyltransferase domain containing 1
VANGL1 VANGL planar cell polarity protein 1
VANGL2 VANGL planar cell polarity protein 2
VEPH1 ventricular zone expressed PH domain-containing 1
VGLL1 vestigial-like family member 1
VPS13D vacuolar protein sorting 13 homolog D (S. cerevisiae)
WBP11P1 WW domain binding protein 11 pseudogene 1
WDFY2 WD repeat and FYVE domain containing 2
WEE2 WEE1 homolog 2 (S. pombe)
WNT1 wingless-type MMTV integration site family, member 1
WWTR1 WW domain containing transcription regulator 1
XKRX XK, Kell blood group complex subunit-related, X-linked
XPR1 xenotropic and polytropic retrovirus receptor 1
ZDHHC3 zinc finger, DHHC-type containing 3
ZFP91-CNTF ZFP91-CNTF readthrough (NMD candidate)
ZFYVE1 zinc finger, FYVE domain containing 1
ZNF277 zinc finger protein 277
ZNF398 zinc finger protein 398
ZNF420 zinc finger protein 420
ZNF746 zinc finger protein 746

low expression

Symbol Name
BCCIP BRCA2 and CDKN1A interacting protein
BRD9 bromodomain containing 9
C11ORF58 chromosome 11 open reading frame 58
CCNL1 cyclin L1
CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa
FAR1 fatty acyl CoA reductase 1
GTF2H1 general transcription factor IIH, polypeptide 1, 62kDa
MCTS1 malignant T cell amplified sequence 1
METTL15 methyltransferase like 15
NSUN2 NOP2/Sun RNA methyltransferase family, member 2
PAIP1 poly(A) binding protein interacting protein 1
PAPD7 PAP associated domain containing 7
PDCD6 programmed cell death 6
PSMA1 proteasome (prosome, macropain) subunit, alpha type, 1
UBA5 ubiquitin-like modifier activating enzyme 5
ZNF131 zinc finger protein 131