Brain Lower Grade Glioma_LGG_TCGA-DU-6397-01A-11R-1708-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

276 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DU-6397-01A-11R-1708-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AADACL3 arylacetamide deacetylase-like 3
ABAT 4-aminobutyrate aminotransferase
ABCG1 ATP-binding cassette, sub-family G (WHITE), member 1
ABHD4 abhydrolase domain containing 4
ABHD6 abhydrolase domain containing 6
ACSBG1 acyl-CoA synthetase bubblegum family member 1
ACSL6 acyl-CoA synthetase long-chain family member 6
ACTBL2 actin, beta-like 2
ADA adenosine deaminase
ADAMDEC1 ADAM-like, decysin 1
ADGRF5 adhesion G protein-coupled receptor F5
ADGRV1 adhesion G protein-coupled receptor V1
AFAP1L2 actin filament associated protein 1-like 2
ALG11 ALG11, alpha-1,2-mannosyltransferase
AMER2 APC membrane recruitment protein 2
AMICA1 adhesion molecule, interacts with CXADR antigen 1
ANGPT4 angiopoietin 4
ANP32C acidic (leucine-rich) nuclear phosphoprotein 32 family, member C
ANP32D acidic (leucine-rich) nuclear phosphoprotein 32 family, member D
ANXA8L1 annexin A8-like 1
AP3S2 adaptor-related protein complex 3, sigma 2 subunit
APOLD1 apolipoprotein L domain containing 1
AQP6 aquaporin 6, kidney specific
ATP5EP2 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit pseudogene 2
ATP5L2 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G2
ATP9A ATPase, class II, type 9A
BET1L Bet1 golgi vesicular membrane trafficking protein-like
BMP2 bone morphogenetic protein 2
C12ORF49 chromosome 12 open reading frame 49
C14ORF37 chromosome 14 open reading frame 37
C19ORF45 chromosome 19 open reading frame 45
C2ORF83 chromosome 2 open reading frame 83
CALN1 calneuron 1
CCDC105 coiled-coil domain containing 105
CCL24 chemokine (C-C motif) ligand 24
CD163L1 CD163 molecule-like 1
CD81 CD81 molecule
CDRT15P1 CMT1A duplicated region transcript 15 pseudogene 1
CETP cholesteryl ester transfer protein, plasma
CHADL chondroadherin-like
CIT citron rho-interacting serine/threonine kinase
CLK2P1 CDC-like kinase 2, pseudogene 1
COG8 component of oligomeric golgi complex 8
COLGALT2 collagen beta(1-O)galactosyltransferase 2
COX10 COX10 heme A:farnesyltransferase cytochrome c oxidase assembly factor
CRADD CASP2 and RIPK1 domain containing adaptor with death domain
CRB1 crumbs family member 1, photoreceptor morphogenesis associated
CRB3 crumbs family member 3
CRLF2 cytokine receptor-like factor 2
CSNK1A1L casein kinase 1, alpha 1-like
CXADRP2 coxsackie virus and adenovirus receptor pseudogene 2
CXCR2P1 chemokine (C-X-C motif) receptor 2 pseudogene 1
CYP1A1 cytochrome P450, family 1, subfamily A, polypeptide 1
CYP2U1 cytochrome P450, family 2, subfamily U, polypeptide 1
DDIT4 DNA-damage-inducible transcript 4
DEFA6 defensin, alpha 6, Paneth cell-specific
DEFB132 defensin, beta 132
DENND5A DENN/MADD domain containing 5A
DGCR6 DiGeorge syndrome critical region gene 6
DGKG diacylglycerol kinase, gamma 90kDa
DISC2 disrupted in schizophrenia 2 (non-protein coding)
DNASE1L3 deoxyribonuclease I-like 3
DNMBP-AS1 DNMBP antisense RNA 1
DUSP13 dual specificity phosphatase 13
EARS2 glutamyl-tRNA synthetase 2, mitochondrial
EDARADD EDAR-associated death domain
EHD1 EH-domain containing 1
EPHB1 EPH receptor B1
EPHX1 epoxide hydrolase 1, microsomal (xenobiotic)
F5 coagulation factor V (proaccelerin, labile factor)
FAM120B family with sequence similarity 120B
FAM160A2 family with sequence similarity 160, member A2
FAM196B family with sequence similarity 196, member B
FAM219A family with sequence similarity 219, member A
FAM57A family with sequence similarity 57, member A
FAM71D family with sequence similarity 71, member D
FAM92A1P2 family with sequence similarity 92, member A3
FCRLB Fc receptor-like B
FEM1A fem-1 homolog a (C. elegans)
FGFBP3 fibroblast growth factor binding protein 3
FICD FIC domain containing
FITM2 fat storage-inducing transmembrane protein 2
FLG filaggrin
FLJ44635 TPT1-like protein
FOXF1 forkhead box F1
FOXL2NB FOXL2 neighbor
FUNDC2P2 FUN14 domain containing 2 pseudogene 2
GABRB1 gamma-aminobutyric acid (GABA) A receptor, beta 1
GAST gastrin
GDF11 growth differentiation factor 11
GHDC GH3 domain containing
GINM1 glycoprotein integral membrane 1
GLRA1 glycine receptor, alpha 1
GLUL glutamate-ammonia ligase
GPR75 G protein-coupled receptor 75
GPRIN3 GPRIN family member 3
GRIN3A glutamate receptor, ionotropic, N-methyl-D-aspartate 3A
GUF1 GUF1 GTPase homolog (S. cerevisiae)
HCAR2 hydroxycarboxylic acid receptor 2
HOGA1 4-hydroxy-2-oxoglutarate aldolase 1
HS1BP3 HCLS1 binding protein 3
HSP90AB2P heat shock protein 90kDa alpha (cytosolic), class B member 2, pseudogene
HSP90B3P heat shock protein 90kDa beta (Grp94), member 3, pseudogene
HTRA1 HtrA serine peptidase 1
IFNA21 interferon, alpha 21
IGBP1P1 immunoglobulin (CD79A) binding protein 1 pseudogene 1
KCND1 potassium channel, voltage gated Shal related subfamily D, member 1
KCNJ11 potassium channel, inwardly rectifying subfamily J, member 11
KCNN3 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 3
KCTD21 potassium channel tetramerization domain containing 21
KGFLP1 fibroblast growth factor 7 pseudogene
KIAA0141 KIAA0141
KIAA1161 KIAA1161
KIF6 kinesin family member 6
KLHL23 kelch-like family member 23
KRT38 keratin 38, type I
LARS2 leucyl-tRNA synthetase 2, mitochondrial
LHFPL1 lipoma HMGIC fusion partner-like 1
LHX5 LIM homeobox 5
LINC00593 long intergenic non-protein coding RNA 593
LOC100130331 POTE ankyrin domain family, member F pseudogene
LOC100132831 A20-binding inhibitor of NF-kappaB activation 2 pseudogene
LOC145837
LOC284441 actin-related protein 2 pseudogene
LOC344967 acyl-CoA thioesterase 7 pseudogene
LOC389332 uncharacterized LOC389332
LOC402644 peptidylprolyl isomerase A (cyclophilin A) pseudogene
LOC407835 mitogen-activated protein kinase kinase 2 pseudogene
LOC644172 mitogen-activated protein kinase 8 interacting protein 1 pseudogene
LOC649330
LPL lipoprotein lipase
LRRC14 leucine rich repeat containing 14
LRRC37A4P leucine rich repeat containing 37, member A4, pseudogene
LRRN1 leucine rich repeat neuronal 1
LRRTM3 leucine rich repeat transmembrane neuronal 3
MAOA monoamine oxidase A
MARS2 methionyl-tRNA synthetase 2, mitochondrial
MEGF11 multiple EGF-like-domains 11
MGC15885 uncharacterized protein MGC15885
MON1B MON1 secretory trafficking family member B
MPEG1 macrophage expressed 1
MRVI1 murine retrovirus integration site 1 homolog
MYO10 myosin X
NACA2 nascent polypeptide-associated complex alpha subunit 2
NAGS N-acetylglutamate synthase
NBEAP1 neurobeachin pseudogene 1
NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1
NIFK nucleolar protein interacting with the FHA domain of MKI67
NOG noggin
NUDT7 nudix (nucleoside diphosphate linked moiety X)-type motif 7
OR10A2 olfactory receptor, family 10, subfamily A, member 2
OR52A5 olfactory receptor, family 52, subfamily A, member 5
OR52E2 olfactory receptor, family 52, subfamily E, member 2
OR5AC2 olfactory receptor, family 5, subfamily AC, member 2
OR7D4 olfactory receptor, family 7, subfamily D, member 4
OSBPL5 oxysterol binding protein-like 5
OTUD7A OTU deubiquitinase 7A
P2RX3 purinergic receptor P2X, ligand gated ion channel, 3
PA2G4P4 proliferation-associated 2G4 pseudogene 4
PABPC3 poly(A) binding protein, cytoplasmic 3
PARVA parvin, alpha
PCDHA11 protocadherin alpha 11
PCDHA6 protocadherin alpha 6
PCDHB3 protocadherin beta 3
PCDHGA9 protocadherin gamma subfamily A, 9
PCDHGB4 protocadherin gamma subfamily B, 4
PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2
PDPR pyruvate dehydrogenase phosphatase regulatory subunit
PEX26 peroxisomal biogenesis factor 26
PIN1P1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1
PIP5K1P1 phosphatidylinositol-4-phosphate 5-kinase, type I, pseudogene 1
PLA2R1 phospholipase A2 receptor 1, 180kDa
PLAC1 placenta-specific 1
PNPO pyridoxamine 5'-phosphate oxidase
POMGNT2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-)
POTEB POTE ankyrin domain family, member B
POTEE POTE ankyrin domain family, member E
POTEF POTE ankyrin domain family, member F
PPARGC1B peroxisome proliferator-activated receptor gamma, coactivator 1 beta
PRPS1L1 phosphoribosyl pyrophosphate synthetase 1-like 1
PRSS30P protease, serine, 30, pseudogene
QPRT quinolinate phosphoribosyltransferase
RAB31 RAB31, member RAS oncogene family
RAB5C RAB5C, member RAS oncogene family
RAET1E retinoic acid early transcript 1E
RASSF2 Ras association (RalGDS/AF-6) domain family member 2
RIC3 RIC3 acetylcholine receptor chaperone
RIC8A RIC8 guanine nucleotide exchange factor A
RND2 Rho family GTPase 2
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila)
RPAP1 RNA polymerase II associated protein 1
RPL19P12 ribosomal protein L19 pseudogene 12
SBF1P1 SET binding factor 1 pseudogene 1
SBF2 SET binding factor 2
SCARB1 scavenger receptor class B, member 1
SELL selectin L
SETD7 SET domain containing (lysine methyltransferase) 7
SF3A1 splicing factor 3a, subunit 1, 120kDa
SH2D6 SH2 domain containing 6
SHC3 SHC (Src homology 2 domain containing) transforming protein 3
SHISA6 shisa family member 6
SHISA9 shisa family member 9
SLC14A2 solute carrier family 14 (urea transporter), member 2
SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
SLC22A6 solute carrier family 22 (organic anion transporter), member 6
SLC30A1 solute carrier family 30 (zinc transporter), member 1
SLC40A1 solute carrier family 40 (iron-regulated transporter), member 1
SLC7A6OS solute carrier family 7, member 6 opposite strand
SLIT1 slit homolog 1 (Drosophila)
SNAR-F small ILF3/NF90-associated RNA F
SNORA44 small nucleolar RNA, H/ACA box 44
SNORA45A small nucleolar RNA, H/ACA box 45A
SNORA51 small nucleolar RNA, H/ACA box 51
SNORD115-7 small nucleolar RNA, C/D box 115-7
SPEM1 spermatid maturation 1
SUGCT succinyl-CoA:glutarate-CoA transferase
TADA2B transcriptional adaptor 2B
TAF1L TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like
TAL2 T-cell acute lymphocytic leukemia 2
TBC1D14 TBC1 domain family, member 14
TBC1D21 TBC1 domain family, member 21
TG thyroglobulin
TIMM10B translocase of inner mitochondrial membrane 10 homolog B (yeast)
TIMP4 TIMP metallopeptidase inhibitor 4
TMEM253 transmembrane protein 253
TMEM9B TMEM9 domain family, member B
TMPPE transmembrane protein with metallophosphoesterase domain
TNR tenascin R
TPP1 tripeptidyl peptidase I
TPPP2 tubulin polymerization-promoting protein family member 2
TPSAB1 tryptase alpha/beta 1
TPSB2 tryptase beta 2 (gene/pseudogene)
TRAPPC9 trafficking protein particle complex 9
TREH trehalase (brush-border membrane glycoprotein)
TRIM16 tripartite motif containing 16
TRIM16L tripartite motif containing 16-like
TRIM67 tripartite motif containing 67
TRPC4 transient receptor potential cation channel, subfamily C, member 4
TSC22D1 TSC22 domain family, member 1
TSG101 tumor susceptibility 101
TSPY1 testis specific protein, Y-linked 1
TTC39B tetratricopeptide repeat domain 39B
TTLL12 tubulin tyrosine ligase-like family member 12
TTTY6B testis-specific transcript, Y-linked 6B (non-protein coding)
TUB tubby bipartite transcription factor
TUBAL3 tubulin, alpha-like 3
TYSND1 trypsin domain containing 1
UBE2NL ubiquitin-conjugating enzyme E2N-like (gene/pseudogene)
UTP14C UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)
VWA2 von Willebrand factor A domain containing 2
VWC2L von Willebrand factor C domain containing protein 2-like
WBP11P1 WW domain binding protein 11 pseudogene 1
WDPCP WD repeat containing planar cell polarity effector
WNT7B wingless-type MMTV integration site family, member 7B
XIRP2 xin actin binding repeat containing 2
XKR6 XK, Kell blood group complex subunit-related family, member 6
XKR7 XK, Kell blood group complex subunit-related family, member 7
ZDHHC3 zinc finger, DHHC-type containing 3
ZFP41 ZFP41 zinc finger protein
ZMAT3 zinc finger, matrin-type 3
ZNF219 zinc finger protein 219
ZNF385A zinc finger protein 385A
ZNF469 zinc finger protein 469

low expression

Symbol Name
AMZ2P1 archaelysin family metallopeptidase 2 pseudogene 1
BCAS2 breast carcinoma amplified sequence 2
CDC26 cell division cycle 26
DAGLB diacylglycerol lipase, beta
DUSP11 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
FAM220A family with sequence similarity 220, member A
PCNP PEST proteolytic signal containing nuclear protein
PPP6C protein phosphatase 6, catalytic subunit
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)
SNX4 sorting nexin 4
TWISTNB TWIST neighbor
WIPI2 WD repeat domain, phosphoinositide interacting 2
ZBTB34 zinc finger and BTB domain containing 34