Brain Lower Grade Glioma_LGG_TCGA-DU-5871-01A-12R-1708-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

284 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DU-5871-01A-12R-1708-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1
ACAT1 acetyl-CoA acetyltransferase 1
ACSM5 acyl-CoA synthetase medium-chain family member 5
ADHFE1 alcohol dehydrogenase, iron containing, 1
AHNAK AHNAK nucleoprotein
AKAP1 A kinase (PRKA) anchor protein 1
AKAP4 A kinase (PRKA) anchor protein 4
ALDH6A1 aldehyde dehydrogenase 6 family, member A1
ALKBH8 alkB, alkylation repair homolog 8 (E. coli)
ANGPT4 angiopoietin 4
APOA4 apolipoprotein A-IV
ARCN1 archain 1
ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)
ARHGAP31 Rho GTPase activating protein 31
ARHGAP35 Rho GTPase activating protein 35
ARHGAP39 Rho GTPase activating protein 39
ASB17 ankyrin repeat and SOCS box containing 17
ASPH aspartate beta-hydroxylase
ATM ATM serine/threonine kinase
AWAT1 acyl-CoA wax alcohol acyltransferase 1
AZGP1 alpha-2-glycoprotein 1, zinc-binding
BBS1 Bardet-Biedl syndrome 1
BCL6 B-cell CLL/lymphoma 6
BCL9L B-cell CLL/lymphoma 9-like
BLID BH3-like motif containing, cell death inducer
BTBD8 BTB (POZ) domain containing 8
C11ORF42 chromosome 11 open reading frame 42
C11ORF57 chromosome 11 open reading frame 57
C20ORF202 chromosome 20 open reading frame 202
C8ORF37 chromosome 8 open reading frame 37
C9ORF57 chromosome 9 open reading frame 57
CAB39L calcium binding protein 39-like
CAPZA3 capping protein (actin filament) muscle Z-line, alpha 3
CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
CDS2 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
CEACAM18 carcinoembryonic antigen-related cell adhesion molecule 18
CERS3 ceramide synthase 3
CLDN25 claudin 25
CLEC16A C-type lectin domain family 16, member A
CNBP CCHC-type zinc finger, nucleic acid binding protein
CNTN3 contactin 3 (plasmacytoma associated)
CPNE3 copine III
CSRP2 cysteine and glycine-rich protein 2
CWF19L2 CWF19-like 2, cell cycle control (S. pombe)
CYC1 cytochrome c-1
CYP3A7 cytochrome P450, family 3, subfamily A, polypeptide 7
CYP7A1 cytochrome P450, family 7, subfamily A, polypeptide 1
DBT dihydrolipoamide branched chain transacylase E2
DCAF12 DDB1 and CUL4 associated factor 12
DCAKD dephospho-CoA kinase domain containing
DDB1 damage-specific DNA binding protein 1, 127kDa
DDX10 DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial
DENND4C DENN/MADD domain containing 4C
DIAPH2 diaphanous-related formin 2
DIMT1 DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)
DLAT dihydrolipoamide S-acetyltransferase
DNMBP-AS1 DNMBP antisense RNA 1
DOCK11 dedicator of cytokinesis 11
DOCK8 dedicator of cytokinesis 8
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1
E2F5 E2F transcription factor 5, p130-binding
EBI3 Epstein-Barr virus induced 3
EEF1DP3 eukaryotic translation elongation factor 1 delta pseudogene 3
EIF3E eukaryotic translation initiation factor 3, subunit E
EIF3H eukaryotic translation initiation factor 3, subunit H
EMC1 ER membrane protein complex subunit 1
ERBB4 erb-b2 receptor tyrosine kinase 4
FAM168A family with sequence similarity 168, member A
FAM92A1 family with sequence similarity 92, member A1
FAM9B family with sequence similarity 9, member B
FASTKD5 FAST kinase domains 5
FCAR Fc fragment of IgA receptor
FIGLA folliculogenesis specific basic helix-loop-helix
FUT5 fucosyltransferase 5 (alpha (1,3) fucosyltransferase)
FUT6 fucosyltransferase 6 (alpha (1,3) fucosyltransferase)
FYN FYN proto-oncogene, Src family tyrosine kinase
GANAB glucosidase, alpha; neutral AB
GCDH glutaryl-CoA dehydrogenase
GHRH growth hormone releasing hormone
GLB1L2 galactosidase, beta 1-like 2
GP1BA glycoprotein Ib (platelet), alpha polypeptide
GPAM glycerol-3-phosphate acyltransferase, mitochondrial
GPR84 G protein-coupled receptor 84
GPX3 glutathione peroxidase 3
GRIK4 glutamate receptor, ionotropic, kainate 4
GTF2H2B general transcription factor IIH, polypeptide 2B (pseudogene)
GTSF1L gametocyte specific factor 1-like
GUCY2EP guanylate cyclase 2E, pseudogene
GZF1 GDNF-inducible zinc finger protein 1
HAUS6 HAUS augmin-like complex, subunit 6
HEY2 hes-related family bHLH transcription factor with YRPW motif 2
HINFP histone H4 transcription factor
HRH4 histamine receptor H4
HRSP12 heat-responsive protein 12
HSFY1P1 heat shock transcription factor, Y-linked 1 pseudogene 1
IFNL3 interferon, lambda 3
IPO11 importin 11
IPO7 importin 7
ITGA9 integrin, alpha 9
JRKL JRK-like
KANK1 KN motif and ankyrin repeat domains 1
KBTBD3 kelch repeat and BTB (POZ) domain containing 3
KCNV2 potassium channel, voltage gated modifier subfamily V, member 2
KCTD21 potassium channel tetramerization domain containing 21
KIAA0196 KIAA0196
KIAA1429 KIAA1429
KIAA1671 KIAA1671
KIAA2026 KIAA2026
KLB klotho beta
KLF9 Kruppel-like factor 9
KLHL36 kelch-like family member 36
KLKP1 kallikrein pseudogene 1
KMT2A lysine (K)-specific methyltransferase 2A
LDHD lactate dehydrogenase D
LINC00115 long intergenic non-protein coding RNA 115
LINC00238 long intergenic non-protein coding RNA 238
LINC01548 long intergenic non-protein coding RNA 1548
LOC100130987 uncharacterized LOC100130987
LOC401010 nucleolar complex associated 2 homolog (S. cerevisiae) pseudogene
LOC402644 peptidylprolyl isomerase A (cyclophilin A) pseudogene
LOC647859 occludin pseudogene
LONRF3 LON peptidase N-terminal domain and ring finger 3
LPP LIM domain containing preferred translocation partner in lipoma
LRRC14 leucine rich repeat containing 14
LRRC8A leucine rich repeat containing 8 family, member A
LRRN4 leucine rich repeat neuronal 4
LYVE1 lymphatic vessel endothelial hyaluronan receptor 1
MAGEB4 melanoma antigen family B4
MAML2 mastermind-like 2 (Drosophila)
MAVS mitochondrial antiviral signaling protein
MDN1 MDN1, midasin homolog (yeast)
MED17 mediator complex subunit 17
MIA2 melanoma inhibitory activity 2
MMP16 matrix metallopeptidase 16 (membrane-inserted)
MOB3B MOB kinase activator 3B
MRC1 mannose receptor, C type 1
MT4 metallothionein 4
MTAP methylthioadenosine phosphorylase
MTHFD1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase
NAA11 N(alpha)-acetyltransferase 11, NatA catalytic subunit
NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative)
NBN nibrin
NCAM1 neural cell adhesion molecule 1
NCOA2 nuclear receptor coactivator 2
NDRG2 NDRG family member 2
NFE2L1 nuclear factor, erythroid 2-like 1
NFIC nuclear factor I/C (CCAAT-binding transcription factor)
NFRKB nuclear factor related to kappaB binding protein
NFX1 nuclear transcription factor, X-box binding 1
NIPSNAP3B nipsnap homolog 3B (C. elegans)
NLRP10 NLR family, pyrin domain containing 10
NPAT nuclear protein, ataxia-telangiectasia locus
NT5C2 5'-nucleotidase, cytosolic II
NTN1 netrin 1
NUMA1 nuclear mitotic apparatus protein 1
NXPE1 neurexophilin and PC-esterase domain family, member 1
OR10W1 olfactory receptor, family 10, subfamily W, member 1
OR1G1 olfactory receptor, family 1, subfamily G, member 1
OR1J4 olfactory receptor, family 1, subfamily J, member 4
OR5B3 olfactory receptor, family 5, subfamily B, member 3
OR6X1 olfactory receptor, family 6, subfamily X, member 1
OR8S1 olfactory receptor, family 8, subfamily S, member 1
OSBPL11 oxysterol binding protein-like 11
PABPC1 poly(A) binding protein, cytoplasmic 1
PABPC1P2 poly(A) binding protein, cytoplasmic 1 pseudogene 2
PABPC3 poly(A) binding protein, cytoplasmic 3
PAFAH1B2 platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)
PARD3 par-3 family cell polarity regulator
PCDHB17P protocadherin beta 17 pseudogene
PCDHGA11 protocadherin gamma subfamily A, 11
PCDHGB3 protocadherin gamma subfamily B, 3
PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
PDE4DIP phosphodiesterase 4D interacting protein
PDE8B phosphodiesterase 8B
PDILT protein disulfide isomerase-like, testis expressed
PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2
PHF20 PHD finger protein 20
PHGR1 proline/histidine/glycine-rich 1
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific)
PLEC plectin
POLR3H polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)
POM121L10P POM121 transmembrane nucleoporin-like 10, pseudogene
PPAP2B phosphatidic acid phosphatase type 2B
PPARA peroxisome proliferator-activated receptor alpha
PPM1K protein phosphatase, Mg2+/Mn2+ dependent, 1K
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L
PPP1R10 protein phosphatase 1, regulatory subunit 10
PPP5C protein phosphatase 5, catalytic subunit
PRKDC protein kinase, DNA-activated, catalytic polypeptide
PRKRIR protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
PRLHR prolactin releasing hormone receptor
PSG9 pregnancy specific beta-1-glycoprotein 9
PSMA8 proteasome (prosome, macropain) subunit, alpha type, 8
PSMB11 proteasome (prosome, macropain) subunit, beta type, 11
PTCH1 patched 1
PYGO1 pygopus family PHD finger 1
RAB2A RAB2A, member RAS oncogene family
RAD21 RAD21 homolog (S. pombe)
RANBP3L RAN binding protein 3-like
RANBP6 RAN binding protein 6
RBL2 retinoblastoma-like 2
REEP6 receptor accessory protein 6
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A
RIN2 Ras and Rab interactor 2
RNF214 ring finger protein 214
RNF26 ring finger protein 26
RNF32 ring finger protein 32
RNF5P1 ring finger protein 5, E3 ubiquitin protein ligase pseudogene 1
RPL23AP53 ribosomal protein L23a pseudogene 53
RPRD2 regulation of nuclear pre-mRNA domain containing 2
RPS6 ribosomal protein S6
RSL1D1 ribosomal L1 domain containing 1
S1PR3 sphingosine-1-phosphate receptor 3
SCP2D1 SCP2 sterol-binding domain containing 1
SCRN1 secernin 1
SEC23B Sec23 homolog B (S. cerevisiae)
SERHL serine hydrolase-like (pseudogene)
SIK3 SIK family kinase 3
SLC22A13 solute carrier family 22 (organic anion/urate transporter), member 13
SLC2A4 solute carrier family 2 (facilitated glucose transporter), member 4
SLCO5A1 solute carrier organic anion transporter family, member 5A1
SMU1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)
SNHG4 small nucleolar RNA host gene 4
SNN stannin
SNORD116-20 small nucleolar RNA, C/D box 116-20
SNX15 sorting nexin 15
SPEN spen family transcriptional repressor
SRSF8 serine/arginine-rich splicing factor 8
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6
STAT5B signal transducer and activator of transcription 5B
SULT1C4 sulfotransferase family, cytosolic, 1C, member 4
SYBU syntabulin (syntaxin-interacting)
SYCP3 synaptonemal complex protein 3
SYTL4 synaptotagmin-like 4
SYVN1 synovial apoptosis inhibitor 1, synoviolin
TAAR5 trace amine associated receptor 5
TAAR8 trace amine associated receptor 8
TADA2B transcriptional adaptor 2B
TAS1R2 taste receptor, type 1, member 2
TAS2R60 taste receptor, type 2, member 60
TBC1D14 TBC1 domain family, member 14
TBX2 T-box 2
TERF1 telomeric repeat binding factor (NIMA-interacting) 1
TG thyroglobulin
TGFBR3 transforming growth factor, beta receptor III
TIGD5 tigger transposable element derived 5
TINCR tissue differentiation-inducing non-protein coding RNA
TMEM236 transmembrane protein 236
TMPRSS5 transmembrane protease, serine 5
TRAK1 trafficking protein, kinesin binding 1
TRPS1 trichorhinophalangeal syndrome I
UBAP1 ubiquitin associated protein 1
UBAP2 ubiquitin associated protein 2
UBR5 ubiquitin protein ligase E3 component n-recognin 5
UBXN2B UBX domain protein 2B
UTP14A UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)
UTP23 UTP23, small subunit (SSU) processome component, homolog (yeast)
UTRN utrophin
VANGL2 VANGL planar cell polarity protein 2
VCAN versican
VPS13B vacuolar protein sorting 13 homolog B (yeast)
YTHDF3 YTH N(6)-methyladenosine RNA binding protein 3
ZBED3 zinc finger, BED-type containing 3
ZBTB10 zinc finger and BTB domain containing 10
ZBTB2 zinc finger and BTB domain containing 2
ZC3H12C zinc finger CCCH-type containing 12C
ZFHX4 zinc finger homeobox 4
ZHX2 zinc fingers and homeoboxes 2
ZNF16 zinc finger protein 16
ZNF250 zinc finger protein 250
ZNF274 zinc finger protein 274
ZNF275 zinc finger protein 275
ZNF34 zinc finger protein 34
ZNF395 zinc finger protein 395
ZNF438 zinc finger protein 438
ZNF696 zinc finger protein 696
ZNF808 zinc finger protein 808

low expression

Symbol Name
EFCAB11 EF-hand calcium binding domain 11
LETMD1 LETM1 domain containing 1
NDUFA12 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12
NKAPP1 NFKB activating protein pseudogene 1
SETD4 SET domain containing 4