Brain Lower Grade Glioma_LGG_TCGA-DH-A66F-01A-11R-A29R-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

226 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DH-A66F-01A-11R-A29R-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCA17P ATP-binding cassette, sub-family A (ABC1), member 17, pseudogene
ABCC8 ATP-binding cassette, sub-family C (CFTR/MRP), member 8
ACCS 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)
ACO2 aconitase 2, mitochondrial
ACSL6 acyl-CoA synthetase long-chain family member 6
ACTR6 ARP6 actin-related protein 6 homolog (yeast)
ADH1C alcohol dehydrogenase 1C (class I), gamma polypeptide
AK3 adenylate kinase 3
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial)
ALDH5A1 aldehyde dehydrogenase 5 family, member A1
ALDOC aldolase C, fructose-bisphosphate
APLNR apelin receptor
APPL2 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
ASF1A anti-silencing function 1A histone chaperone
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2
ATP6V0D2 ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2
BMP2 bone morphogenetic protein 2
C10ORF62 chromosome 10 open reading frame 62
C12ORF60 chromosome 12 open reading frame 60
C14ORF28 chromosome 14 open reading frame 28
C16ORF90 chromosome 16 open reading frame 90
C18ORF32 chromosome 18 open reading frame 32
C19ORF45 chromosome 19 open reading frame 45
C1ORF185 chromosome 1 open reading frame 185
C1ORF27 chromosome 1 open reading frame 27
C2ORF83 chromosome 2 open reading frame 83
C5ORF47 chromosome 5 open reading frame 47
CALCOCO2 calcium binding and coiled-coil domain 2
CALML3 calmodulin-like 3
CALML5 calmodulin-like 5
CALN1 calneuron 1
CBS cystathionine-beta-synthase
CCBL1 cysteine conjugate-beta lyase, cytoplasmic
CD81 CD81 molecule
CD9 CD9 molecule
CDK2AP1 cyclin-dependent kinase 2 associated protein 1
CLEC4F C-type lectin domain family 4, member F
COMMD8 COMM domain containing 8
CORIN corin, serine peptidase
COX18 COX18 cytochrome c oxidase assembly factor
CPNE5 copine V
CRCT1 cysteine-rich C-terminal 1
CRIPAK cysteine-rich PAK1 inhibitor
CSDC2 cold shock domain containing C2, RNA binding
CYP1A1 cytochrome P450, family 1, subfamily A, polypeptide 1
DAND5 DAN domain family member 5, BMP antagonist
DDHD1 DDHD domain containing 1
DDO D-aspartate oxidase
DDR1 discoidin domain receptor tyrosine kinase 1
DERA deoxyribose-phosphate aldolase (putative)
DGCR6 DiGeorge syndrome critical region gene 6
DGKD diacylglycerol kinase, delta 130kDa
DKFZP434J0226 uncharacterized LOC93429
DNMBP-AS1 DNMBP antisense RNA 1
DSG3 desmoglein 3
EGLN3 egl-9 family hypoxia-inducible factor 3
EHD1 EH-domain containing 1
EIF2B2 eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa
EPHX1 epoxide hydrolase 1, microsomal (xenobiotic)
ETFDH electron-transferring-flavoprotein dehydrogenase
ETNPPL ethanolamine-phosphate phospho-lyase
F5 coagulation factor V (proaccelerin, labile factor)
FADS2 fatty acid desaturase 2
FAHD1 fumarylacetoacetate hydrolase domain containing 1
FAM107A family with sequence similarity 107, member A
FAM150B family with sequence similarity 150, member B
FAM186A family with sequence similarity 186, member A
FAM201A family with sequence similarity 201, member A
FAM210B family with sequence similarity 210, member B
FAM226B family with sequence similarity 226, member B (non-protein coding)
FAM83A family with sequence similarity 83, member A
FAM9B family with sequence similarity 9, member B
FBXW10 F-box and WD repeat domain containing 10
FDXR ferredoxin reductase
FHDC1 FH2 domain containing 1
FLJ16779 uncharacterized LOC100192386
FLJ37201 tigger transposable element derived 2 pseudogene
GATSL3 GATS protein-like 3
GDF9 growth differentiation factor 9
GFM1 G elongation factor, mitochondrial 1
GHDC GH3 domain containing
GKAP1 G kinase anchoring protein 1
GLUL glutamate-ammonia ligase
GOLGA8B golgin A8 family, member B
GPKOW G patch domain and KOW motifs
GPR137C G protein-coupled receptor 137C
GPR19 G protein-coupled receptor 19
GPR87 G protein-coupled receptor 87
GPR89B G protein-coupled receptor 89B
GPT glutamic-pyruvate transaminase (alanine aminotransferase)
GUCY1A3 guanylate cyclase 1, soluble, alpha 3
HADHB hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
HAUS7 HAUS augmin-like complex, subunit 7
HEY1 hes-related family bHLH transcription factor with YRPW motif 1
HIF3A hypoxia inducible factor 3, alpha subunit
HOGA1 4-hydroxy-2-oxoglutarate aldolase 1
HSPB8 heat shock 22kDa protein 8
HTRA1 HtrA serine peptidase 1
IL12A interleukin 12A
IL9 interleukin 9
ISX intestine-specific homeobox
IVL involucrin
KCND1 potassium channel, voltage gated Shal related subfamily D, member 1
KCNJ11 potassium channel, inwardly rectifying subfamily J, member 11
KDSR 3-ketodihydrosphingosine reductase
KIF6 kinesin family member 6
KLHDC1 kelch domain containing 1
KLK12 kallikrein-related peptidase 12
KLK9 kallikrein-related peptidase 9
KRT13 keratin 13, type I
KRT16 keratin 16, type I
KRT5 keratin 5, type II
KRT6A keratin 6A, type II
KRT6C keratin 6C, type II
LCAT lecithin-cholesterol acyltransferase
LCN12 lipocalin 12
LCNL1 lipocalin-like 1
LIAS lipoic acid synthetase
LINC00173 long intergenic non-protein coding RNA 173
LIPT1 lipoyltransferase 1
LOC100126784 uncharacterized LOC100126784
LOC100128573 uncharacterized LOC100128573
LOC100272217 uncharacterized LOC100272217
LOC613037 nuclear pore complex interacting protein pseudogene
LRRC8A leucine rich repeat containing 8 family, member A
LY6D lymphocyte antigen 6 complex, locus D
LY6K lymphocyte antigen 6 complex, locus K
LYPD1 LY6/PLAUR domain containing 1
LYPD2 LY6/PLAUR domain containing 2
LYPD3 LY6/PLAUR domain containing 3
LYRM2 LYR motif containing 2
LYRM5 LYR motif containing 5
MADCAM1 mucosal vascular addressin cell adhesion molecule 1
MCEE methylmalonyl CoA epimerase
METTL15 methyltransferase like 15
MME membrane metallo-endopeptidase
MN1 meningioma (disrupted in balanced translocation) 1
MPC1 mitochondrial pyruvate carrier 1
MRM1 mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)
MRVI1 murine retrovirus integration site 1 homolog
MST1 macrophage stimulating 1
MTRF1L mitochondrial translational release factor 1-like
MUC21 mucin 21, cell surface associated
NBR2 neighbor of BRCA1 gene 2 (non-protein coding)
NOG noggin
NR1H3 nuclear receptor subfamily 1, group H, member 3
NUDT12 nudix (nucleoside diphosphate linked moiety X)-type motif 12
NUDT7 nudix (nucleoside diphosphate linked moiety X)-type motif 7
OR11H12 olfactory receptor, family 11, subfamily H, member 12
OR1J4 olfactory receptor, family 1, subfamily J, member 4
OR51B5 olfactory receptor, family 51, subfamily B, member 5
OR56B1 olfactory receptor, family 56, subfamily B, member 1
OSBPL5 oxysterol binding protein-like 5
OSGEPL1 O-sialoglycoprotein endopeptidase-like 1
PACRGL PARK2 co-regulated-like
PC pyruvate carboxylase
PCDHB5 protocadherin beta 5
PCDHGA9 protocadherin gamma subfamily A, 9
PEX12 peroxisomal biogenesis factor 12
PEX7 peroxisomal biogenesis factor 7
PGF placental growth factor
PGLYRP3 peptidoglycan recognition protein 3
PGRMC2 progesterone receptor membrane component 2
PPP1R3C protein phosphatase 1, regulatory subunit 3C
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit
PROCA1 protein interacting with cyclin A1
PRSS22 protease, serine, 22
PRSS48 protease, serine, 48
PTGDS prostaglandin D2 synthase 21kDa (brain)
PTGES3 prostaglandin E synthase 3 (cytosolic)
PTGR2 prostaglandin reductase 2
RAB10 RAB10, member RAS oncogene family
RAB31 RAB31, member RAS oncogene family
RASA4 RAS p21 protein activator 4
REC114 REC114 meiotic recombination protein
RHBDL3 rhomboid, veinlet-like 3 (Drosophila)
SELL selectin L
SERPINB13 serpin peptidase inhibitor, clade B (ovalbumin), member 13
SFN stratifin
SFRP2 secreted frizzled-related protein 2
SH2D6 SH2 domain containing 6
SH3YL1 SH3 and SYLF domain containing 1
SHISA3 shisa family member 3
SLC12A4 solute carrier family 12 (potassium/chloride transporter), member 4
SLC16A9 solute carrier family 16, member 9
SLC22A5 solute carrier family 22 (organic cation/carnitine transporter), member 5
SLC25A18 solute carrier family 25 (glutamate carrier), member 18
SLC29A2 solute carrier family 29 (equilibrative nucleoside transporter), member 2
SLC38A1 solute carrier family 38, member 1
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4
SLC6A8 solute carrier family 6 (neurotransmitter transporter), member 8
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5
SLC9B1 solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
SPARC secreted protein, acidic, cysteine-rich (osteonectin)
SPARCL1 SPARC-like 1 (hevin)
SPRR1A small proline-rich protein 1A
SPRR2A small proline-rich protein 2A
SPRR2C small proline-rich protein 2C (pseudogene)
SPRR3 small proline-rich protein 3
SRP9 signal recognition particle 9kDa
TACSTD2 tumor-associated calcium signal transducer 2
TBC1D29 TBC1 domain family, member 29
TBC1D7 TBC1 domain family, member 7
TDH L-threonine dehydrogenase (pseudogene)
THAP9 THAP domain containing 9
TK2 thymidine kinase 2, mitochondrial
TM4SF19 transmembrane 4 L six family member 19
TMEM41B transmembrane protein 41B
TMEM80 transmembrane protein 80
TMEM9B TMEM9 domain family, member B
TMPRSS11D transmembrane protease, serine 11D
TREX2 three prime repair exonuclease 2
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae)
TROVE2 TROVE domain family, member 2
TTTY6 testis-specific transcript, Y-linked 6 (non-protein coding)
UNC50 unc-50 homolog (C. elegans)
USH1C Usher syndrome 1C (autosomal recessive, severe)
VAMP4 vesicle-associated membrane protein 4
VGLL1 vestigial-like family member 1
WFDC12 WAP four-disulfide core domain 12
YAF2 YY1 associated factor 2
ZFYVE21 zinc finger, FYVE domain containing 21
ZNF385A zinc finger protein 385A
ZNF654 zinc finger protein 654
ZSCAN10 zinc finger and SCAN domain containing 10

low expression

Symbol Name
GCFC2 GC-rich sequence DNA-binding factor 2