Brain Lower Grade Glioma_LGG_TCGA-DB-A64X-01A-11R-A29R-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

341 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DB-A64X-01A-11R-A29R-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AATF apoptosis antagonizing transcription factor
ABCC6P2 ATP-binding cassette, sub-family C, member 6 pseudogene 2
ACO2 aconitase 2, mitochondrial
ACSF2 acyl-CoA synthetase family member 2
ACTR6 ARP6 actin-related protein 6 homolog (yeast)
ACYP2 acylphosphatase 2, muscle type
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial)
ALG1L ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like
AMICA1 adhesion molecule, interacts with CXADR antigen 1
ANAPC16 anaphase promoting complex subunit 16
ANKDD1A ankyrin repeat and death domain containing 1A
ANKRD35 ankyrin repeat domain 35
APOE apolipoprotein E
ARHGEF10L Rho guanine nucleotide exchange factor (GEF) 10-like
ARL5C ADP-ribosylation factor-like 5C
ASAP1-IT1 ASAP1 intronic transcript 1
ASCL4 achaete-scute family bHLH transcription factor 4
ATP5C1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
ATP8B5P ATPase, class I, type 8B, member 5, pseudogene
AWAT2 acyl-CoA wax alcohol acyltransferase 2
BMPR1B bone morphogenetic protein receptor, type IB
C14ORF93 chromosome 14 open reading frame 93
C1ORF105 chromosome 1 open reading frame 105
C20ORF203 chromosome 20 open reading frame 203
C3ORF62 chromosome 3 open reading frame 62
C6ORF10 chromosome 6 open reading frame 10
C8ORF76 chromosome 8 open reading frame 76
CABLES1 Cdk5 and Abl enzyme substrate 1
CALML4 calmodulin-like 4
CARD17 caspase recruitment domain family, member 17
CATSPER3 cation channel, sperm associated 3
CCDC62 coiled-coil domain containing 62
CCDC83 coiled-coil domain containing 83
CD163L1 CD163 molecule-like 1
CDAN1 codanin 1
CDH17 cadherin 17, LI cadherin (liver-intestine)
CHST1 carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
CIDEC cell death-inducing DFFA-like effector c
CLIC2 chloride intracellular channel 2
CLLU1 chronic lymphocytic leukemia up-regulated 1
CLPTM1 cleft lip and palate associated transmembrane protein 1
CLRN2 clarin 2
CMA1 chymase 1, mast cell
CNBD2 cyclic nucleotide binding domain containing 2
CNBP CCHC-type zinc finger, nucleic acid binding protein
CNKSR1 connector enhancer of kinase suppressor of Ras 1
CPLX4 complexin 4
CRIPT cysteine-rich PDZ-binding protein
CRYBB3 crystallin, beta B3
CSRP2 cysteine and glycine-rich protein 2
CST5 cystatin D
CWF19L1 CWF19-like 1, cell cycle control (S. pombe)
CYB5A cytochrome b5 type A (microsomal)
CYP17A1 cytochrome P450, family 17, subfamily A, polypeptide 1
CYP3A43 cytochrome P450, family 3, subfamily A, polypeptide 43
DBP D site of albumin promoter (albumin D-box) binding protein
DDX11L2 DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 like 2
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial
DKFZP779M0652 uncharacterized DKFZp779M0652
DNASE1L3 deoxyribonuclease I-like 3
DPH5 diphthamide biosynthesis 5
ECH1 enoyl CoA hydratase 1, peroxisomal
EID2B EP300 interacting inhibitor of differentiation 2B
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa
EIF3H eukaryotic translation initiation factor 3, subunit H
ELSPBP1 epididymal sperm binding protein 1
EMC2 ER membrane protein complex subunit 2
ENPP3 ectonucleotide pyrophosphatase/phosphodiesterase 3
EPGN epithelial mitogen
EPHX1 epoxide hydrolase 1, microsomal (xenobiotic)
ERO1LB ERO1-like beta (S. cerevisiae)
ESPNP espin pseudogene
ETFA electron-transfer-flavoprotein, alpha polypeptide
EXD3 exonuclease 3'-5' domain containing 3
EXOSC5 exosome component 5
FAM110A family with sequence similarity 110, member A
FAM138B family with sequence similarity 138, member B
FAM171A1 family with sequence similarity 171, member A1
FAM195A family with sequence similarity 195, member A
FAM217A family with sequence similarity 217, member A
FAM219B family with sequence similarity 219, member B
FAM83A family with sequence similarity 83, member A
FAM83E family with sequence similarity 83, member E
FAM92A1 family with sequence similarity 92, member A1
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
FBL fibrillarin
FBXO25 F-box protein 25
FBXO44 F-box protein 44
FLJ37453 uncharacterized LOC729614
FOXD1 forkhead box D1
GAS2L1 growth arrest-specific 2 like 1
GFI1B growth factor independent 1B transcription repressor
GGTA1P glycoprotein, alpha-galactosyltransferase 1 pseudogene
GJA10 gap junction protein, alpha 10, 62kDa
GLTSCR2 glioma tumor suppressor candidate region gene 2
GSDMC gasdermin C
GTF2A1L general transcription factor IIA, 1-like
GTF2H4 general transcription factor IIH, polypeptide 4, 52kDa
GUCA1B guanylate cyclase activator 1B (retina)
GYPB glycophorin B (MNS blood group)
HADHB hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
HCAR2 hydroxycarboxylic acid receptor 2
HDHD1 haloacid dehalogenase-like hydrolase domain containing 1
HEATR9 HEAT repeat containing 9
HES4 hes family bHLH transcription factor 4
HEY2 hes-related family bHLH transcription factor with YRPW motif 2
HIST1H4K histone cluster 1, H4k
HMGB3P1 high mobility group box 3 pseudogene 1
HOXA11 homeobox A11
HOXD8 homeobox D8
HYPM huntingtin interacting protein M
ID2B inhibitor of DNA binding 2B, dominant negative helix-loop-helix protein (pseudogene)
ID3 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
IDI2 isopentenyl-diphosphate delta isomerase 2
IFIT1B interferon-induced protein with tetratricopeptide repeats 1B
IL12A interleukin 12A
IL25 interleukin 25
IL27 interleukin 27
IL4 interleukin 4
ILVBL ilvB (bacterial acetolactate synthase)-like
IQCB1 IQ motif containing B1
ISOC2 isochorismatase domain containing 2
KANK2 KN motif and ankyrin repeat domains 2
KCNE2 potassium channel, voltage gated subfamily E regulatory beta subunit 2
KCTD6 potassium channel tetramerization domain containing 6
KIAA0196 KIAA0196
KIF1BP KIF1 binding protein
KRTAP11-1 keratin associated protein 11-1
KRTAP13-1 keratin associated protein 13-1
LAMB2P1 laminin, beta 2 pseudogene 1
LCE1B late cornified envelope 1B
LEKR1 leucine, glutamate and lysine rich 1
LIN7C lin-7 homolog C (C. elegans)
LINC00207 long intergenic non-protein coding RNA 207
LMOD3 leiomodin 3 (fetal)
LOC100130264 uncharacterized LOC100130264
LOC256880 uncharacterized LOC256880
LOC285627 uncharacterized LOC285627
LOC340074 uncharacterized LOC340074
LOC388242 coiled-coil domain containing 101 pseudogene
LOC391322 D-dopachrome tautomerase-like
LOC650293 seven transmembrane helix receptor
LOC91450 uncharacterized LOC91450
LRRC47 leucine rich repeat containing 47
LTBP4 latent transforming growth factor beta binding protein 4
LYRM1 LYR motif containing 1
LYSMD2 LysM, putative peptidoglycan-binding, domain containing 2
MAGEA5 melanoma antigen family A5
MCUR1 mitochondrial calcium uniporter regulator 1
MDFI MyoD family inhibitor
MEF2BNB-MEF2B MEF2BNB-MEF2B readthrough
MEIS3 Meis homeobox 3
METTL5 methyltransferase like 5
MFNG MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
MRPL13 mitochondrial ribosomal protein L13
MS4A10 membrane-spanning 4-domains, subfamily A, member 10
MS4A8 membrane-spanning 4-domains, subfamily A, member 8
MST1R macrophage stimulating 1 receptor
MTFMT mitochondrial methionyl-tRNA formyltransferase
MTFR1L mitochondrial fission regulator 1-like
MYH13 myosin, heavy chain 13, skeletal muscle
NDUFB9 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa
NELFB negative elongation factor complex member B
NEUROG3 neurogenin 3
NINJ1 ninjurin 1
NKAIN4 Na+/K+ transporting ATPase interacting 4
NMB neuromedin B
NME1-NME2 NME1-NME2 readthrough
NMT2 N-myristoyltransferase 2
NMU neuromedin U
NMUR2 neuromedin U receptor 2
NOC2L nucleolar complex associated 2 homolog (S. cerevisiae)
NPVF neuropeptide VF precursor
NR1H2 nuclear receptor subfamily 1, group H, member 2
NRARP NOTCH-regulated ankyrin repeat protein
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae)
NSMCE4A non-SMC element 4 homolog A (S. cerevisiae)
NUDT16L1 nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1
OR1D2 olfactory receptor, family 1, subfamily D, member 2
OR1N1 olfactory receptor, family 1, subfamily N, member 1
OR2AG1 olfactory receptor, family 2, subfamily AG, member 1 (gene/pseudogene)
OR2J3 olfactory receptor, family 2, subfamily J, member 3
OR4K1 olfactory receptor, family 4, subfamily K, member 1
OR4K14 olfactory receptor, family 4, subfamily K, member 14
OR6B1 olfactory receptor, family 6, subfamily B, member 1
PABPN1L poly(A) binding protein, nuclear 1-like (cytoplasmic)
PANK4 pantothenate kinase 4
PCCA propionyl CoA carboxylase, alpha polypeptide
PCDHGA8 protocadherin gamma subfamily A, 8
PDSS1 prenyl (decaprenyl) diphosphate synthase, subunit 1
PGAP3 post-GPI attachment to proteins 3
PHF20L1 PHD finger protein 20-like 1
PHGDH phosphoglycerate dehydrogenase
PHOX2A paired-like homeobox 2a
PHYH phytanoyl-CoA 2-hydroxylase
PIGY phosphatidylinositol glycan anchor biosynthesis, class Y
PKP3 plakophilin 3
PLA2G4C phospholipase A2, group IVC (cytosolic, calcium-independent)
PMM1 phosphomannomutase 1
PMPCA peptidase (mitochondrial processing) alpha
POLR2K polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa
POMGNT2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-)
PPA1 pyrophosphatase (inorganic) 1
PPA2 pyrophosphatase (inorganic) 2
PPAPDC3 phosphatidic acid phosphatase type 2 domain containing 3
PPIAL4D peptidylprolyl isomerase A (cyclophilin A)-like 4D
PPP2R5A protein phosphatase 2, regulatory subunit B', alpha
PRAMEF11 PRAME family member 11
PRAMEF6 PRAME family member 6
PRKRA protein kinase, interferon-inducible double stranded RNA dependent activator
PROP1 PROP paired-like homeobox 1
PRR25 proline rich 25
PRTFDC1 phosphoribosyl transferase domain containing 1
PSMB11 proteasome (prosome, macropain) subunit, beta type, 11
PTK6 protein tyrosine kinase 6
RABGGTB Rab geranylgeranyltransferase, beta subunit
RASL10A RAS-like, family 10, member A
RBMXL3 RNA binding motif protein, X-linked-like 3
RDH16 retinol dehydrogenase 16 (all-trans)
RHOXF1 Rhox homeobox family, member 1
RLN1 relaxin 1
RNF139 ring finger protein 139
RNF183 ring finger protein 183
RNF215 ring finger protein 215
RPL13A ribosomal protein L13a
RPL13AP20 ribosomal protein L13a pseudogene 20
RPL13AP3 ribosomal protein L13a pseudogene 3
RPL18 ribosomal protein L18
RPL22 ribosomal protein L22
RPL23P8 ribosomal protein L23 pseudogene 8
RPL30 ribosomal protein L30
RPL5 ribosomal protein L5
RPS16 ribosomal protein S16
RPS19 ribosomal protein S19
RPS27A ribosomal protein S27a
RPS5 ribosomal protein S5
RPS8 ribosomal protein S8
RRAGD Ras-related GTP binding D
RSAD1 radical S-adenosyl methionine domain containing 1
S1PR1 sphingosine-1-phosphate receptor 1
SAGE1 sarcoma antigen 1
SDCBP2 syndecan binding protein (syntenin) 2
SDHB succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
SEC1P secretory blood group 1, pseudogene
SELK selenoprotein K
SIGLEC12 sialic acid binding Ig-like lectin 12 (gene/pseudogene)
SLC22A12 solute carrier family 22 (organic anion/urate transporter), member 12
SLC25A31 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31
SLC25A33 solute carrier family 25 (pyrimidine nucleotide carrier), member 33
SLC2A4 solute carrier family 2 (facilitated glucose transporter), member 4
SLC36A3 solute carrier family 36, member 3
SLC39A11 solute carrier family 39, member 11
SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
SMIM11 small integral membrane protein 11
SNHG10 small nucleolar RNA host gene 10
SOX3 SRY (sex determining region Y)-box 3
SRD5A2 steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)
SRMS src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites
SS18L2 synovial sarcoma translocation gene on chromosome 18-like 2
STK3 serine/threonine kinase 3
STON2 stonin 2
STOX1 storkhead box 1
SULT6B1 sulfotransferase family, cytosolic, 6B, member 1
TAF6L TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
TAS2R9 taste receptor, type 2, member 9
TATDN1 TatD DNase domain containing 1
TBATA thymus, brain and testes associated
TBC1D17 TBC1 domain family, member 17
TCF7L1 transcription factor 7-like 1 (T-cell specific, HMG-box)
TCP10 t-complex 10
TCTE3 t-complex-associated-testis-expressed 3
TDRD10 tudor domain containing 10
TDRP testis development related protein
THAP11 THAP domain containing 11
THAP3 THAP domain containing, apoptosis associated protein 3
TIGD1 tigger transposable element derived 1
TIMM21 translocase of inner mitochondrial membrane 21 homolog (yeast)
TM2D3 TM2 domain containing 3
TMEM65 transmembrane protein 65
TMPRSS12 transmembrane (C-terminal) protease, serine 12
TOP1P2 topoisomerase (DNA) I pseudogene 2
TPST2 tyrosylprotein sulfotransferase 2
TRAF7 TNF receptor-associated factor 7, E3 ubiquitin protein ligase
TRAPPC12 trafficking protein particle complex 12
TRIM42 tripartite motif containing 42
TRIM74 tripartite motif containing 74
TRMT12 tRNA methyltransferase 12 homolog (S. cerevisiae)
TSIX TSIX transcript, XIST antisense RNA
TTYH1 tweety family member 1
UBAC1 UBA domain containing 1
UBE2E1 ubiquitin-conjugating enzyme E2E 1
UBTD1 ubiquitin domain containing 1
UGT2B11 UDP glucuronosyltransferase 2 family, polypeptide B11
UPF3A UPF3 regulator of nonsense transcripts homolog A (yeast)
UQCRB ubiquinol-cytochrome c reductase binding protein
UQCRFS1 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
VGLL1 vestigial-like family member 1
WDR60 WD repeat domain 60
WDYHV1 WDYHV motif containing 1
WEE2 WEE1 homolog 2 (S. pombe)
WNT9B wingless-type MMTV integration site family, member 9B
ZAN zonadhesin (gene/pseudogene)
ZFAND2B zinc finger, AN1-type domain 2B
ZNF174 zinc finger protein 174
ZNF225 zinc finger protein 225
ZNF226 zinc finger protein 226
ZNF234 zinc finger protein 234
ZNF274 zinc finger protein 274
ZNF438 zinc finger protein 438
ZNF524 zinc finger protein 524
ZNF572 zinc finger protein 572
ZNF581 zinc finger protein 581
ZNF596 zinc finger protein 596
ZNF705D zinc finger protein 705D
ZNF768 zinc finger protein 768
ZPBP zona pellucida binding protein

low expression

Symbol Name
APMAP adipocyte plasma membrane associated protein
CCAR2 cell cycle and apoptosis regulator 2
CEP41 centrosomal protein 41kDa
CHMP7 charged multivesicular body protein 7
CNOT7 CCR4-NOT transcription complex, subunit 7
CRNKL1 crooked neck pre-mRNA splicing factor 1
EFCAB11 EF-hand calcium binding domain 11
GZF1 GDNF-inducible zinc finger protein 1
INTS10 integrator complex subunit 10
MFSD9 major facilitator superfamily domain containing 9
MON1B MON1 secretory trafficking family member B
NFXL1 nuclear transcription factor, X-box binding-like 1
PCM1 pericentriolar material 1
PCYT1A phosphate cytidylyltransferase 1, choline, alpha
PPP4R2 protein phosphatase 4, regulatory subunit 2
SLC37A4 solute carrier family 37 (glucose-6-phosphate transporter), member 4
SLC38A7 solute carrier family 38, member 7
SORBS3 sorbin and SH3 domain containing 3
TRAPPC9 trafficking protein particle complex 9
VPS37A vacuolar protein sorting 37 homolog A (S. cerevisiae)
XPO7 exportin 7
ZC3H13 zinc finger CCCH-type containing 13
ZFP41 ZFP41 zinc finger protein
ZNF623 zinc finger protein 623