Brain Lower Grade Glioma_LGG_TCGA-DB-A4XC-01A-11R-A26U-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

200 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DB-A4XC-01A-11R-A26U-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCC13 ATP-binding cassette, sub-family C (CFTR/MRP), member 13, pseudogene
ACAD10 acyl-CoA dehydrogenase family, member 10
ACSM1 acyl-CoA synthetase medium-chain family member 1
ACSM2A acyl-CoA synthetase medium-chain family member 2A
ADGRB1 adhesion G protein-coupled receptor B1
ADGRF4 adhesion G protein-coupled receptor F4
AGAP11 ankyrin repeat and GTPase domain Arf GTPase activating protein 11
AKR7L aldo-keto reductase family 7-like (gene/pseudogene)
ALLC allantoicase
AMOT angiomotin
ANKHD1-EIF4EBP3 ANKHD1-EIF4EBP3 readthrough
ANKLE2 ankyrin repeat and LEM domain containing 2
AQP7P3 aquaporin 7 pseudogene 3
ARHGAP32 Rho GTPase activating protein 32
ARHGAP6 Rho GTPase activating protein 6
ATG14 autophagy related 14
ATP11AUN ATP11A upstream neighbor
ATP4A ATPase, H+/K+ exchanging, alpha polypeptide
BLID BH3-like motif containing, cell death inducer
BTF3P11 basic transcription factor 3 pseudogene 11
C17ORF99 chromosome 17 open reading frame 99
C2ORF61 chromosome 2 open reading frame 61
C5ORF47 chromosome 5 open reading frame 47
CAPZA3 capping protein (actin filament) muscle Z-line, alpha 3
CBWD3 COBW domain containing 3
CC2D2B coiled-coil and C2 domain containing 2B
CCDC160 coiled-coil domain containing 160
CCDC62 coiled-coil domain containing 62
CCDC63 coiled-coil domain containing 63
CD38 CD38 molecule
CHRNA2 cholinergic receptor, nicotinic, alpha 2 (neuronal)
CHRNA3 cholinergic receptor, nicotinic, alpha 3 (neuronal)
CIDEC cell death-inducing DFFA-like effector c
CNTN3 contactin 3 (plasmacytoma associated)
COLCA1 colorectal cancer associated 1
COLCA2 colorectal cancer associated 2
CRYGA crystallin, gamma A
CST9L cystatin 9-like
CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
CTNNBIP1 catenin, beta interacting protein 1
CUZD1 CUB and zona pellucida-like domains 1
CYP2C19 cytochrome P450, family 2, subfamily C, polypeptide 19
DAPK1 death-associated protein kinase 1
DCK deoxycytidine kinase
DEFB109P1 defensin, beta 109, pseudogene 1
DIO1 deiodinase, iodothyronine, type I
DPEP3 dipeptidase 3
DYNAP dynactin associated protein
EEF2K eukaryotic elongation factor 2 kinase
EPPK1 epiplakin 1
FAM182B family with sequence similarity 182, member B
FAM69A family with sequence similarity 69, member A
FAM71B family with sequence similarity 71, member B
FAM9B family with sequence similarity 9, member B
FBRSL1 fibrosin-like 1
FBXO31 F-box protein 31
FGD2 FYVE, RhoGEF and PH domain containing 2
FKBP5 FK506 binding protein 5
FKSG29 FKSG29
FMR1NB fragile X mental retardation 1 neighbor
FOXE3 forkhead box E3
FOXO1 forkhead box O1
FRMD1 FERM domain containing 1
GABRR2 gamma-aminobutyric acid (GABA) A receptor, rho 2
GAGE12J G antigen 12J
GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic
GGTA1P glycoprotein, alpha-galactosyltransferase 1 pseudogene
GHSR growth hormone secretagogue receptor
GIGYF1 GRB10 interacting GYF protein 1
GK2 glycerol kinase 2
GOLGA8F golgin A8 family, member F
GPR152 G protein-coupled receptor 152
GPR88 G protein-coupled receptor 88
GPRC5D G protein-coupled receptor, class C, group 5, member D
GSTM4 glutathione S-transferase mu 4
GYPB glycophorin B (MNS blood group)
HCG4 HLA complex group 4 (non-protein coding)
HCG9 HLA complex group 9 (non-protein coding)
HIST1H4F histone cluster 1, H4f
HRNR hornerin
HSF5 heat shock transcription factor family member 5
IL9 interleukin 9
ILDR1 immunoglobulin-like domain containing receptor 1
INGX inhibitor of growth family, X-linked, pseudogene
ISX intestine-specific homeobox
KGFLP1 fibroblast growth factor 7 pseudogene
KLHL36 kelch-like family member 36
KLK15 kallikrein-related peptidase 15
KRTAP4-1 keratin associated protein 4-1
KRTAP5-11 keratin associated protein 5-11
LCE1B late cornified envelope 1B
LCNL1 lipocalin-like 1
LINC00051 long intergenic non-protein coding RNA 51
LINC01555 long intergenic non-protein coding RNA 1555
LINC01565 long intergenic non-protein coding RNA 1565
LOC100129550 uncharacterized LOC100129550
LOC100132287 uncharacterized LOC100132287
LOC100133331 uncharacterized LOC100133331
LOC283332 uncharacterized LOC283332
LOC284023 uncharacterized LOC284023
LOC340074 uncharacterized LOC340074
LOC729609 uncharacterized LOC729609
LRRC37A2 leucine rich repeat containing 37, member A2
LURAP1L leucine rich adaptor protein 1-like
MAGED4B melanoma antigen family D4B
MARVELD3 MARVEL domain containing 3
MCCD1 mitochondrial coiled-coil domain 1
MEP1B meprin A, beta
MME membrane metallo-endopeptidase
MRGPRD MAS-related GPR, member D
MSANTD2 Myb/SANT-like DNA-binding domain containing 2
N4BP2L1 NEDD4 binding protein 2-like 1
NMU neuromedin U
NPHP4 nephronophthisis 4
NUDT11 nudix (nucleoside diphosphate linked moiety X)-type motif 11
OCLM oculomedin
OR11H4 olfactory receptor, family 11, subfamily H, member 4
OR1L1 olfactory receptor, family 1, subfamily L, member 1
OR2K2 olfactory receptor, family 2, subfamily K, member 2
OR2M3 olfactory receptor, family 2, subfamily M, member 3
OR4M2 olfactory receptor, family 4, subfamily M, member 2
OR51B5 olfactory receptor, family 51, subfamily B, member 5
OR52D1 olfactory receptor, family 52, subfamily D, member 1
OR52N2 olfactory receptor, family 52, subfamily N, member 2
OTOP1 otopetrin 1
PADI6 peptidyl arginine deiminase, type VI
PANX3 pannexin 3
PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2
PATE1 prostate and testis expressed 1
PATE4 prostate and testis expressed 4
PDCL2 phosducin-like 2
PGBD2 piggyBac transposable element derived 2
PITPNM2 phosphatidylinositol transfer protein, membrane-associated 2
PITX3 paired-like homeodomain 3
PKDREJ polycystin (PKD) family receptor for egg jelly
PKHD1L1 polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1
PLSCR2 phospholipid scramblase 2
PMCHL1 pro-melanin-concentrating hormone-like 1, pseudogene
POU5F1 POU class 5 homeobox 1
PPBPP2 pro-platelet basic protein pseudogene 2
PPIAL4E peptidylprolyl isomerase A (cyclophilin A)-like 4E
PRRG4 proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
PRSS21 protease, serine, 21 (testisin)
PTGDR2 prostaglandin D2 receptor 2
RAB20 RAB20, member RAS oncogene family
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2
RASL12 RAS-like, family 12
RBMXL3 RNA binding motif protein, X-linked-like 3
REPS1 RALBP1 associated Eps domain containing 1
RGAG1 retrotransposon gag domain containing 1
RGSL1 regulator of G-protein signaling like 1
RNASE13 ribonuclease, RNase A family, 13 (non-active)
RNF113B ring finger protein 113B
RNF126P1 ring finger protein 126 pseudogene 1
RNF222 ring finger protein 222
SERPINC1 serpin peptidase inhibitor, clade C (antithrombin), member 1
SGCZ sarcoglycan, zeta
SH2D4B SH2 domain containing 4B
SH3RF1 SH3 domain containing ring finger 1
SIMC1 SUMO-interacting motifs containing 1
SLC10A2 solute carrier family 10 (sodium/bile acid cotransporter), member 2
SLC22A14 solute carrier family 22, member 14
SLC23A1 solute carrier family 23 (ascorbic acid transporter), member 1
SPATA31E1 SPATA31 subfamily E, member 1
SPINK9 serine peptidase inhibitor, Kazal type 9
SSTR1 somatostatin receptor 1
STOX1 storkhead box 1
TAS2R1 taste receptor, type 2, member 1
TAS2R46 taste receptor, type 2, member 46
TAT tyrosine aminotransferase
TBC1D2B TBC1 domain family, member 2B
TBC1D3C TBC1 domain family, member 3C
TBPL1 TBP-like 1
TECTA tectorin alpha
TEX30 testis expressed 30
TMC1 transmembrane channel-like 1
TMEM56 transmembrane protein 56
TMPRSS13 transmembrane protease, serine 13
TNFRSF8 tumor necrosis factor receptor superfamily, member 8
TPRXL tetra-peptide repeat homeobox-like
UBE4A ubiquitination factor E4A
UBR4 ubiquitin protein ligase E3 component n-recognin 4
ULK4P2 ULK4 pseudogene 2
ULK4P3 ULK4 pseudogene 3
USH1C Usher syndrome 1C (autosomal recessive, severe)
VN1R2 vomeronasal 1 receptor 2
VN1R5 vomeronasal 1 receptor 5 (gene/pseudogene)
VPS13D vacuolar protein sorting 13 homolog D (S. cerevisiae)
WFDC12 WAP four-disulfide core domain 12
WISP2 WNT1 inducible signaling pathway protein 2
ZAN zonadhesin (gene/pseudogene)
ZBTB8A zinc finger and BTB domain containing 8A
ZNF189 zinc finger protein 189
ZNF273 zinc finger protein 273
ZNF645 zinc finger protein 645
ZNF658 zinc finger protein 658

low expression

Symbol Name
CCDC127 coiled-coil domain containing 127
GCSH glycine cleavage system protein H (aminomethyl carrier)
LARS leucyl-tRNA synthetase
PDCD6 programmed cell death 6