Title Samples Organism Submission date Link to PubMed GEO accession
Launch Viewer Launch Notebook Uncovering mechanisms of early human lineage specification by CRISPR/Cas9-mediated genome editing [RNA-seq] 85 human Jun 16 2017 28953884 GSE100118
Launch Viewer Launch Notebook Heterogeneous responses of hematopoietic stem cells to inflammatory stimuli are altered with age - single cell 1526 mouse Jun 23 2017 GSE100426
Launch Viewer Launch Notebook Heterogeneous responses of hematopoietic stem cells to inflammatory stimuli are altered with age 1647 mouse Jun 23 2017 GSE100428
Launch Viewer Launch Notebook Defining the early steps of cardiovascularlineage segregation by single cell RNA-seq 598 mouse Jun 26 2017 29371425 GSE100471
Launch Viewer Launch Notebook Single-cell landscape of transcriptional heterogeneity and cell fate decisions during mouse early gastrulation 720 mouse Jun 28 2017 28768204 GSE100597
Launch Viewer Launch Notebook Pigment producing melanocytes as the cells of origin of BRAFV600E-induced mouse cutaneous melanoma 128 mouse Jun 28 2017 29033351 GSE100607
Launch Viewer Launch Notebook Single Cell RNA sequencing analysis of human haemopoietic lympho-myeloid progenitor populations (LMPP, MLP and GMP) 331 human Jun 28 2017 29167569 GSE100618
Launch Viewer Launch Notebook Single cell RNA-seq of smooth muscle actin cell in the lung. 159 mouse Jul 12 2017 28886383 GSE101334
Launch Viewer Launch Notebook A Distinct Population of Thirst-Associated Preoptic Neurons Encodes an Aversive Motivational Drive 468 mouse Jul 16 2017 28912243 GSE101487
Launch Viewer Launch Notebook Single cell RNA-sequencing of Mbd3-null and control lymphoid progenitor cells 653 mouse Jul 20 2017 28899870 GSE101712
Launch Viewer Launch Notebook Single cell RNA Seq data of BMDM from mouse infected with Salmonella [full time course] 236 mouse Aug 02 2017 29073931 GSE102160
Launch Viewer Launch Notebook Single cell RNA Seq data of BMDM from mouse infected with Salmonella [hundred_ten_singles] 84 mouse Aug 02 2017 29073931 GSE102161
Launch Viewer Launch Notebook Neuromedin U receptor-1 amplifies inflammatory lung innate lymphoid cells 737 mouse Aug 07 2017 28902842 GSE102299
Launch Viewer Launch Notebook Aldosterone-Sensing Neurons in the NTS Exhibit State-Dependent Pacemaker Activity and Drive Sodium Appetite via Synergy with Angiotensin II Signaling. 63 mouse Aug 07 2017 GSE102332
Launch Viewer Launch Notebook Single-cell RNA sequencing of EPLM subpopulations (152 Ly6D+ and 213 TN) 365 mouse Aug 09 2017 29030486 GSE102455
Launch Viewer Launch Notebook bigSCale: An Analytical Framework for Big-Scale Single Cell Data 1541 human Aug 22 2017 GSE102934
Launch Viewer Launch Notebook Single-cell RNAseq Reveals Seven Classes of Visceral Sensory Neuron 390 mouse Aug 22 2017 29483303 GSE102962
Launch Viewer Launch Notebook Temporal tracking of microglia activation in neurodegeneration at single-cell resolution 821 mouse Aug 31 2017 29020624 GSE103334
Launch Viewer Launch Notebook Single cell analysis reveals cancer cell heterogeneities in hepatcellular carcinoma 94 human Sep 07 2017 29315726 GSE103591
Launch Viewer Launch Notebook Single-cell RNA sequencing of sensory neurons in the mouse dorsal horn 815 mouse Sep 13 2017 GSE103840
Launch Viewer Launch Notebook Single cell analysis reveals cancer cell heterogeneities in hepatocellular carcinoma [SMART-seq] 93 human Sep 14 2017 29315726 GSE103866
Launch Viewer Launch Notebook Single cell transcriptomic profiling of pluripotent stem cell-derived SCGB3A2+ airway epithelium reveals fate plasticity* - Fluidigm C1: bronchospheres day 27* 72 human Sep 15 2017 29657097 GSE103919
Launch Viewer Launch Notebook Spatial reconstruction of immune niches by combining photoactivatable reporter and single-cell RNA-seq 149 mouse Sep 20 2017 29217582 GSE104054
Launch Viewer Launch Notebook Clonally expanded CD4+ T cells with a unique gene signature contribute to persistence of the HIV-1 latent reservoir 206 human Oct 02 2017 29686423 GSE104490
Launch Viewer Launch Notebook Precursors of human CD4+ cytotoxic T lymphocytes identified by single-cell transcriptome analysis [scRNA-seq] 2234 human Nov 05 2017 29352091 GSE106540
Launch Viewer Launch Notebook Precursors of human CD4+ cytotoxic T lymphocytes identified by single-cell transcriptome analysis 2276 human Nov 05 2017 29352091 GSE106544
Launch Viewer Launch Notebook Single cell RNA sequencing of murine basophil/mast cell progenitors and granulocyte/monocyte progenitors 137 mouse Nov 16 2017 GSE106973
Launch Viewer Launch Notebook Subcellular genomics shows pervasive within-mitochondrion single nucleotide variant heteroplasmy as revealed by single mitochondrion sequencing 158 mouse Nov 17 2017 29212019 GSE107115
Launch Viewer Launch Notebook Variation in activity state, axonal projection, and position define the transcriptional identity of individual neocortical projection neurons. 999 mouse Dec 04 2017 GSE107632
Launch Viewer Launch Notebook Single Cell RNA Sequencing Analysis of Mouse E14.5 Fetal Liver Runx1 P2-hCD4 plus and minus MEPs and CMPs 170 mouse Dec 04 2017 GSE107653
Launch Viewer Launch Notebook Mapping Mouse Cell Atlas by Microwell-seq 88 human Dec 14 2017 29474909 GSE108097
Launch Viewer Launch Notebook Single-cell RNA-sequencing reveals distinct populations of glucagon-like peptide-1 producing cells in the mouse upper small intestine 132 mouse Dec 14 2017 29031728 GSE108108
Launch Viewer Launch Notebook Analysis of gene expression profile in the control and CHD7-knockdown hiPSC-derived lt-NES cells (scRNA-Seq) 92 human Dec 19 2017 29440260 GSE108275
Launch Viewer Launch Notebook Endoplasmic reticulum stress engenders immune-resistant, latent pancreatic cancer metastases 202 mouse Jan 05 2018 GSE108811
Launch Viewer Launch Notebook Joint profiling of chromatin accessibility, DNA methylation and transcription in single cells 116 human Jan 16 2018 29472610 GSE109262
Launch Viewer Launch Notebook Transcriptional profiling of pre- and post-natal glutamatergic progenitors and nascent neurons by single cell RNA sequencing 230 mouse Jan 24 2018 29514086 GSE109556
Launch Viewer Launch Notebook Early emergence of cortical interneuron diversity in the mouse embryo 2639 mouse Jan 29 2018 29472441 GSE109796
Launch Viewer Launch Notebook Spatial and single-cell transcriptional profiling identifies functionally distinct human dermal fibroblast subpopulations 160 human Jan 29 2018 GSE109822
Launch Viewer Launch Notebook Early lineage segregation of multipotent embryonic mammary gland progenitors [RNA-Seq II] 335 mouse Feb 08 2018 29784918 GSE110351
Launch Viewer Launch Notebook Single cell RNA-seq reveals heterogeneity and hierarchy of mouse mammary epithelia 237 mouse Feb 08 2018 29666189 GSE110371
Launch Viewer Launch Notebook Single cell transcriptional dynamics of flavivirus infection 1868 human Feb 12 2018 29451494 GSE110496
Launch Viewer Launch Notebook Single cell RNA sequencing of multiple myeloma II 127 human Feb 12 2018 29898899 GSE110499
Launch Viewer Launch Notebook Single cell transcriptomic analysis (InDrops) of mouse FoxP3+ regulatory CD4+ T cells isolated from spleen and colon 43 mouse Feb 13 2018 29434354 GSE110558
Launch Viewer Launch Notebook Single-Cell RNA-Seq Reveals Transcriptional Heterogeneity in Latent and Reactivated HIV-infected Cells 300 human Mar 12 2018 29694901 GSE111727
Launch Viewer Launch Notebook Parabiosis and single-cell RNA-Sequencing reveal a limited contribution of monocytes to myofibroblasts in kidney fibrosis 275 mouse Mar 19 2018 29720573 GSE112033
Launch Viewer Launch Notebook Diverse reprogramming codes for neuronal identity 97 mouse Mar 27 2018 29743677 GSE112381
Launch Viewer Launch Notebook Genome-wide transcriptional analysis of human patterned induced neurons (hpiNs) 64 human Apr 05 2018 GSE112732
Launch Viewer Launch Notebook Single Cell RNA sequencing of Adult Human Breast Epithelial Cells [C1_Individual_1] 193 human Apr 13 2018 GSE113099
Launch Viewer Launch Notebook Single Cell RNA sequencing of Adult Human Breast Epithelial Cells [C1_Individual_2] 216 human Apr 13 2018 GSE113127
Launch Viewer Launch Notebook Single Cell RNA sequencing of Adult Human Breast Epithelial Cells [C1_Individual_3] 324 human Apr 16 2018 GSE113198
Launch Viewer Launch Notebook Studying the genetic heterogeneity in mouse dopamine neurons 358 mouse May 30 2018 GSE115070
Launch Viewer Launch Notebook Single cell transcriptomic analysis (InDrops) of mouse FoxP3+ regulatory CD4+ T cells isolated from spleen and muscle after injury 293 mouse May 30 2018 GSE115125
Launch Viewer Launch Notebook Tracing pluripotency of human early embryos and embryonic stem cells by single cell RNA-seq 124 human Mar 16 2012 23934149 GSE36552
Launch Viewer Launch Notebook Quartz-Seq: a simple and highly quantitative method for single-cell RNA-Seq 77 mouse Nov 14 2012 23594475 GSE42268
Launch Viewer Launch Notebook Single-cell RNA-Seq reveals dynamic, random monoallelic gene expression in mammalian cells 317 mouse Apr 02 2013 24408435 GSE45719
Launch Viewer Launch Notebook Microfluidic single-cell whole-transcriptome sequencing 100 mouse Jun 11 2013 24782542 GSE47835
Launch Viewer Launch Notebook Whole transcriptome sequencing in 274 glioma patients reveals gene fusion profiling and novel candidate fusion genes 274 human Jul 15 2013 25135958 GSE48865
Launch Viewer Launch Notebook Single-cell RNA-seq reveals dynamic paracrine control of cellular variation 2131 mouse Jul 17 2013 24919153 GSE48968
Launch Viewer Launch Notebook Quantitative assessment of single-cell RNA sequencing methods 109 human Sep 27 2013 24141493 GSE51254
Launch Viewer Launch Notebook Pseudo-temporal ordering of individual cells reveals regulators of differentiation 384 human Nov 19 2013 24658644 GSE52529
Launch Viewer Launch Notebook High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) 129 mouse Nov 20 2013 24739965 GSE52583
Launch Viewer Launch Notebook Single-cell RNA-Seq transcriptome analysis of circular RNAs in mouse embryos 88 human Dec 17 2013 GSE53386
Launch Viewer Launch Notebook Characterization of differentiating adipose cells by high-throughput single-cell RNA-Seq 52 human Dec 24 2013 GSE53638
Launch Viewer Launch Notebook Noncoding RNA transcriptome analysis during cellular reprogramming 94 mouse Feb 24 2014 25575081 GSE55291
Launch Viewer Launch Notebook Cell fate inclination within 2-cell and 4-cell mouse embryos revealed by single-cell RNA sequencing 56 mouse May 02 2014 25096407 GSE57249
Launch Viewer Launch Notebook Direct Induction of Hematoendothelial Program in Human Pluripotent Stem Cells by Transcriptional Regulators 53 human May 07 2014 25019369 GSE57395
Launch Viewer Launch Notebook Single cell RNA-seq of primary human glioblastomas 875 human May 21 2014 24925914 GSE57872
Launch Viewer Launch Notebook Core Ileal Transcriptome in Pediatric Crohn Disease 322 human May 23 2014 25003194 GSE57945
Launch Viewer Launch Notebook RNA-SEQ analysis of single cells extracted from E12.5 embryonic kidneys. 86 mouse Jul 07 2014 25053437 GSE59127
Launch Viewer Launch Notebook RNA-SEQ analysis of single cells extracted from the renal vesicles of P4 Crym-EGFP transgenic mice 57 mouse Jul 07 2014 25053437 GSE59130
Launch Viewer Launch Notebook RNA-Seq of single cells from the mouse lumbar dorsal root ganglion 864 mouse Jul 24 2014 25420068 GSE59739
Launch Viewer Launch Notebook Tbx3 controls Dppa3 levels to regulate exit from pluripotency towards mesodermal lineage 48 mouse Aug 04 2014 26095607 GSE60066
Launch Viewer Launch Notebook Single-cell RNA-seq of mouse cerebral cortex 2923 mouse Aug 12 2014 25700174 GSE60361
Launch Viewer Launch Notebook RNA-seq of laser-capture microdissected 50x50x50 um tissue cubes from the medial ganglionic eminence of wild-type and GFRa1 mutant mice 312 mouse Aug 13 2014 25344199 GSE60402
Launch Viewer Launch Notebook Identification of subset-specific dendritic cell progenitors reveals early commitment in the bone marrow [RNA-Seq] 251 mouse Aug 26 2014 26054720 GSE60781
Launch Viewer Launch Notebook Molecular signatures of heterogeneous stem cell populations are resolved by linking single cell functional assays to single cell gene expression 95 mouse Sep 18 2014 26004780 GSE61533
Launch Viewer Launch Notebook Ileal immune maturation in Pediatric Crohn's Disease 310 human Oct 09 2014 GSE62207
Launch Viewer Launch Notebook 7q11.23 dosage-dependent dysregulation in the human pluripotent state primes aberrant transcriptional programs in disease-relevant lineages (RNAseq) 57 human Nov 06 2014 25501393 27190234 GSE63055
Launch Viewer Launch Notebook 7q11.23 dosage-dependent dysregulation in the human pluripotent state primes aberrant transcriptional programs in disease-relevant lineages 57 human Nov 06 2014 25501393 GSE63058
Launch Viewer Launch Notebook RNAseq of Individual 4T1 Clonal Populations 54 mouse Nov 11 2014 25855289 GSE63180
Launch Viewer Launch Notebook Somatosensory Neuron Types Identified by High-Coverage Single-Cell RNA-Sequencing and Functional Heterogeneity 209 mouse Nov 24 2014 26691752 GSE63576
Launch Viewer Launch Notebook The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ Cells 364 human Dec 03 2014 26046443 GSE63818
Launch Viewer Launch Notebook Human pluripotent stem cell-derived neural constructs for predictive neurotoxicity screening 303 human Dec 06 2014 26392547 GSE63935
Launch Viewer Launch Notebook Single cell RNA-seq data of human hESCs to evaluate Oscope - a statistical pipeline for identifying oscillatory genes in unsynchronized single cell RNA-Seq 459 human Dec 09 2014 26301841 GSE64016
Launch Viewer Launch Notebook Sexual cell fate reprogramming in the ovary by DMRT1 75 mouse Jan 14 2015 25683803 GSE64960
Launch Viewer Launch Notebook Authentic single cell RNA-Seq by measuring the transcriptome of an individual cell twice 68 mouse Jan 21 2015 GSE65160
Launch Viewer Launch Notebook Transcriptome profiling in knock-in mouse models of Huntington's disease [Striatum_mRNA] 208 mouse Feb 09 2015 26900923 GSE65774
Launch Viewer Launch Notebook Stereo-sequencing: 3D Transcriptome of the mouse embryo at gastrulation 192 mouse Feb 13 2015 27003939 GSE65924
Launch Viewer Launch Notebook Single mammalian cells compensate for differences in cellular volume and DNA copy number through independent global transcriptional mechanisms 98 human Feb 18 2015 25866248 GSE66053
Launch Viewer Launch Notebook Intrinsic age-dependent changes and cell-cell contacts regulate nephron progenitor lifespan 91 mouse Feb 23 2015 26460946 GSE66202
Launch Viewer Launch Notebook Scalable Microfluidics for Single Cell RNA Printing and Sequencing 203 human Feb 27 2015 26047807 GSE66357
Launch Viewer Launch Notebook The landscape of accessible chromatin in mammalian pre-implantation embryos 51 mouse Feb 27 2015 27309802 GSE66390
Launch Viewer Launch Notebook Leucegene: AML sequencing (part 5) 263 human Mar 18 2015 26237430 26834243 26968532 GSE67039
Launch Viewer Launch Notebook Tracing the Formation of Haematopoietic Stem Cells in Mouse Embryos by Single-cell Functional and RNA-Seq Analyses [single-cell] 181 mouse Mar 20 2015 27225119 GSE67120
Launch Viewer Launch Notebook Dissecting the direct reprogramming path of fibroblasts into neurons by single cell RNA-sequencing 405 mouse Mar 26 2015 27281220 GSE67310
Launch Viewer Launch Notebook Single-cell RNA-seq of murine epidermis 1056 mouse Apr 06 2015 27641957 GSE67602
Launch Viewer Launch Notebook Single-Cell Transcriptomics Reveals a Population of Dormant Neural Stem Cells that Become Activated upon Brain Injury 272 mouse Apr 13 2015 26235341 GSE67833
Launch Viewer Launch Notebook A survey of human brain transcriptome diversity at the single cell level 328 human Apr 14 2015 26060301 GSE67835
Launch Viewer Launch Notebook RNA-seq of tumor-educated platelets enables blood-based pan-cancer, multiclass and molecular pathway cancer diagnostics 285 human Apr 21 2015 26525104 GSE68086
Launch Viewer Launch Notebook Single Cell Transcriptomics Reveals Multi-Dimensional Heterogeneity in Early Hematopoietic Precursors 568 mouse May 18 2015 28003475 GSE68981
Launch Viewer Launch Notebook Single-cell RNA sequencing of lung adenocarcinoma patient-derived cells 208 human May 31 2015 26084335 GSE69405
Launch Viewer Launch Notebook Elucidating the etiology and molecular pathogenicity of infectious diarrhea by high throughput RNA sequencing 255 human Jun 03 2015 GSE69529
Launch Viewer Launch Notebook Fluidigm C1 + Illumina HiSeq quantitative whole transcriptome analysis of unsorted population of E16.5 lung cells 147 mouse Jun 10 2015 26130332 GSE69761
Launch Viewer Launch Notebook Transcriptome of mouse preimplantation development [Rlim KO] 175 mouse Jun 17 2015 27642011 GSE69970
Launch Viewer Launch Notebook Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq from CMP) 96 mouse Jun 24 2015 27580035 GSE70236
Launch Viewer Launch Notebook Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of Gfi1-/- GMP) 80 mouse Jun 24 2015 27580035 GSE70239
Launch Viewer Launch Notebook Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of GMP) 133 mouse Jun 24 2015 27580035 GSE70240
Launch Viewer Launch Notebook Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of Irf8 KO GMP) 62 mouse Jun 24 2015 27580035 GSE70242
Launch Viewer Launch Notebook Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of bone marrow lineage-negative CD117+ CD34+ cells) 65 mouse Jun 24 2015 27580035 GSE70243
Launch Viewer Launch Notebook Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of bone marrow lineage-negative Sca1+ CD117+ cells) 95 mouse Jun 24 2015 27580035 GSE70244
Launch Viewer Launch Notebook Single cell RNA-sequencing of human tonsil Innate lymphoid cells (ILCs) 648 human Jul 07 2015 26878113 GSE70580
Launch Viewer Launch Notebook Single Cell Sequencing Identifies Key Epigenetic Regulators in Nuclear Transfer Mediated Reprogramming [RNA-seq] 145 mouse Jul 07 2015 27462457 GSE70605
Launch Viewer Launch Notebook Single Cell Sequencing Identifies Key Epigenetic Regulators in Nuclear Transfer Mediated Reprogramming. 145 mouse Jul 07 2015 27462457 27626379 GSE70608
Launch Viewer Launch Notebook Single cell global gene profiling reveals molecular and functional platelet bias of aged hematopoietic stem cells 133 mouse Jul 09 2015 27009448 GSE70657
Launch Viewer Launch Notebook Single-cell analysis reveals lineage segregation and pluripotency state transition in early post-implantation mouse embryos 236 mouse Jul 09 2015 28298438 GSE70713
Launch Viewer Launch Notebook Single cell RNA-seq analysis of sensory neurons reveal diverse injury responses after sciatic nerve transection 123 mouse Jul 28 2015 27558660 GSE71453
Launch Viewer Launch Notebook Single-cell RNA-seq with Waterfall Reveals Molecular Cascades underlying Adult Hippocampal Neurogenesis 173 mouse Jul 29 2015 26299571 GSE71485
Launch Viewer Launch Notebook Adult mouse cortical cell taxonomy by single cell transcriptomics 1808 mouse Jul 31 2015 26727548 GSE71585
Launch Viewer Launch Notebook Notch Activation Confers Enhanced Lymphoid Potential in Murine ESC/iPSC-derived HSC and Reconstitutes Adaptive Immunity In Vivo [RNA-Seq] 285 mouse Aug 06 2015 28009288 GSE71794
Launch Viewer Launch Notebook Single-cell RNA-Seq resolves cellular complexity in sensory organs from the neonatal inner ear 320 mouse Aug 12 2015 26469390 GSE71982
Launch Viewer Launch Notebook Transcriptional heterogeneity and lineage commitment in myeloid progenitors [single cell RNA-seq] 54 mouse Sep 09 2015 26627738 GSE72857
Launch Viewer Launch Notebook Single-cell transcriptome profiling for metastatic renal cell carcinoma patient-derived cells [RNA-seq] 119 human Sep 17 2015 27139883 GSE73121
Launch Viewer Launch Notebook Single-cell transcriptome profiling for metastatic renal cell carcinoma patient-derived cells 119 human Sep 17 2015 27139883 GSE73122
Launch Viewer Launch Notebook Single-cell transcriptomics reveals unique features of human pancreatic islet cell subtypes 72 human Oct 05 2015 26691212 27916275 GSE73727
Launch Viewer Launch Notebook A Primate lncRNA Mediates Notch Signaling During Neuronal Development by Sequestering miRNA [single cell sequencing analysis] 56 human Oct 20 2015 27263970 GSE74207
Launch Viewer Launch Notebook A Primate lncRNA Mediates Notch Signaling During Neuronal Development by Sequestering miRNA 66 human Oct 20 2015 27263970 GSE74210
Launch Viewer Launch Notebook Unstranded RNA sequencing data 63 human Oct 21 2015 27526324 GSE74246
Launch Viewer Launch Notebook Tumor-derived circulating endothelial cell clusters in colorectal cancer 53 human Oct 26 2015 27358499 GSE74369
Launch Viewer Launch Notebook Parallel single-cell bisulfite- and RNA-sequencing link transcriptional and epigenetic heterogeneity [RNA-seq] 86 mouse Oct 30 2015 26752769 GSE74534
Launch Viewer Launch Notebook Innate-like functions of natural killer T cell subsets result from highly divergent gene programs [single_cell_RNA-seq] 203 mouse Nov 03 2015 27089380 GSE74596
Launch Viewer Launch Notebook Human cerebral organoids recapitulate gene expression programs of fetal neocortex development. 734 human Nov 18 2015 26644564 GSE75140
Launch Viewer Launch Notebook 4sU metabolic labeled transcripts in 65 YRI LCLs 372 human Nov 19 2015 27126046 GSE75220
Launch Viewer Launch Notebook HER2 expression identifies dynamic functional states within circulating breast cancer cells 71 human Nov 24 2015 27556950 GSE75367
Launch Viewer Launch Notebook Single cell RNAseq of electrophysiologically characterized neurons of the hippocampus 108 mouse Nov 24 2015 27531958 GSE75386
Launch Viewer Launch Notebook Single-cell indexed RNA-Seq of human hematopoietic stem and progenitors 1701 human Nov 30 2015 28319093 GSE75478
Launch Viewer Launch Notebook Biogenesis and function of tRNA fragments during sperm maturation and fertilization in mammals 570 mouse Dec 02 2015 26721685 GSE75622
Launch Viewer Launch Notebook Single cell RNA sequencing of primary breast cancer. 559 human Dec 03 2015 28474673 GSE75688
Launch Viewer Launch Notebook Snapshot and temporal scRNA-seq of progenitor cells to dissect human embryonic stem cells entry into endoderm progenitors 1808 human Dec 07 2015 27534536 GSE75748
Launch Viewer Launch Notebook Comparative analysis of single-cell RNA sequencing methods 583 mouse Dec 08 2015 28212749 GSE75790
Launch Viewer Launch Notebook Serum-based culture conditions provoke gene expression variability in mouse embryonic stem cells as revealed by single cell analysis 96 mouse Dec 08 2015 26804902 GSE75804
Launch Viewer Launch Notebook Integrative Single-Cell Transcriptomics Reveals Molecular Networks Defining Neuronal Maturation during Neurogenesis 64 mouse Dec 10 2015 26989163 GSE75901
Launch Viewer Launch Notebook Characterizing transcriptional heterogeneity through pathway and gene set overdispersion analysis (PAGODA) 64 mouse Dec 14 2015 26780092 GSE76005
Launch Viewer Launch Notebook Systematic reconstruction of molecular cascades regulating growth plate development using single-cell RNA-seq 217 mouse Dec 18 2015 27160914 GSE76157
Launch Viewer Launch Notebook Single cell transcriptome dynamics and subpopulation heterogeneity in radiation treated recurrent glioma 52 mouse Dec 19 2015 GSE76184
Launch Viewer Launch Notebook Towards therapeutic application of pronuclear transfer to prevent transmission of mitochondrial DNA disease 94 human Dec 22 2015 27281217 GSE76284
Launch Viewer Launch Notebook Single-cell transcriptomics uncovers distinct molecular signatures of stem cells in chronic myeloid leukemia 2263 human Dec 23 2015 28504724 GSE76312
Launch Viewer Launch Notebook Simultaneous profiling of transcriptome and DNA methylome from a single cell 155 mouse Jan 04 2016 27150361 GSE76483
Launch Viewer Launch Notebook Distinct myeloid progenitor differentiation pathways uncovered through single cell RNA sequencing 64 mouse Jan 20 2016 27043410 GSE77029
Launch Viewer Launch Notebook RNA-sequencing of single whole cells and nuclei from mouse dentate granule cells 171 mouse Jan 21 2016 27090946 GSE77067
Launch Viewer Launch Notebook Batch effects and the effective design of single-cell gene expression studies 861 human Jan 27 2016 28045081 GSE77288
Launch Viewer Launch Notebook Loss of CSL unlocks a hypoxic response and enhanced tumor growth potential in breast cancer cells 404 human Jan 27 2016 27066863 GSE77308
Launch Viewer Launch Notebook Single Novel single cell assay reveals progressive lymphoid defect in aging multipotent hematopoietic progenitors cell RNA-seq reveals LMPP clonal dynamics in aging. 129 mouse Feb 09 2016 27811054 GSE77740
Launch Viewer Launch Notebook Dnmt3a haploinsufficiency transforms Flt3-ITD myeloproliferative disease into a rapid, spontaneous, and fully-penetrant acute myeloid leukemia (Single Cell RNA-Seq) 96 mouse Feb 11 2016 27016502 GSE77847
Launch Viewer Launch Notebook Use of the Fluidigm C1 platform for RNA sequencing of single mouse pancreatic islet cells 621 mouse Feb 17 2016 26951663 GSE77980
Launch Viewer Launch Notebook p53 is a critical regulator of airway epithelial progenitor cell homeostasis. 146 mouse Feb 17 2016 27880895 GSE78045
Launch Viewer Launch Notebook Molecular phenotyping of multiple mouse strains under metabolic challenge uncovers Elovl2 as a novel regulator of glucose-induced insulin secretion 338 mouse Feb 22 2016 28377873 GSE78183
Launch Viewer Launch Notebook Transcriptome profiling in knock-in mouse models of Huntington's disease (cortex_mRNA). 95 mouse Feb 24 2016 26900923 GSE78272
Launch Viewer Launch Notebook CEL-Seq2: sensitive highly-multiplexed single-cell RNA-Seq 175 human Mar 01 2016 27121950 GSE78779
Launch Viewer Launch Notebook Single cell transcriptome analysis of mouse thoracic sympathetic ganglia 298 mouse Mar 02 2016 27571008 GSE78845
Launch Viewer Launch Notebook Effective Detection of Variation in Single Cell Transcriptome using MATQ-seq 91 human Mar 07 2016 28092691 GSE78968
Launch Viewer Launch Notebook Visualizing germinal center B cell dynamics at single cell transcriptome resolution 182 mouse Mar 11 2016 GSE79096
Launch Viewer Launch Notebook SC3-consensus clustering of single cell RNA-Seq data 162 human Mar 11 2016 28346451 GSE79102
Launch Viewer Launch Notebook Identification of preoptic sleep-promoting neurons based on projection target 84 mouse Mar 11 2016 28514446 GSE79108
Launch Viewer Launch Notebook Repression of interstitial cell identity in nephron progenitor cells by Pax2 establishes the nephron-interstitium lineage boundary throughout mammalian kidney development 237 mouse Mar 11 2016 28535371 GSE79137
Launch Viewer Launch Notebook Parental allele specific single-cell transcriptome dynamics reveal incomplete epigenetic reprogramming in human female germ cells 106 human Mar 16 2016 29760424 GSE79280
Launch Viewer Launch Notebook A blood RNA signature for tuberculosis disease risk: a prospective cohort study 355 human Mar 17 2016 27017310 GSE79362
Launch Viewer Launch Notebook Single-cell RNAseq of mouse brain tissues across 3 developmental time points 333 mouse Mar 18 2016 GSE79374
Launch Viewer Launch Notebook Single-cell RNA-seq Reveals Unique Vascular Smooth Muscle Cell Phenotypes in Culture 67 mouse Mar 21 2016 GSE79436
Launch Viewer Launch Notebook Converting adult pancreatic α-cells into β-cells by targeting Dnmt1 and Arx 182 mouse Mar 21 2016 GSE79457
Launch Viewer Launch Notebook Hypothalamic transcriptome of male mice on high fat diet, from 99 strains 282 mouse Mar 23 2016 GSE79551
Launch Viewer Launch Notebook NextGen Consortium: GENESiPS Study: Identifying the Gene Networks of Insulin Resistance 317 human Mar 28 2016 28017796 GSE79636
Launch Viewer Launch Notebook Microglia development follows a stepwise program to regulate brain homeostasis - RNA seq 91 mouse Apr 01 2016 27338705 GSE79812
Launch Viewer Launch Notebook Single-nucleus RNA-seq on undifferentiated human KD3 myoblasts and differentiated myotubes and mononucleated cells. 229 human Apr 04 2016 27566152 GSE79920
Launch Viewer Launch Notebook Single-Cell Analysis Uncovers Clonal Acinar Cell Heterogeneity in the Adult Pancreas 108 mouse Apr 07 2016 27923766 GSE80032
Launch Viewer Launch Notebook Single cell sequencing of Dgcr8 knockout embryonic stem cells plus/minus miR-294 or let-7 232 mouse Apr 12 2016 28102192 GSE80168
Launch Viewer Launch Notebook Smart-seq2 analysis of P17 FACS sorted retinal cells from the Tg(Chx10-EGFP/cre,-ALPP)2Clc or Vsx2-GFP transgenic line 260 mouse Apr 13 2016 27565351 GSE80232
Launch Viewer Launch Notebook mRNA expression of breast cancer cell lines across different densities [SCRB-Seq] 85 human Apr 14 2016 27135972 GSE80297
Launch Viewer Launch Notebook A multi-step transcriptional and chromatin cascade underlies motor neuron programming 887 mouse Apr 20 2016 27939218 GSE80483
Launch Viewer Launch Notebook RNA-sequencing of human post-mortem brain tissues 281 human Apr 25 2016 28754123 GSE80655
Launch Viewer Launch Notebook Xist-dependent imprinted X inactivation and the early developmental consequences of its failure 182 mouse Apr 29 2016 28134930 GSE80810
Launch Viewer Launch Notebook Next Generation Sequencing (RNAseq) of non-small cell lung cancer 218 human May 04 2016 29282718 GSE81089
Launch Viewer Launch Notebook Multilineage communication regulates human liver bud self-organization from pluripotency I 765 human May 09 2016 27669147 28614297 GSE81252
Launch Viewer Launch Notebook A multi-step transcriptional and chromatin cascade underlies motor neuron programming (single-cell RNA-seq) 310 mouse May 10 2016 27939218 GSE81275
Launch Viewer Launch Notebook Mapping heterogeneity in a patient-derived melanoma culture by single-cell RNA-seq 307 human May 12 2016 27903987 GSE81383
Launch Viewer Launch Notebook Zika Virus Disrupts Phospho-TBK1 Localization and Mitosis in Human Neural Stem Cell Model Systems 1459 human May 16 2016 27568284 GSE81475
Launch Viewer Launch Notebook Single cell transcriptome analysis of human pancreas reveals transcriptional signatures of aging and somatic mutation patterns. 2544 human May 18 2016 28965763 GSE81547
Launch Viewer Launch Notebook RNA Sequencing of Single Human Islet Cells Reveals Type 2 Diabetes Genes 1598 human May 18 2016 27667665 GSE81608
Launch Viewer Launch Notebook Characterisation of EZH2-deficient human embryonic stem cells [single cell RNA-seq] 221 human May 20 2016 27926872 GSE81673
Launch Viewer Launch Notebook The transcriptional landscape of mouse blood stem/progenitor cell transitions at single cell resolution 3434 mouse May 20 2016 27365425 GSE81682
Launch Viewer Launch Notebook Multiplexed engineering and analysis of endogenous enhancer activity in single cells: Mosaic-Seq of 15 SEs, 71 HSs, 241 sgRNAs 60 human May 23 2016 28416141 GSE81750
Launch Viewer Launch Notebook Next generation sequencing of esophageal squamous cell carcinoma (ESCC) cell line KYSE-180 single cell transcriptomes for radio-resistance analysis 314 human May 24 2016 GSE81812
Launch Viewer Launch Notebook Smart-seq2 analysis of P17 FACS sorted retinal cells from the Kcng4-cre;stop-YFP X Thy1-stop-YFP Line#1 mice 343 mouse May 25 2016 27565351 GSE81903
Launch Viewer Launch Notebook Single cell RNA-sequencing of retinal bipolar cells 611 mouse May 25 2016 27565351 GSE81905
Launch Viewer Launch Notebook Identification of a Transcription Factor that Promotes Spermatogonial Stem Cell Establishment 188 mouse Jun 02 2016 27681428 GSE82174
Launch Viewer Launch Notebook Cellular Taxonomy of the Mouse Striatum as Revealed by Single-Cell RNAseq 1208 mouse Jun 02 2016 27425622 GSE82187
Launch Viewer Launch Notebook Identification of rare, dormant and therapy resistant stem cells in acute lymphoblastic leukemia 155 human Jun 09 2016 27916615 GSE83142
Launch Viewer Launch Notebook Single-Cell RNAseq Reveals That Pancreatic β-Cells From Very Old Male Mice Have a Young Gene Signature 207 mouse Jun 09 2016 27466694 GSE83146
Launch Viewer Launch Notebook Phenotype-driven precision oncology in patient-derived tumor models predict therapeutic response in squamous cell carcinoma 147 human Jul 12 2016 GSE84323
Launch Viewer Launch Notebook Dynamics of chromatin marks and the role of JMJD3 during pancreatic endocrine cell fate commitment 227 mouse Jul 12 2016 29559448 GSE84324
Launch Viewer Launch Notebook Single-Cell RNAseq analysis of diffuse neoplastic infiltrating cells at the migrating front of human glioblastoma 3500 human Jul 15 2016 29091775 GSE84465
Launch Viewer Launch Notebook Innate to adaptive: Human IFN-gamma producing CD4+ T cells can derive directly from CXCL8-producing recent thymic emigrants. 92 human Jul 21 2016 28754679 GSE84686
Launch Viewer Launch Notebook Sequential loss of plasticity during trophectoderm and inner cell mass lineage segregation in the mouse embryo 262 mouse Jul 27 2016 28226240 GSE84892
Launch Viewer Launch Notebook Inference of differentiation time for single cell transcriptomes using cell population reference data 113 mouse Aug 05 2016 29187729 GSE85234
Launch Viewer Launch Notebook Partially exhausted CD8+ T cells are associated with clinically beneficial response to Teplizumab in new onset type I diabetes (single-cell RNA-seq of sorted CD8+ T-cells) 219 human Aug 12 2016 GSE85527
Launch Viewer Launch Notebook Single Cell Transcriptome Conservation in Cryopreserved Cells and Tissues 1486 human Aug 12 2016 28249587 GSE85534
Launch Viewer Launch Notebook Partially exhausted CD8+ T cells are associated with clinically beneficial response to Teplizumab in new onset type I diabetes 384 human Aug 12 2016 GSE85573
Launch Viewer Launch Notebook Laminin-guided highly efficient endothelial commitment from human pluripotent stem cells [Single Cell RNA-Seq] 92 human Aug 18 2016 27804979 GSE85783
Launch Viewer Launch Notebook Laminin-guided highly efficient endothelial commitment from human pluripotent stem cells 110 human Aug 18 2016 27804979 GSE85784
Launch Viewer Launch Notebook Single-cell alternative splicing analysis with Expedition reveals splicing dynamics during neuron differentiation 214 human Aug 22 2016 28673540 GSE85908
Launch Viewer Launch Notebook Single cell RNA-seq data of human hESCs to evaluate SCnorm: robust normalization of single-cell rna-seq data 414 human Aug 22 2016 28418000 GSE85917
Launch Viewer Launch Notebook A distinct gene module uncouples dysfunction from activation in tumor-infiltrating T cells (batch 1) 287 mouse Aug 24 2016 27610572 GSE86028
Launch Viewer Launch Notebook A distinct gene module uncouples dysfunction from activation in tumor-infiltrating T cells (batch 3) 322 mouse Aug 24 2016 27610572 GSE86030
Launch Viewer Launch Notebook A distinct gene module uncouples dysfunction from activation in tumor-infiltrating T cells (batch 4) 349 mouse Aug 24 2016 27610572 GSE86031
Launch Viewer Launch Notebook A distinct gene module uncouples dysfunction from activation in tumor-infiltrating T cells (batch 2) 329 mouse Aug 25 2016 27610572 GSE86039
Launch Viewer Launch Notebook A distinct gene module uncouples dysfunction from activation in tumor-infiltrating T cells 1287 mouse Aug 25 2016 27610572 GSE86042
Launch Viewer Launch Notebook Transcriptome analysis of tetraploid cells identifies Cyclin D2 as a facilitator of adaptation to genome doubling in the presence of p53 53 human Aug 26 2016 27559130 GSE86105
Launch Viewer Launch Notebook Differences and similarities between human and chimpanzee neural progenitors during cerebral cortex development 52 human Aug 29 2016 27669147 GSE86207
Launch Viewer Launch Notebook Single-cell RNA-sequencing of murine atrioventricular node macrophages 76 mouse Aug 31 2016 28431249 GSE86310
Launch Viewer Launch Notebook Pseudotemporal ordering of single cells reveals metabolic control of postnatal beta cell proliferation 416 mouse Sep 06 2016 28467932 GSE86479
Launch Viewer Launch Notebook Single Cell RNA-Sequencing Identifies Diverse Roles of Epithelial Cells in Idiopathic Pulmonary Fibrosis 540 human Sep 09 2016 27942595 GSE86618
Launch Viewer Launch Notebook REGION-SPECIFIC NEURAL STEM CELL LINEAGES REVEALED BY SINGLE-CELL RNA-SEQ FROM HUMAN EMBRYONIC STEM CELLS [Cel-seq] 2654 human Sep 15 2016 GSE86977
Launch Viewer Launch Notebook REGION-SPECIFIC NEURAL STEM CELL LINEAGES REVEALED BY SINGLE-CELL RNA-SEQ FROM HUMAN EMBRYONIC STEM CELLS [Smart-seq] 1794 human Sep 15 2016 GSE86982
Launch Viewer Launch Notebook Single-cell RNA Sequencing Uncovers A Close Relationship Between Differentiating Dopamine and Subthalamic Nucleus Neuronal Lineages 574 mouse Sep 19 2016 28094018 GSE87069
Launch Viewer Launch Notebook Human naïve pluripotent stem cells exhibit X chromosome dampening and X-inactivation (single cell RNA-Seq) 251 human Sep 22 2016 27989770 GSE87237
Launch Viewer Launch Notebook Human naive pluripotent stem cells exhibit X chromosome dampening and X-inactivation 265 human Sep 22 2016 27989770 GSE87239
Launch Viewer Launch Notebook Molecular architecture underlying fluid absorption by the developing inner ear 213 mouse Sep 23 2016 28994389 GSE87293
Launch Viewer Launch Notebook In Vitro Derivation and Propagation of Spermatogonial Stem Cell Activity from Mouse Pluripotent Stem Cells 108 mouse Sep 26 2016 27926879 GSE87341
Launch Viewer Launch Notebook Deciphering Pancreatic Islet β Cell and α Cell Maturation Pathways and Characteristic Features at the Single-Cell Level 931 mouse Sep 27 2016 28467935 GSE87375
Launch Viewer Launch Notebook Analysis of germline modifiers of aggressive prostate cancer using cross-species variation and systems genetics 299 human Sep 29 2016 27916600 GSE87491
Launch Viewer Launch Notebook Single Cell RNA-Sequencing using smart-seq2 of young and old murine hematopoietic stem cells 972 mouse Oct 05 2016 28538171 GSE87631
Launch Viewer Launch Notebook Term placenta single cell transcriptome 86 human Oct 06 2016 28174237 GSE87720
Launch Viewer Launch Notebook Term placenta transcriptomes 90 human Oct 06 2016 28174237 GSE87726
Launch Viewer Launch Notebook Single-cell transcriptome analysis of mouse fetal livers from different developmental stages 505 mouse Oct 11 2016 29202695 GSE87795
Launch Viewer Launch Notebook The Nature and Nurture of Cell Heterogeneity: Accounting for Macrophage Gene-environment Interactions with Single-cell RNA-Seq 430 human Oct 11 2016 28061811 GSE87849
Launch Viewer Launch Notebook Assessing characteristics of RNA amplification methods for single cell RNA sequencing 138 human Oct 17 2016 27881084 GSE88850
Launch Viewer Launch Notebook Impact of hypothermic preservation of mouse kidney resident immune cells 494 mouse Oct 19 2016 29439658 GSE88953
Launch Viewer Launch Notebook Single-cell RNA-seq reveals heterogeneity within human pre-cDCs 452 human Oct 27 2016 27864467 GSE89232
Launch Viewer Launch Notebook Early transcriptional and epigenetic regulation of CD8+ T cell differentiation revealed by single-cell RNA-seq 304 mouse Nov 01 2016 28218746 GSE89405
Launch Viewer Launch Notebook Transcriptomic profiling maps anatomically patterned subpopulations among single embryonic cardiac cells 741 mouse Nov 02 2016 GSE89468
Launch Viewer Launch Notebook Single-cell profiling of tumor infiltrating T cells 303 mouse Nov 03 2016 29101163 GSE89477
Launch Viewer Launch Notebook PC1/3 deficiency impacts POMC processing in human embryonic stem cell-derived hypothalamic neurons 95 human Nov 03 2016 28132887 GSE89503
Launch Viewer Launch Notebook Defining lineage potential and fate behavior of precursors during pancreas development 620 mouse Nov 14 2016 GSE89798
Launch Viewer Launch Notebook Proliferation pause as an early blockade of human cellular reprogramming toward pluripotency [single cell RNA-seq analysis] 192 human Nov 17 2016 GSE90014
Launch Viewer Launch Notebook Proliferation pause as an early blockade of human cellular reprogramming toward pluripotency 198 human Nov 17 2016 GSE90015
Launch Viewer Launch Notebook A single-cell transcriptomic analysis reveals precise pathways and regulatory mechanisms underlying hepatoblast differentiation 547 mouse Nov 18 2016 28681484 GSE90047
Launch Viewer Launch Notebook Species-Specific Developmental Timing is Maintained by Pluripotent Stem Cells Ex Utero 50 human Nov 18 2016 28179190 GSE90053
Launch Viewer Launch Notebook lncRNA dependencies in acute myeloid leukemia 64 human Nov 18 2016 28875933 GSE90072
Launch Viewer Launch Notebook Molecular reprogramming of granulocyte/macrophage progenitor (GMP) clusters upon 5-Fluorouracil (5-FU) treatment 431 mouse Nov 22 2016 28355185 GSE90140
Launch Viewer Launch Notebook Dissecting immune circuits by linking CRISPR pooled screens with single cell RNA-seq [SET1] 62 mouse Nov 24 2016 27984734 GSE90486
Launch Viewer Launch Notebook Heterogeneity of neuroblastoma cell identity revealed by transcriptional circuitries 36 human Nov 30 2016 28740262 GSE90683
Launch Viewer Launch Notebook Induced Pluripotent Stem Cell Differentiation Provides an Approach for Functional Validation of GWAS Variants in Metabolic Disease 205 human Dec 01 2016 GSE90749
Launch Viewer Launch Notebook Molecular reprogramming of granulocyte/macrophage progenitor (GMP) clusters upon induction of BCR/ABL oncogene 323 mouse Dec 02 2016 28355185 GSE90797
Launch Viewer Launch Notebook A neural basis for melanocortin-4 receptor-regulated appetite. 61 mouse Dec 02 2016 25915476 GSE90809
Launch Viewer Launch Notebook Single cell analysis of SFTPC+ cells and CPM-high progenitor cells derived from human induced pluripotent stem cells (hiPSCs) 476 human Dec 02 2016 28967890 GSE90813
Launch Viewer Launch Notebook Epithelial-Mesenchymal Micro-Niches Govern Stem Cell Lineage Choices (SC RNA-Seq) 993 mouse Dec 04 2016 28413068 GSE90848
Launch Viewer Launch Notebook Mex3a Marks a Slowly Dividing Subpopulation of Lgr5+ Intestinal Stem Cells 377 mouse Dec 05 2016 28285904 GSE90856
Launch Viewer Launch Notebook Transcriptomic and anatomic parcellation of 5-HT3AR expressing cortical interneuron subtypes revealed by single-cell RNA sequencing 223 mouse Dec 05 2016 28134272 GSE90860
Launch Viewer Launch Notebook A single-cell survey of the small intestinal epithelium 1758 mouse Dec 13 2016 29144463 GSE92332
Launch Viewer Launch Notebook Heterogeneity of hypothalamic Pro-opiomelanocortin-expressing neurons revealed by single-cell RNA sequencing 163 mouse Dec 21 2016 GSE92707
Launch Viewer Launch Notebook Single cell mRNAseq of Olfactory Epithelium and Neurog1-eGFP+ progenitors 400 mouse Dec 22 2016 29174332 GSE92842
Launch Viewer Launch Notebook Pooled CRISPR screening with single-cell transcriptome read-out 86 human Dec 23 2016 28099430 GSE92872
Launch Viewer Launch Notebook Single cell gene expression in Dlxi1/2b::eGFP+ cells before and after migration, 2 weeks 229 human Jan 09 2017 28445465 GSE93321
Launch Viewer Launch Notebook Antagonistic activities of Sox2 and Brachyury control the fate choice of neuro-mesodermal progenitors 62 mouse Jan 11 2017 28826820 GSE93524
Launch Viewer Launch Notebook Single cell RNAseq characterization of cell types produced over time in an in vitro model of human inhibitory interneuron differentiation. 1733 human Jan 13 2017 28279351 GSE93593
Launch Viewer Launch Notebook Profiling of Ileal Transcriptome in Pediatric Crohn Disease 245 human Jan 13 2017 28805827 GSE93624
Launch Viewer Launch Notebook RNA editing is the essential function of ADAR1 and, in the absence of MDA5, is dispensable for normal adult homeostasis 60 mouse Feb 01 2017 28874170 GSE94389
Launch Viewer Launch Notebook Embryonic stem cells-derived neural progenitor cells 140 mouse Feb 06 2017 28361918 GSE94579
Launch Viewer Launch Notebook Single cell RNA expression of mouse embryonic basal forebrain 225 mouse Feb 07 2017 28361918 GSE94641
Launch Viewer Launch Notebook Applied topology delineates developmental progression with single-cell resolution 1893 mouse Feb 14 2017 28459448 GSE94883
Launch Viewer Launch Notebook Single-cell RNA Sequencing as a tool for simultaneous shRNA detection and transcriptome analysis in the context of functional shRNA screens 355 human Feb 16 2017 29138277 GSE94979
Launch Viewer Launch Notebook Single-cell RNA-Sequencing of IMR90 fibroblasts bypassing reprogramming-induced senescence 319 human Feb 16 2017 29138277 GSE94980
Launch Viewer Launch Notebook Coupling shRNA screening with single-cell RNA-Seq identifies mechanisms regulating senescence during reprogramming 299 human Feb 17 2017 29138277 GSE95020
Launch Viewer Launch Notebook Coupling shRNA screens with single-cell RNA-Seq identifies mechanisms regulating senescence during reprogramming 1030 human Feb 17 2017 29138277 GSE95021
Launch Viewer Launch Notebook PDGF-driven glioblastoma mouse model scRNA-Seq 85 mouse Feb 21 2017 GSE95157
Launch Viewer Launch Notebook Single cell RNA-seq of 186 basal and luminal epithelial cells from the mammary gland of adult mice 160 mouse Feb 27 2017 29158510 GSE95432
Launch Viewer Launch Notebook Single cell RNA-seq of 346 epithelial cells from the mammary glands of pre-pubescent, pubescent and adult mice 305 mouse Feb 27 2017 29158510 GSE95434
Launch Viewer Launch Notebook Single cell RNA-seq of 278 epithelial cells from the mammary glands of pregnant and non-pregnant mice 226 mouse Feb 27 2017 29158510 GSE95436
Launch Viewer Launch Notebook Single cell RNA-seq of 444 epithelial cells from the mammary glands of pubescent and adult mice 406 mouse Feb 27 2017 29158510 GSE95445
Launch Viewer Launch Notebook Single cell RNA-seq of 312 basal epithelial cells from the mammary glands of pregnant and adult mice 269 mouse Feb 27 2017 29158510 GSE95448
Launch Viewer Launch Notebook Olfactory stem cell differentiation: horizontal basal cell (HBC) lineage 803 mouse Mar 02 2017 28506465 GSE95601
Launch Viewer Launch Notebook Tracing the temporal-spatial transcriptomic landscapes of the human fetal digestive tract by single cell RNA-seq analysis [fetal tissues] 407 human Mar 02 2017 29802404 GSE95630
Launch Viewer Launch Notebook High throughput quantitative whole transcriptome analysis of individual macrophages 7 days post-pneumonectomy in a B6 CSF1R-GFP mouse 73 mouse Mar 11 2017 GSE96104
Launch Viewer Launch Notebook Single cell RNA-sequencing of day 15 cells derived from the directed differentiation of human iPSCs towards lung epithelium 145 human Mar 11 2017 28463226 GSE96106
Launch Viewer Launch Notebook Single cell RNA-seq reveals expansion of IGRP-reactive CD4+ T cells in recent onset type I diabetes (single-cell RNA-seq of CD4+ pooled islet antigen-reactive T cells) 246 human Mar 13 2017 28566371 GSE96568
Launch Viewer Launch Notebook Single cell RNA-seq reveals expansion of IGRP-reactive CD4+ T cells in recent onset type I diabetes 291 human Mar 13 2017 28566371 GSE96569
Launch Viewer Launch Notebook Single-cell transcriptome analysis of EpCAM+ cells from P3.25 mouse fetal livers 52 mouse Mar 15 2017 GSE96630
Launch Viewer Launch Notebook The effect of upper-respiratory infection on transcriptomic changes in the CNS 45 mouse Mar 21 2017 28696309 GSE96870
Launch Viewer Launch Notebook Multilineage communication regulates human liver bud self-organization from pluripotency II 79 human Mar 23 2017 28614297 GSE96981
Launch Viewer Launch Notebook Targeted reconstruction of T cell receptor sequence from single cell RNA-seq links CDR3 length to T cell differentiation state 89 human Mar 24 2017 28934479 GSE96993
Launch Viewer Launch Notebook Functional Characterization of Human Pluripotent Stem Cell-derived Arterial Endothelial Cells 83 mouse Apr 04 2017 GSE97381
Launch Viewer Launch Notebook Single-cell RNA-seq of NR5A1-eGFP positive cells of the developing mouse testis from E10.5 to E16.5 429 mouse Apr 07 2017 29425512 GSE97519
Launch Viewer Launch Notebook Single-cell transcriptomics of East-Asian pancreatic islets cells 222 human Apr 11 2017 28694456 GSE97655
Launch Viewer Launch Notebook Gene expression signature of vemurafenib resistance in WM989 and WM983B melanoma cells 122 human Apr 12 2017 28607484 GSE97681
Launch Viewer Launch Notebook Single cell analysis of atherosclerosis baseline and regression macrophages-surgical model 244 mouse Apr 18 2017 28650342 GSE97941
Launch Viewer Launch Notebook Mapping the human DC lineage through the integration of high dimensional techniques 92 human Apr 20 2017 28473638 GSE98011
Launch Viewer Launch Notebook Single cell RNA-seq of basal, luminal and total epithelial cells from the mammary glands of female mice 1366 mouse Apr 24 2017 29158510 GSE98131
Launch Viewer Launch Notebook Single cell sequencing of primary dorsal root ganglia from CAST/Ei or C57BL/6 mouse highlights strain differences in cellular populations. 456 mouse May 01 2017 28768198 GSE98415
Launch Viewer Launch Notebook A versatile approach for assessing human stem cell-derived retinal progeny using single cell transcriptomics 534 human May 04 2017 29230913 GSE98556
Launch Viewer Launch Notebook High throughput single-cell whole transcriptome analysis of induced cardiomyocytes during direct cardiac reprogramming [RNA-seq] 566 mouse May 04 2017 29072293 GSE98567
Launch Viewer Launch Notebook Telomere heterogeneity linked to metabolism and pluripotency state revealed by simultaneous measurement of telomere length and RNA-seq in the same human ES cell 111 human May 08 2017 GSE98644
Launch Viewer Launch Notebook Single-cell full-length total RNA sequencing uncovers dynamics of recursive splicing and enhancer RNAs 1484 mouse May 08 2017 29434199 GSE98664
Launch Viewer Launch Notebook A practical solution for preserving single cells for RNA sequencing 252 human May 09 2017 29391536 GSE98734
Launch Viewer Launch Notebook Single cell RNA-seq of mouse brain vascular transcriptomes 3186 mouse May 11 2017 29443965 GSE98816
Launch Viewer Launch Notebook Single cell RNA sequencing of peanut-responsive T cells 431 human May 12 2017 29408715 GSE98852
Launch Viewer Launch Notebook Single cell RNA-seq identifies a unique microglia type associated with Alzheimer’s disease [RNA] 97 mouse May 16 2017 28602351 GSE98969
Launch Viewer Launch Notebook Single cell RNA-seq of mouse brain astrocyte transcriptomes 250 mouse May 18 2017 29443965 GSE99058
Launch Viewer Launch Notebook Single-cell RNA-seq reveals differentiation hierarchy of normal human bone marrow and a distinct transcriptome signature of aneuploid cells 1202 human May 19 2017 29030335 GSE99095
Launch Viewer Launch Notebook Olfactory stem cell-mediated regeneration: horizontal basal cell (HBC) lineage [scRNA-seq] 1271 mouse May 24 2017 29174333 GSE99251
Launch Viewer Launch Notebook A comparison between single cell RNA sequencing and single molecule RNA FISH for rare cell analysis 193 human May 25 2017 GSE99330
Launch Viewer Launch Notebook Transcriptomes of major renal collecting duct cell types in mouse identified by single-cell RNA-Seq 262 mouse Jun 05 2017 29089413 GSE99701
Launch Viewer Launch Notebook Single-cell RNA-seq reveals a subpopulation of prostate cancer cells with enhanced cell cycle-related transcription and attenuated androgen response 147 human Jun 07 2017 29233929 GSE99795
Launch Viewer Launch Notebook Quartz-Seq2: a high-throughput single-cell RNA-sequencing method that effectively uses limited sequence reads 74 mouse Jun 09 2017 29523163 GSE99866
Launch Viewer Launch Notebook Maturation of Human iPSC-derived Astrocytes in 3D Cortical Spheroids 726 human Jun 12 2017 28817799 GSE99951
Launch Viewer Launch Notebook Epidermal Wnt signaling regulates transcriptome heterogeneity and proliferative fate in neighboring cells 273 mouse Jun 13 2017 29334988 GSE99989