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Gene-list enrichment analysis against the manual database

ChEA Tutorial
This feature of ChEA is no longer supported. Please use Enrichr. Thank you.
An article that describes the ChEA system and its application: Lachmann A, Xu H, Krishnan J, Berger SI, Mazloom AR, Ma'ayan A. ChEA: Transcription Factor Regulation Inferred from Integrating Genome-Wide ChIP-X Experiments. Bioinformatics. 2010 Aug 13. [Epub ahead of print] |
| Ma'ayan Laboratory | Systems Biology Center New York | Mount Sinai School of Medicine |
Other related software and databases developed by the Ma'ayan Lab: KEA | GATE | Lists2Networks | Genes2Networks |
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Try these other tools developed by the Ma'ayan Lab:
Enrichr- Analyze Gene Lists with over 30 Gene Set Libraries Drug Pair Seeker- Identify Pairs of Drugs that can Reverse or Mimic Gene Expression Patterns ChIP-X Enrichment Analysis- Database of Transcription Factors and their Target Genes extracted from ChIP-seq and ChIP-chip studies Kinase Enrichment Analysis- Database of Literature-Based Kinase Substrate Interactions LINCS Canvas Browser- Query and Visualize 1000's of L1000 Experiments GATE- Desktop Application for Gene Expression Time-Series Data Analysis Genes2FANs- Tools to Build Networks from List of Genes Sets2Networks- Tool to Build Networks from Gene-Set Libraries Expression2Kinases- Tool to Infer Cell Signaling Pathways from Sets of Differentially Expressed Genes Lists2Networks- Web-Based Platform for Performing Gene Set Enrichment Analyses Genes2Networks- Tool to Build Protein-Protein Interaction Networks from Lists of Genes ESCAPE- Database that Collects, Organizes and Visualizes High-Content Data from Embryonic Stem Cell Research