Collections

This area lists all collections of gene signatures, both approved and not. An approved report is one for which the Ma'ayan Lab either collected the signatures or quality controlled the collection in some way.

Tag Signatures Approved
MCF7_BD2K_LINCS_DCIC_COURSERA 155 Yes
AGING_BD2K_LINCS_DCIC_COURSERA 244 Yes
TNF 1
LIGANDS 49
SKIN 1
INFLIXIMAB 2
NSAID 138 Yes
ACETYLSALICYLIC ACID 1
RESVERATROL 1
MOUSE 24
MESENCHYME-2-STALK 0
MESENCHYME-2-TIP 0
MESENCHYME-2-BUD 0
RAT 4
ALL-CAPS 1
DRUG 4 Yes
CIGARETTE 2
SMOKE 2
TOBACCO 2
DEXAMETHASONE 103 Yes
T-ALL 1
GR 4
GLUCOCORTICOID 4 Yes
GH 2
LINCS_MCF10A 102 Yes
RUES2 2
PREGNANCY 1
ISLET 1
LQTS 101 Yes
TAMOXIFEN 66 Yes
STEMCELLS 1
TIME_COURSE 5
GSE5106 1
TESTOSTERONE 2
FIBROBLAST_DP 5 Yes
TRAUMA_BD2K_LINCS_DCIC_COURSERA 1
0.5GY 4 Yes
17.5_GY_RADIATION 4 Yes
GEO_WEEKLY_ANALYSIS 33
SINGLE_GENE_PERTURBATION 3 Yes
OVEREXPRESSION 3
SURVIVORS 10 Yes
NON_SURVIVORS 10 Yes
AGING 32 Yes
BRAIN 2
PROGERIA 1
MEPENZOLATE 4
VEMURAFENIB 16 Yes
CLOZAPINE 2
HALOPERIDOL 6 Yes
SUNITINIB 11 Yes
PHENYLEPHRINE 3 Yes
FLUOXETINE 1
OLANZAPINE 1
CLOZAPIN 1
ISOPROTERENOL 4 Yes
NOREPINEPHRINE 1
KLRB1 2
ADRENERGY 1
KNOCKOUT 4 Yes
HES1 1
DELETION 2
TERF2 1
DIABETIC_NEPHROPATHY 27 Yes
OVER-EXPRESSION 1
HOXB7 1
FOXD3 4 Yes
NFATC3 2
RISPERIDONE 3 Yes
LITHIUM 6 Yes
TRABECTEDIN 1
TREATMENT 1
CBD 1
DIABETES 4
ABDOMINAL_AORTIC_ANEURYSM 5 Yes
ICL 13
DIABETEST1 10 Yes
DIABETEST2 9 Yes
ACHROMATOPSIA 2
ACOUSTIC_NEUROMA 1
ADENOCARCINOMA 3 Yes
CALORIC_RESTRICTION 6 Yes
HEART 3
GASTROCNEMIUS 2
MUSCLE 1
SKELETAL 1
NEOCORTEX 1
FAT 1
HOMO 0
SAPIENS 0
ATHEROSCLEROSIS 2
DTOXS 77 Yes
BIOGPS_HUMAN 84 Yes
TCGA_KIDNEY_CHROMOPHOBE_(KICH) 66 Yes
TCGA_KIDNEY_RENAL_CLEAR_CELL_CARCINOMA_(KIRC) 529
TCGA_ADRENOCORTICAL_CARCINOMA_(ACC) 78 Yes
TCGA_MESOTHELIOMA_(MESO) 36 Yes
BIOGPS_MOUSE 74 Yes
ALS 47 Yes
HUNTINGTON 57 Yes
BIOGPS_NCI60 108 Yes
NEUROLINCS_ALS 5 Yes
NEUROLINCS_SMA 5 Yes
NICOTINE 11 Yes
GEODISEASE 202
AGING_BRAIN 58 Yes
AGE 1
SULFASALAZINE 4 Yes
NAPROXEN 1
DRUGS 22
ACETAMINOPHEN 19
RITUXIMAB 1
CEDIRANIB 1
TRASTUZUMAB 1
PERTUZUMAB 1
TEMOZOLOMIDE 1
PPM-201 8
SCHIZOPHRENIA 18 Yes
D-SERINE 5
MELANOMA_PERTURBATION 52
DEPLETION 1
KNOCKDOWN 1
MELANOMA_TISSUE 4
MELANOMA 12 Yes
TKI 150 Yes
BOSUTINIB 2
DASATINIB 4 Yes
CRIZOTINIB 3
DABRAFENIB 6 Yes
TRAMETINIB 1
SORAFENIB 10 Yes
GEO_MONTHLY_ANALYSIS 66
NILOTINIB 2
ERLOTINIB 15 Yes
SCLEROSIS 9 Yes
LAPATINIB 14 Yes
SCLERODERMA 2
IMATINIB 36 Yes
RUXOLITINIB 11 Yes
CARCINOMA 5
GEFITINIB 9 Yes
AFATINIB 3 Yes
TOFACITINIB 6 Yes
FGFR 17
MEK 1
PI3K 1
POLYCYSTIC_OVARIAN_SYNDROME 1
MAJOR_DEPRESSIVE_DISORDER 1
COCAINE 4
ALCOHOLIC_LIVER_DISEASE 21
MELANOMA_PETURBATION 0
PARKINSON 26 Yes
PARKINSON_GENE_PERTURBATION 9 Yes
PARKINSON_HEALTHY_DISEASE 18 Yes
PARKINSON_RELATED 2
SLICR_TEST 15
AGING_PHILLIP 87 Yes
IMATINIB_MSP1 3
SPINAL_MUSCULAR_ATROPHY(SMA) 12
THIAZOLIDINEDIONE 94 Yes
ROSIGLITAZONE 90 Yes
PIOGLITAZONE 1
TROGLITAZONE 1
METFORMIN 15 Yes
PPARG 11 Yes
SIRT1 37
CD34+CELLS 1
YY1 7 Yes
NON-SMALLCELLLUNGCANCER 1
LIGANDS_BD2K_LINCS_DCIC_COURSERA 275 Yes
DISEASES_BD2K_LINCS_DCIC_COURSERA 1164
GENES_BD2K_LINCS_DCIC_COURSERA 2363
SSS 1
DRUGS_BD2K_LINCS_DCIC_COURSERA 1110
PATHOGENS_BD2K_LINCS_DCIC_COURSERA 306 Yes
MCF7 2
ASTROCYTES 1
HUMAN 31
HYPOXIA 2
ISCHEMIA 2
NORMOXIA 1
OXLDL 3
TNFA 5 Yes
FENOFIBRATE 2
SHEAR 1
SERUMAMYLOIDA 2
SHRNA 1
IL1 2
OE 2
EC 1
L1000_POL 58
TESTP4 3
RA 3
EXERCISE 1
SLE 2
LPS 2
MONOCYTES 2
4D 1
PRACTICE 1
PROTEOSOMEINHIBITORS 2
REFERENCEMAPS_HUMAN_ES_&IPSC 3
GIULIO_L1000 18 Yes
LAKSHMI_L1000 16 Yes
TP53INP2 1
MCF10A_L1000_ZSVCINF 130
MCF10A_L1000_CHDIR 59
KIDNEY_DISEASE 1
GLOMERULONEPHRITIS 1
EI24 1
IGF1 49
VITAMIN-D 5
AGING_M 64
TEST_TAG 79
TMEM88_DEPLETION 1
TEST 16
BOWEL_DISEASE_SYNDROME 46
IBS 7
IBDVSIBS 2
IBD 15
ULCERATIVE_COLITIS 16
IBD_HEALTHY 18
UC_VS_NORMAL 5
IBS_HEALTHY 2
CROHNS_DISEASE_VS_NORMAL 4
IBS_TREATMENT 1
IBS_NORMAL 1
UC 4
IDB 2
GLIOBLASTOMA 60
IDB_HEALTHY 5
RESISTANT_VS_SENSITIVE 1
DASATINIB_RESISTANT 3
RESISTANT_VS_SENTITIVE 2
CROHN_DISEASE 7
TEST01 1
CHRONS_DISEASE 1
DERMATITS 1
ECZEMA 6
ATOPIC_DERMATITIS_LESIONAL 1
ECZEMA_TREATED 2
ATOPIC_DERMATITIS_NON_LESIONAL 3
ATOPIC_DERMITITIS_LESIONAL 1
TESTING01 59
TESTING2000 60
TESTING1000 60
GLIOBLASTOMA_1000GENES 60
GSE 0
ATOPIC_DERMITITIS 6
ACUTE_DERMITITIS 1
MEFENAMIC_ACID 3
NABUMETONE 2
IBUPROFEN 3
DICLOFENAC 1
NIMESULIDE 1
ACETYLSALICYLIC_ACID 2
ROFECOXIB 6
SULINDAC 2
CELECOXIB 3
RUXOLINITIB 2
GIVINOSTAT 2
GLIOBLASTOMA_GEO 4
GLIOBLASTOMA_GEO_TREATED 4
GLIOBLATOMA_GEO 1
GLIOBLASTOMA_GEO_GENE 1
90
IFN 19
AG 182
IFNGAMMA 28
INFGAMMA 2
TNFGAMMA 3
IFN-DEMO 2
ANDREA_BRANCH 37
TTEST 1
SR-BI 3
HG_AG 11
RESV 2
LINCS-L1000-TRT_CP 292
BRD-K49055432 9
A66 9
BRD-K49468759 6
KIN001-266 6
BRD-K76694128 32
DCC-2036 32
BRD-K50000283 24
PHA-767491 24
BRD-A25736793 42
EVEROLIMUS 42
BRD-K59317601 48
INK-128 48
BRD-K20526256 25
HG-14-10-04 25
BRD-K53417444 32
OTSSP167 32
BRD-U41416256 24
THZ-2-98-01 24
BRD-K44100512 50
KIN001-043 50
LIVER 3
DIET 1
NAFLD 1
AGING_BD2K_AHM_DEMO 1
HIPK2 6
ALCOHOL 2
CIRRHOSIS 1
CC 16
PROSTATE_CANCER 4
MICRO_RNA 1
BREAST_CANCER 12
CONTROL_CANCER 15
ADSTIM 5
TEST_TAG2 1
IMR90CARMEN 1
HUVEC 2
GESTATIONAL 2
TEST1_TAG 1
TEST2_TAG 1
INFLUENZA_GOWTHAMEE 1
TISSUE 1
PANCREATIC 5
VHF 1
HUMAN-VOLUNTEERS 2
WHOLE-BLOOD 9
TIME-COURSE 1
GOWTHAMEE_FG_TEST 1
GOWTHAMEE_FG 16
HEPATITIS 1
A2780 1
H1N1 4
INFLUENZA 12
CHILDREN 1
2009H1N1PANDEMIC 4
INFLUENZA-WITH-SEIZURES 1
SEVERE-INFLUENZA 6
CHILDHOOD 1
PNEUMONIA 1
IN-VITRO 2
PBMC 4
H1N12009PANDEMIC 2
PPRIMARY-TYPE-II-LUNG-EPITHELIALS 1
SEASONAL-H1N1 1
2009PANDEMICH1N1 1
PRIMARY-TYPE-II-LUNG-EPITHELIALS 1
HUMAN-PDC 1
EX-VIVO 4
PRIMARY-BRONCHIAL-EPITHELIAL-CELL 1
SEASONALH1N1 1
PRIMARY-BRONCHIAL-EPITHELIAL-CELLS 1
MACROPHAGES 1
H5N1 1
PRIMARY-HUAMN-BRONCHIAL-EPITHELIAL-CELL 1
HUMAN-MACROPHAGES 1
H3N2 1
HD 1
ALS_GAIA 1
RADIATION_DEATH 0
JUST_TRYING 0
C 1
S 1
SS 1
SSD 1
SA 1
AS 1
DEMO_MCF7 1
BIOCADDIE_DEMO 1
SPACEFLIGHT 3
SIMULATED_MICROGRAVITY 3
OSTEOBLAST 3
1 1
ALI_LITHIUM 1
SNCA 2
1000 1
TAG-TEST 1
HUNTINGTON_SANDHYA 1
SUS1 1
BLADDER 2
CANCER 4
FGFR3 1
MULTIPLE 1
MYELOMA 1
PD173074 2
GSE57639_GEO2 1
GSE59913 1
THALDATA 16
$GENES_BD2K_LINCS_DCIC_COURSERA 2
CLUSTER2UP 1
CLUSTER2DOWN 1
CLUSTER1 1
RUBBISH 2
SIGNATURE 25
ZHANG 1
PANCREATIC_CANCER_HIGH 1
PDAC_LOW 3
24HRUP_TAG 3
LILY_PD_COLLECTION 9
LILY'S_PD_COLLECTION 1
LILY_PD 74
AP_IL13 3
AP_IL13_TEST 1
A02_G2E 5
A02_GSE500 14
A02_G2E1000 6
A02_GSE1000 1
HYPOXIC 1
A02_WENZ 3
A02_WENZM 2
PEZZULO_IL13 8
PEZZULO_IL13_1K 7
NM_1 1
LUNGTHAL 8
LIVERTHAL 14
PROSTATETHAL 3
INTRINSICAGING 6
AGING_AB 8
ASTHMA 1
RA_AB 3
CARDIOMYOPATHY 21
HYPERTENSION 1
NEURODEGENERATION 2
MYOCARDITIS 2
FEMALE 1
LUNG 2
VENTRICLE 2
HYPERTROPHY 1
MCF7_TAG 1
MCF7_BD2K_LINCS__DCIC_COURSERA 1
AGINGINSKELETALMUSCLES 3
MULTIPLESCLEROSIS 1
ISCHEMIC 4
STROKE 4
FEMALEFRONTALCORTEX 1
FRONTALCORTEX 1
CORTEX 0
ALZHEIMER'S 1
CONTROL 2
PATIENTS 2
AUTISM 5
AD 4
TAG 3
RTR 1
YUHJ 1
PSORIASIS 1
THALDATACAN 16
GYG 1
SCA 1
META 5
SIC 1
PATHWAYSIMILARITY_AB 49
21257 0
DMD 1
DATA 6
ALZHEIMERS 2
DEPRESSION 1
NIPAH 3
MCF7_DEMO 1
KNOCKDOWN_AB 27
K 1
KIRAN 1
GEETHA 6
SU 1
RI 1
NIPAV 1
SYK 1
MS 4
DRAFT 4
KI 1
GEE 1
RAJ 1
PJ 1
T 1
RESISTANT.VS.SENSITIVE 1
TAU 1
MUTANT 1
TFEB 1
APP 2
PIO 1
IPSC 1
LACTACYSTIN 1
STAGEDOFAD 1
INCIPIENTAD 1
MODERATEAD 1
SEVEREAD 1
APOE4 1
ENTORHINAL 1
LIMBIC 1
ISOCORTICAL 1
ENTORHINALVSLIMBIC 1
ENTORHINALVSISOCORTICAL 1
LIMBICVSISOCORTICAL 1
TEMPORALCORTEX 1
HIPPOCAMPUS 4
MICROCEBUSMURINUS 1
ADLIKE 2
NFT 2
LACZ 1
CALCINEURIN 2
APPSW 1
APPS 2
AB_SP 7
TR_IL17_HAE 4
OBCONTROLVSINITIALAD 1
CNTRLVSMIDDLEAD 1
CNTRLVSADVANCEDAD 1
GLA 1
TR_IL17_HAEV2 4
CNTRLVSAD 3
LXRAGONIST 2
CEREBRALCORTEX 4
CANNABINOID 2
HTFAM 1
RHTFAM 1
LMWAB40 1
LMWAB42 1
LMWAB40-42 1
XL40 1
XLAB42 1
XLAB40-42 1
FAB40 1
FAB42 1
FAB40-42 1
S40 1
SAB42 1
SAB40-42 1
APPCNTRL 1
WTIBU 1
APPIBU 2
WTIBU-APPIBU 1
T2D AND HYPERGLYCEMIC PANCREATIC ISLETS 1
PSSAPP3M 1
PS2APP7M 1
PS2APP13M 1
PS2APP 1
AD3M 1
AD5-6M 1
AD11-12M 1
WTVSAD 4
FIBROBLASTVSIPSC 1
CTLVSAD 1
CTLVSMCI 1
MCIVSAD 1
FCMALESVSFEMALES 3
MALESNONADVSAD 3
FEMALESNONADVSAD 3
NONADMALESVSFEMALES 2
ADMALESVSFEMALES 2
WTVS5XFAD 2
WTVSTREM2-/- 1
WTVSTREM25FAD 1
5XFADVSTREM2-FAD 2
TREM2-VSTREM2-FAD 1
FCMALES 1
FCFEMALES 1
FCNONADMVSF 1
FCADMVSF 1
HIPMALES 1
HIPFEMALES 1
HIPNONADMVSF 1
HIPADMVSF 1
TCMALES 1
TCFEMALES 1
TCNONADMVSF 1
TCADMVSF 1
ECCNTRLVSAD 1
HIPCNTRLVSAD 1
MTGCNTRLVSAD 1
PC:CNTRLVSAD 1
STG:CNTRLVSAD 1
VC:CNTRLVSAD 2
SHAMVSGFP 2
NONTGGFPVSAPPGF 1
APPGFPVSAPPBDNF 2
NONTGSHAMVSGFP 1
NONTGGFPVSAPPGFP 1
CNTRLVSMCI 1
WTVSKNOCKOUT 1
CNTERLVSAD 1
VEHICLEVSAMI 2
CNTRLVSEOAD 1
CNTRLVSPSEN 1
EOADVSPSEN 1
WTVSPOLB 1
WTVSADPOLB 1
POLBVSADPOLB 1
ADVSADPOLB 1
OVS3 1
OVS6 1
3VS6 1
OVS3N6 1
GFPVSHESGFP 1
NON-TGVSTG 1
CNTRLVSTD 1
WTCNTRLVSWTAE1 1
WTAE1VSADAE1 1
ADCNTRLVSADAE1 1
POSTCENTRUSGYRUSCNTRLVSAD 1
SUPERIORFRONTALGYRUSCNTRL 1
HIPPOCAMPUSWTVSAD 1
ENTORHINALCORTEXWTVSAD 1
WTVSWTEIF2A 1
5XFADVSADEIF2A 1
WTEIF2AVS5XFADEIF2A 1
WTVSADCA1 1
CA3WTVSAD 1
ABETAVSACETREATED 1
WTVSADHEMIZYGOUS 1
WTVSADHOMOZYGOUS 1
APPWTVSAPPDELTAMUT 1
NEONATALWTVSTG 0
BFORPLACEBOVSBEFOREFA 1
AFTERPLACEBOVSAFTERFA 1
TG-VSTG+ 2
TG-VSPDE9TG- 2
TG+VSPDE9TG+ 2
TG-PDE9VSTG+PDE9 2
WTPBSVSAPPPS1PBS 2
APPPS1WTVSAPPPS1CONASO 1
APPPS1CONASOVSAPPPS1CD33ASO 1
FCPBS:WTVSAPPPS1 1
FC:APPPS1:WTVSCON 3
GSE40280 5
TRPV4 1
MUS MUSCULUS 1
ADIPOCYTES 1
THALALLCAN 48
MGCOM 3
MCF-7 1
IL-B 2
MIMIC 2
NONO 7
TLX1/HOX11 11
TLL 11
TRANSGENIC 11
SCID 11
MCF7TEST 1
AUTOPHAGY 3
STARVATION 2
B-LYMPHOBLASTOID 2
CELL CYCLE 1
MCF7_DOX 1
MCF7_ 1
BD2K 1
_LINCS 1
_DCIC 1
_COURSERA 1
MADAD2 1