Name

CMAP Signatures of Differentially Expressed Genes for Small Molecules Dataset

From Connectivity Map

mRNA expression profiles for cell lines following chemical perturbation

GEO Signatures of Differentially Expressed Genes for Small Molecules Dataset

From Gene Expression Omnibus

mRNA expression profiles for cell lines or tissues following small molecule perturbation

LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules Dataset

From LINCS L1000 Connectivity Map

mRNA expression profiles for cell lines following small molecule perturbation

CDH17 Gene

cadherin 17, LI cadherin (liver-intestine)

This gene is a member of the cadherin superfamily, genes encoding calcium-dependent, membrane-associated glycoproteins. The encoded protein is cadherin-like, consisting of an extracellular region, containing 7 cadherin domains, and a transmembrane region but lacking the conserved cytoplasmic domain. The protein is a component of the gastrointestinal tract and pancreatic ducts, acting as an intestinal proton-dependent peptide transporter in the first step in oral absorption of many medically important peptide-based drugs. The protein may also play a role in the morphological organization of liver and intestine. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2009]

ISX Gene

intestine-specific homeobox

Homeobox genes encode DNA-binding proteins, many of which are thought to be involved in early embryonic development. Homeobox genes encode a DNA-binding domain of 60 to 63 amino acids referred to as the homeodomain. This gene is a member of the RAXLX homeobox gene family. [provided by RefSeq, Jul 2008]

RNU5B-1 Gene

RNA, U5B small nuclear 1

SNRPCP6 Gene

small nuclear ribonucleoprotein polypeptide C pseudogene 6

LOC101928952 Gene

serine palmitoyltransferase small subunit A pseudogene

RNU6-67P Gene

RNA, U6 small nuclear 67, pseudogene

RNU7-36P Gene

RNA, U7 small nuclear 36 pseudogene

SNORA81 Gene

small nucleolar RNA, H/ACA box 81

Small nucleolar RNAs (snoRNAs) are small noncoding RNAs involved in RNA processing. Box H/ACA snoRNAs, such as SNORA81, direct the conversion of uridine to pseudouridine at specific residues of ribosomal RNAs or small nuclear RNAs (snRNAs) (Gu et al., 2005).[supplied by OMIM, Mar 2008]

SNORA84 Gene

small nucleolar RNA, H/ACA box 84

SGSM3 Gene

small G protein signaling modulator 3

SNORD115-14 Gene

small nucleolar RNA, C/D box 115-14

SNORD115-16 Gene

small nucleolar RNA, C/D box 115-16

SNORD115-17 Gene

small nucleolar RNA, C/D box 115-17

SNORD115-10 Gene

small nucleolar RNA, C/D box 115-10

RNU1-16P Gene

RNA, U1 small nuclear 16, pseudogene

KRR1 Gene

KRR1, small subunit (SSU) processome component, homolog (yeast)

RNU7-53P Gene

RNA, U7 small nuclear 53 pseudogene

RNU5A-5P Gene

RNA, U5A small nuclear 5, pseudogene

SNORD48 Gene

small nucleolar RNA, C/D box 48

SNORD90 Gene

small nucleolar RNA, C/D box 90

SNORD41 Gene

small nucleolar RNA, C/D box 41

SNORD47 Gene

small nucleolar RNA, C/D box 47

SNORD44 Gene

small nucleolar RNA, C/D box 44

SNORD93 Gene

small nucleolar RNA, C/D box 93

SNORD4B Gene

small nucleolar RNA, C/D box 4B

SNORD4A Gene

small nucleolar RNA, C/D box 4A

LOC100133102 Gene

ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) pseudogene

LOC100422227 Gene

small ubiquitin-like modifier 1 pseudogene

U2AF1L4 Gene

U2 small nuclear RNA auxiliary factor 1-like 4

RNU2-6P Gene

RNA, U2 small nuclear 6, pseudogene

SNORD91B Gene

small nucleolar RNA, C/D box 91B

SNORD91A Gene

small nucleolar RNA, C/D box 91A

LOC402230 Gene

small nuclear ribonucleoprotein 27kDa (U4/U6.U5) pseudogene

SNORD115-6 Gene

small nucleolar RNA, C/D box 115-6

SNORD115-7 Gene

small nucleolar RNA, C/D box 115-7

SNORD115-4 Gene

small nucleolar RNA, C/D box 115-4

SNORD115-1 Gene

small nucleolar RNA, C/D box 115-1

This gene encodes a small nucleolar RNA (snoRNA) that is found clustered with dozens of other similar snoRNAs on chromosome 15. These genes are found mostly within introns of the IC-SNURF-SNRPN transcript, which is paternally imprinted and from the Prader-Willi/Angelman syndrome (PWS) region. This gene has been designated as copy 1 of the cluster and may be involved in the regulation of RNA editing and/or alternative splicing of the serotonin receptor 2C (HTR2C) transcript. This gene is not thought to play a major role in PWS. [provided by RefSeq, Jul 2008]

LOC100131425 Gene

LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) pseudogene

LOC100820733 Gene

LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) pseudogene

RNU7-1 Gene

RNA, U7 small nuclear 1

RNU6-46P Gene

RNA, U6 small nuclear 46, pseudogene

SERF2 Gene

small EDRK-rich factor 2

SNORD45A Gene

small nucleolar RNA, C/D box 45A

LOC101929101 Gene

carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 pseudogene

SNORD111B Gene

small nucleolar RNA, C/D box 111B

LOC100631265 Gene

M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) pseudogene

LOC100631267 Gene

M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) pseudogene

LOC100631266 Gene

M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) pseudogene

LOC100631268 Gene

M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) pseudogene

RNU5E-6P Gene

RNA, U5E small nuclear 6, pseudogene

RNU7-24P Gene

RNA, U7 small nuclear 24 pseudogene

SNRPD3 Gene

small nuclear ribonucleoprotein D3 polypeptide 18kDa

This gene encodes a core component of the spliceosome, which is a nuclear ribonucleoprotein complex that functions in pre-mRNA splicing. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2013]

SNRPD2 Gene

small nuclear ribonucleoprotein D2 polypeptide 16.5kDa

The protein encoded by this gene belongs to the small nuclear ribonucleoprotein core protein family. It is required for pre-mRNA splicing and small nuclear ribonucleoprotein biogenesis. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2009]

SNRPD1 Gene

small nuclear ribonucleoprotein D1 polypeptide 16kDa

This gene encodes a small nuclear ribonucleoprotein that belongs to the SNRNP core protein family. The protein may act as a charged protein scaffold to promote SNRNP assembly or strengthen SNRNP-SNRNP interactions through nonspecific electrostatic contacts with RNA. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2014]

MPHOSPH10 Gene

M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)

This gene encodes a protein that is phosphorylated during mitosis. The protein localizes to the nucleolus during interphase and to the chromosomes during M phase. The protein associates with the U3 small nucleolar ribonucleoprotein 60-80S complexes and may be involved in pre-rRNA processing. [provided by RefSeq, Dec 2010]

LOC100131877 Gene

small EDRK-rich factor 2 pseudogene

RNU1-28P Gene

RNA, U1 small nuclear 28, pseudogene

RNU1-13P Gene

RNA, U1 small nuclear 13, pseudogene

RNU7-5P Gene

RNA, U7 small nuclear 5 pseudogene

SPRR4 Gene

small proline-rich protein 4

SPRR3 Gene

small proline-rich protein 3

RNU6ATAC5P Gene

RNA, U6atac small nuclear 5, pseudogene

LSM8 Gene

LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)

This gene encodes a member of the like-Sm family of proteins. The encoded protein consists of a closed barrel shape, made up of five anti-parallel beta strands and an alpha helix. This protein partners with six paralogs to form a heteroheptameric ring which transiently binds U6 small nuclear RNAs and is involved in the general maturation of RNA in the nucleus. [provided by RefSeq, Jan 2010]

LSM4 Gene

LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)

This gene encodes a member of the LSm family of RNA-binding proteins. LSm proteins form stable heteromers that bind specifically to the 3'-terminal oligo(U) tract of U6 snRNA and may play a role in pre-mRNA splicing by mediating U4/U6 snRNP formation. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Nov 2011]

LSM5 Gene

LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)

Sm-like proteins were identified in a variety of organisms based on sequence homology with the Sm protein family (see SNRPD2; MIM 601061). Sm-like proteins contain the Sm sequence motif, which consists of 2 regions separated by a linker of variable length that folds as a loop. The Sm-like proteins are thought to form a stable heteromer present in tri-snRNP particles, which are important for pre-mRNA splicing.[supplied by OMIM, Apr 2004]

LSM6 Gene

LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)

Sm-like proteins were identified in a variety of organisms based on sequence homology with the Sm protein family (see SNRPD2; MIM 601061). Sm-like proteins contain the Sm sequence motif, which consists of 2 regions separated by a linker of variable length that folds as a loop. The Sm-like proteins are thought to form a stable heteromer present in tri-snRNP particles, which are important for pre-mRNA splicing.[supplied by OMIM, Apr 2004]

SNRPGP9 Gene

small nuclear ribonucleoprotein polypeptide G pseudogene 9

SNRPGP7 Gene

small nuclear ribonucleoprotein polypeptide G pseudogene 7

SNRPGP6 Gene

small nuclear ribonucleoprotein polypeptide G pseudogene 6

SNRPGP5 Gene

small nuclear ribonucleoprotein polypeptide G pseudogene 5

SNRPGP4 Gene

small nuclear ribonucleoprotein polypeptide G pseudogene 4

SNRPGP1 Gene

small nuclear ribonucleoprotein polypeptide G pseudogene 1

LOC100129534 Gene

small nuclear ribonucleoprotein polypeptide N pseudogene

LOC101927923 Gene

small integral membrane protein 12-like

LOC100131747 Gene

small EDRK-rich factor 2 pseudogene

SNORD12C Gene

small nucleolar RNA, C/D box 12C

SNORD12B Gene

small nucleolar RNA, C/D box 12B

SNORD123 Gene

small nucleolar RNA, C/D box 123

SNORD127 Gene

small nucleolar RNA, C/D box 127

SNORD124 Gene

small nucleolar RNA, C/D box 124

RNU7-62P Gene

RNA, U7 small nuclear 62 pseudogene

RNU6-79P Gene

RNA, U6 small nuclear 79, pseudogene

RNU4-7P Gene

RNA, U4 small nuclear 7, pseudogene

RNU6-8 Gene

RNA, U6 small nuclear 8

RNU6-9 Gene

RNA, U6 small nuclear 9

RNU6-7 Gene

RNA, U6 small nuclear 7

RNU6-1 Gene

RNA, U6 small nuclear 1

RNU6-2 Gene

RNA, U6 small nuclear 2

RNU6-69P Gene

RNA, U6 small nuclear 69, pseudogene

SNORA9 Gene

small nucleolar RNA, H/ACA box 9

SNORA8 Gene

small nucleolar RNA, H/ACA box 8

SNORA1 Gene

small nucleolar RNA, H/ACA box 1

SNORA4 Gene

small nucleolar RNA, H/ACA box 4

SNORA6 Gene

small nucleolar RNA, H/ACA box 6

RNU1-20P Gene

RNA, U1 small nuclear 20, pseudogene

LOC100421121 Gene

small G protein signaling modulator 1 pseudogene

RRP9 Gene

ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)

This gene encodes a member of the WD-repeat protein family. The encoded protein is a component of the nucleolar small nuclear ribonucleoprotein particle (snoRNP) and is essential for 18s rRNA processing during ribosome synthesis. It contains seven WD domains required for nucleolar localization and specific interaction with the U3 small nucleolar RNA (U3 snoRNA). [provided by RefSeq, Oct 2012]

SMIM13 Gene

small integral membrane protein 13

SMIM12 Gene

small integral membrane protein 12

SMIM11 Gene

small integral membrane protein 11

SMIM10 Gene

small integral membrane protein 10

SMIM17 Gene

small integral membrane protein 17

SMIM15 Gene

small integral membrane protein 15

SMIM14 Gene

small integral membrane protein 14

SMIM19 Gene

small integral membrane protein 19

SMIM18 Gene

small integral membrane protein 18

RNU7-47P Gene

RNA, U7 small nuclear 47 pseudogene

RNU7-86P Gene

RNA, U7 small nuclear 86 pseudogene

SNORD121B Gene

small nucleolar RNA, C/D box 121B

SNORD121A Gene

small nucleolar RNA, C/D box 121A

RNU7-13P Gene

RNA, U7 small nuclear 13 pseudogene

RNU6-36P Gene

RNA, U6 small nuclear 36, pseudogene

RNU4ATAC2P Gene

RNA, U4atac small nuclear 2, pseudogene

RNU6-64P Gene

RNA, U6 small nuclear 64, pseudogene

SNRNP200 Gene

small nuclear ribonucleoprotein 200kDa (U5)

Pre-mRNA splicing is catalyzed by the spliceosome, a complex of specialized RNA and protein subunits that removes introns from a transcribed pre-mRNA segment. The spliceosome consists of small nuclear RNA proteins (snRNPs) U1, U2, U4, U5 and U6, together with approximately 80 conserved proteins. U5 snRNP contains nine specific proteins. This gene encodes one of the U5 snRNP-specific proteins. This protein belongs to the DEXH-box family of putative RNA helicases. It is a core component of U4/U6-U5 snRNPs and appears to catalyze an ATP-dependent unwinding of U4/U6 RNA duplices. Mutations in this gene cause autosomal-dominant retinitis pigmentosa. Alternatively spliced transcript variants encoding different isoforms have been found, but the full-length nature of these variants has not been determined. [provided by RefSeq, Mar 2010]

RNU5B-5P Gene

RNA, U5B small nuclear 5, pseudogene

RNU6-63P Gene

RNA, U6 small nuclear 63, pseudogene

SNORA74A Gene

small nucleolar RNA, H/ACA box 74A

SNORA74B Gene

small nucleolar RNA, H/ACA box 74B

Small nucleolar RNAs (snoRNAs) are small noncoding RNAs involved in RNA processing. Box H/ACA snoRNAs, such as SNORA74B, direct the conversion of uridine to pseudouridine at specific residues of ribosomal RNAs or small nuclear RNAs (snRNAs) (Gu et al., 2005).[supplied by OMIM, Mar 2008]

RNU7-54P Gene

RNA, U7 small nuclear 54 pseudogene

RNU5A-2P Gene

RNA, U5A small nuclear 2, pseudogene

SNORD115-43 Gene

small nucleolar RNA, C/D box 115-43

SNORD115-41 Gene

small nucleolar RNA, C/D box 115-41

SNORD115-47 Gene

small nucleolar RNA, C/D box 115-47

SNORD1A Gene

small nucleolar RNA, C/D box 1A

SNORD1B Gene

small nucleolar RNA, C/D box 1B

SNORD1C Gene

small nucleolar RNA, C/D box 1C

SNORD16 Gene

small nucleolar RNA, C/D box 16

SNORD10 Gene

small nucleolar RNA, C/D box 10

SNORD11 Gene

small nucleolar RNA, C/D box 11

SNORD19 Gene

small nucleolar RNA, C/D box 19

RNU7-32P Gene

RNA, U7 small nuclear 32 pseudogene

SNORD43 Gene

small nucleolar RNA, C/D box 43

Intronic regions of ribosomal protein genes can harbor noncoding small nucleolar RNAs (snoRNAs), like SNORD43, which are generated during pre-mRNA processing. snoRNAs form part of the small nucleolar ribonucleoprotein particles (snoRNPs) involved in pre-rRNA processing and modification. snoRNAs of the box C/D class, like SNORD43, function in 2-prime-O-ribose methylation of rRNAs (Duga et al., 2000 [PubMed 10684968]).[supplied by OMIM, Mar 2008]

SNORD46 Gene

small nucleolar RNA, C/D box 46

SNORD116-6 Gene

small nucleolar RNA, C/D box 116-6

SNAR-F Gene

small ILF3/NF90-associated RNA F

SNAR-E Gene

small ILF3/NF90-associated RNA E

SNAR-D Gene

small ILF3/NF90-associated RNA D

KCNN4 Gene

potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 4

The protein encoded by this gene is part of a potentially heterotetrameric voltage-independent potassium channel that is activated by intracellular calcium. Activation is followed by membrane hyperpolarization, which promotes calcium influx. The encoded protein may be part of the predominant calcium-activated potassium channel in T-lymphocytes. This gene is similar to other KCNN family potassium channel genes, but it differs enough to possibly be considered as part of a new subfamily. [provided by RefSeq, Jul 2008]

KCNN3 Gene

potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 3

Action potentials in vertebrate neurons are followed by an afterhyperpolarization (AHP) that may persist for several seconds and may have profound consequences for the firing pattern of the neuron. Each component of the AHP is kinetically distinct and is mediated by different calcium-activated potassium channels. This gene belongs to the KCNN family of potassium channels. It encodes an integral membrane protein that forms a voltage-independent calcium-activated channel, which is thought to regulate neuronal excitability by contributing to the slow component of synaptic AHP. This gene contains two CAG repeat regions in the coding sequence. It was thought that expansion of one or both of these repeats could lead to an increased susceptibility to schizophrenia or bipolar disorder, but studies indicate that this is probably not the case. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Feb 2011]

KCNN2 Gene

potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2

Action potentials in vertebrate neurons are followed by an afterhyperpolarization (AHP) that may persist for several seconds and may have profound consequences for the firing pattern of the neuron. Each component of the AHP is kinetically distinct and is mediated by different calcium-activated potassium channels. The protein encoded by this gene is activated before membrane hyperpolarization and is thought to regulate neuronal excitability by contributing to the slow component of synaptic AHP. This gene is a member of the KCNN family of potassium channel genes. The encoded protein is an integral membrane protein that forms a voltage-independent calcium-activated channel with three other calmodulin-binding subunits. Alternate splicing of this gene results in multiple transcript variants. [provided by RefSeq, May 2013]

KCNN1 Gene

potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 1

Action potentials in vertebrate neurons are followed by an afterhyperpolarization (AHP) that may persist for several seconds and may have profound consequences for the firing pattern of the neuron. Each component of the AHP is kinetically distinct and is mediated by different calcium-activated potassium channels. The protein encoded by this gene is activated before membrane hyperpolarization and is thought to regulate neuronal excitability by contributing to the slow component of synaptic AHP. The encoded protein is an integral membrane protein that forms a voltage-independent calcium-activated channel with three other calmodulin-binding subunits. This gene is a member of the KCNN family of potassium channel genes. [provided by RefSeq, Jul 2008]

RNU7-33P Gene

RNA, U7 small nuclear 33 pseudogene

RNU5D-2P Gene

RNA, U5D small nuclear 2, pseudogene

SNORA33 Gene

small nucleolar RNA, H/ACA box 33

SNORA32 Gene

small nucleolar RNA, H/ACA box 32

SNORA31 Gene

small nucleolar RNA, H/ACA box 31

SNORA30 Gene

small nucleolar RNA, H/ACA box 30

SNORA35 Gene

small nucleolar RNA, H/ACA box 35

SNORA34 Gene

small nucleolar RNA, H/ACA box 34

SNORA38 Gene

small nucleolar RNA, H/ACA box 38

RNU6-76P Gene

RNA, U6 small nuclear 76, pseudogene

RNU7-27P Gene

RNA, U7 small nuclear 27 pseudogene

SNRPCP9 Gene

small nuclear ribonucleoprotein polypeptide C pseudogene 9

SNRPCP8 Gene

small nuclear ribonucleoprotein polypeptide C pseudogene 8

SNRPCP3 Gene

small nuclear ribonucleoprotein polypeptide C pseudogene 3

SNRPCP2 Gene

small nuclear ribonucleoprotein polypeptide C pseudogene 2

SNRPCP7 Gene

small nuclear ribonucleoprotein polypeptide C pseudogene 7

SNRPCP4 Gene

small nuclear ribonucleoprotein polypeptide C pseudogene 4

SNAPC3 Gene

small nuclear RNA activating complex, polypeptide 3, 50kDa

SNAPC2 Gene

small nuclear RNA activating complex, polypeptide 2, 45kDa

This gene encodes a subunit of the snRNA-activating protein complex which is associated with the TATA box-binding protein. The encoded protein is necessary for RNA polymerase II and III dependent small-nuclear RNA gene transcription. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2009]

SNAPC1 Gene

small nuclear RNA activating complex, polypeptide 1, 43kDa

SNAPC5 Gene

small nuclear RNA activating complex, polypeptide 5, 19kDa

SNAPC4 Gene

small nuclear RNA activating complex, polypeptide 4, 190kDa

SNORD98 Gene

small nucleolar RNA, C/D box 98

SNORD99 Gene

small nucleolar RNA, C/D box 99

SNORD94 Gene

small nucleolar RNA, C/D box 94

SNORD95 Gene

small nucleolar RNA, C/D box 95

SNORD97 Gene

small nucleolar RNA, C/D box 97

SNORD92 Gene

small nucleolar RNA, C/D box 92

RNU6-21P Gene

RNA, U6 small nuclear 21, pseudogene

UTP14A Gene

UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)

This gene encodes a member of the uridine triphosphate 14 family. As an essential component of a large ribonucleoprotein complex bound to the U3 small nucleolar RNA, the encoded protein is involved in ribosome biogenesis and 18S rRNA synthesis. An autosomal retrotransposed copy of this X-linked gene exists on chromosome 13. Alternative splicing results in multiple transcript variants.[provided by RefSeq, Oct 2009]

UTP14C Gene

UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)

RNU2-3P Gene

RNA, U2 small nuclear 3, pseudogene

RNU7-75P Gene

RNA, U7 small nuclear 75 pseudogene

RNU7-4P Gene

RNA, U7 small nuclear 4 pseudogene

RN7SKP1 Gene

RNA, 7SK small nuclear pseudogene 1

LOC102724525 Gene

carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 pseudogene

RNU5A-8P Gene

RNA, U5A small nuclear 8, pseudogene

RNU6-53P Gene

RNA, U6 small nuclear 53, pseudogene

RNU6-39P Gene

RNA, U6 small nuclear 39, pseudogene

RNU5F-6P Gene

RNA, U5F small nuclear 6, pseudogene

SNAR-A8 Gene

small ILF3/NF90-associated RNA A8

RNU4-4P Gene

RNA, U4 small nuclear 4, pseudogene

SNAR-G1 Gene

small ILF3/NF90-associated RNA G1

SNAR-G2 Gene

small ILF3/NF90-associated RNA G2

RNU6-83P Gene

RNA, U6 small nuclear 83, pseudogene

RNU1-27P Gene

RNA, U1 small nuclear 27, pseudogene

RNU6-48P Gene

RNA, U6 small nuclear 48, pseudogene

RNU1-18P Gene

RNA, U1 small nuclear 18, pseudogene

SMIM23 Gene

small integral membrane protein 23

SMIM20 Gene

small integral membrane protein 20

SMIM21 Gene

small integral membrane protein 21

SMIM24 Gene

small integral membrane protein 24

RNU2-1 Gene

RNA, U2 small nuclear 1

The spliceosome is a multicomponent ribonucleoprotein complex that catalyzes the removal of introns from nuclear mRNA precursors. The spliceosome is composed of four small ribonucleoprotein particles (the U1, U2, and U4/U6 snRNPs) and numerous additional proteins. The U2 small nuclear RNA (snRNA) is a RNA component of the U2 snRNP that interacts with the 3' region of the intron at the branch site. Several sites in the human genome express U2 snRNAs. This locus represents an array of U2 snRNA genes located at 17q21-22 that undergoes concerted evolution to homogenize repeat units within the array. Each repeat in this array is approximately 6.1 kb long and contains a single copy of the U2 snRNA. Arrays of six to more than 30 repeats have been reported. [provided by RefSeq, Mar 2009]

RNU7-42P Gene

RNA, U7 small nuclear 42 pseudogene

SNORD32A Gene

small nucleolar RNA, C/D box 32A

SNORD32B Gene

small nucleolar RNA, C/D box 32B

RNU7-85P Gene

RNA, U7 small nuclear 85 pseudogene

SCLC1 Gene

small cell cancer of the lung

SNORD17 Gene

small nucleolar RNA, C/D box 17

SNHG5 Gene

small nucleolar RNA host gene 5

This gene is a member of both the non-protein-coding multiple snoRNA host gene family and the 5'-terminal oligopyrimidine (5' TOP) class of genes. Two snoRNAs are derived from the introns of this host gene but, although many alternative splice variants have been observed, the gene is thought to have no protein-coding potential. The gene is located at the chromosomal translocation breakpoint involved in B-cell lymphoma. [provided by RefSeq, Jul 2008]

SNHG4 Gene

small nucleolar RNA host gene 4

SNHG7 Gene

small nucleolar RNA host gene 7

SNHG6 Gene

small nucleolar RNA host gene 6

SNHG1 Gene

small nucleolar RNA host gene 1

SNHG8 Gene

small nucleolar RNA host gene 8

RNU7-28P Gene

RNA, U7 small nuclear 28 pseudogene

RNU7-65P Gene

RNA, U7 small nuclear 65 pseudogene

RNU7-38P Gene

RNA, U7 small nuclear 38 pseudogene

SNORD15B Gene

small nucleolar RNA, C/D box 15B

SNORD15A Gene

small nucleolar RNA, C/D box 15A

SNORD3B-1 Gene

small nucleolar RNA, C/D box 3B-1

SNORD3B-2 Gene

small nucleolar RNA, C/D box 3B-2

LOC100421673 Gene

small nuclear ribonucleoprotein polypeptide B pseudogene

LOC100421672 Gene

small nuclear ribonucleoprotein polypeptide B pseudogene

LOC101929749 Gene

carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 pseudogene

TSKU Gene

tsukushi, small leucine rich proteoglycan

LOC643802 Gene

u3 small nucleolar ribonucleoprotein protein MPP10-like

SNORD83A Gene

small nucleolar RNA, C/D box 83A

Intronic regions of ribosomal protein genes can harbor noncoding small nucleolar RNAs (snoRNAs), like SNORD83A, which are generated during pre-mRNA processing. snoRNAs form part of the small nucleolar ribonucleoprotein particles (snoRNPs) involved in pre-rRNA processing and modification. snoRNAs of the box C/D class, like SNORD83A, function in 2-prime-O-ribose methylation of rRNAs (Duga et al., 2000 [PubMed 10684968]).[supplied by OMIM, Mar 2008]

SNORD83B Gene

small nucleolar RNA, C/D box 83B

Intronic regions of ribosomal protein genes can harbor noncoding small nucleolar RNAs (snoRNAs), like SNORD83B, which are generated during pre-mRNA processing. snoRNAs form part of the small nucleolar ribonucleoprotein particles (snoRNPs) involved in pre-rRNA processing and modification. snoRNAs of the box C/D class, like SNORD83B, function in 2-prime-O-ribose methylation of rRNAs (Duga et al., 2000 [PubMed 10684968]).[supplied by OMIM, Mar 2008]

SNORA71C Gene

small nucleolar RNA, H/ACA box 71C

SNORA71B Gene

small nucleolar RNA, H/ACA box 71B

SNORA71A Gene

small nucleolar RNA, H/ACA box 71A

SNORA71E Gene

small nucleolar RNA, H/ACA box 71E

RNU6-66P Gene

RNA, U6 small nuclear 66, pseudogene

SNORD85 Gene

small nucleolar RNA, C/D box 85

UTP3 Gene

UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)

RNU7-8P Gene

RNA, U7 small nuclear 8 pseudogene

SNORD114-31 Gene

small nucleolar RNA, C/D box 114-31

SNORD114-30 Gene

small nucleolar RNA, C/D box 114-30

SMKR1 Gene

small lysine-rich protein 1

LOC100820734 Gene

LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) pseudogene

RNU7-14P Gene

RNA, U7 small nuclear 14 pseudogene

LOC729200 Gene

small nuclear ribonucleoprotein polypeptide B pseudogene

RNVU1-17 Gene

RNA, variant U1 small nuclear 17

RNVU1-14 Gene

RNA, variant U1 small nuclear 14

RNVU1-15 Gene

RNA, variant U1 small nuclear 15

RNVU1-11 Gene

RNA, variant U1 small nuclear 11

RNVU1-18 Gene

RNA, variant U1 small nuclear 18

RNVU1-19 Gene

RNA, variant U1 small nuclear 19

SNORD12 Gene

small nucleolar RNA, C/D box 12

RNU7-30P Gene

RNA, U7 small nuclear 30 pseudogene

SNORD13 Gene

small nucleolar RNA, C/D box 13

SMIM11P1 Gene

small integral membrane protein 11 pseudogene 1

SNORA68 Gene

small nucleolar RNA, H/ACA box 68

SNORA64 Gene

small nucleolar RNA, H/ACA box 64

SNORA65 Gene

small nucleolar RNA, H/ACA box 65

SNORA66 Gene

small nucleolar RNA, H/ACA box 66

This gene encodes a non-coding RNA that functions in the biogenesis of other small nuclear RNAs. This RNA is found in the nucleolus, where it may be involved in the pseudouridylation of 18S ribosomal RNA. This RNA is found associated with the GAR1 protein. [provided by RefSeq, Apr 2009]

SNORA67 Gene

small nucleolar RNA, H/ACA box 67

SNORA60 Gene

small nucleolar RNA, H/ACA box 60

SNORA61 Gene

small nucleolar RNA, H/ACA box 61

SNORA62 Gene

small nucleolar RNA, H/ACA box 62

SNORA63 Gene

small nucleolar RNA, H/ACA box 63

SNORD116@ Gene

small nucleolar RNA, C/D box 116 cluster

SNAPC5P1 Gene

small nuclear RNA activating complex, polypeptide 5, 19kDa pseudogene 1

SNRPGP13 Gene

small nuclear ribonucleoprotein polypeptide G pseudogene 13

SNRPGP12 Gene

small nuclear ribonucleoprotein polypeptide G pseudogene 12

SNRPGP11 Gene

small nuclear ribonucleoprotein polypeptide G pseudogene 11

SNRPGP14 Gene

small nuclear ribonucleoprotein polypeptide G pseudogene 14

SNORD116-25 Gene

small nucleolar RNA, C/D box 116-25

SNORD116-27 Gene

small nucleolar RNA, C/D box 116-27

SNORD116-21 Gene

small nucleolar RNA, C/D box 116-21

RNU5E-8P Gene

RNA, U5E small nuclear 8, pseudogene

RNU7-51P Gene

RNA, U7 small nuclear 51 pseudogene

SNORD65 Gene

small nucleolar RNA, C/D box 65

SNORD64 Gene

small nucleolar RNA, C/D box 64

This gene encodes a C/D box-type small nucleolar RNA that is expressed predominantly in the brain. Expression of this RNA is not detectable in the brains of patients with Prader-Willi syndrome. [provided by RefSeq, Jun 2010]

SNORD67 Gene

small nucleolar RNA, C/D box 67

SNORD66 Gene

small nucleolar RNA, C/D box 66

SNORD61 Gene

small nucleolar RNA, C/D box 61

Small nucleolar RNAs (snoRNAs) are small noncoding RNAs involved in RNA processing. Box C/D class snoRNAs are involved in site-specific 2-prime-O-ribose methylation of preribosomal RNA precursors. This snoRNA is located in an intron of the RNA binding motif protein, X-linked gene (RBMX). [provided by RefSeq, Sep 2009]

SNORD60 Gene

small nucleolar RNA, C/D box 60

SNORD63 Gene

small nucleolar RNA, C/D box 63

SNORD69 Gene

small nucleolar RNA, C/D box 69

SNORD68 Gene

small nucleolar RNA, C/D box 68

RNU6-15P Gene

RNA, U6 small nuclear 15, pseudogene

RNU2-4P Gene

RNA, U2 small nuclear 4, pseudogene

RNU1-15P Gene

RNA, U1 small nuclear 15, pseudogene

RNU5F-4P Gene

RNA, U5F small nuclear 4, pseudogene

RNU6ATAC3P Gene

RNA, U6atac small nuclear 3, pseudogene

SVIP Gene

small VCP/p97-interacting protein

SMIM22 Gene

small integral membrane protein 22

RNU7-72P Gene

RNA, U7 small nuclear 72 pseudogene

RNU6-56P Gene

RNA, U6 small nuclear 56, pseudogene

SNORD114-20 Gene

small nucleolar RNA, C/D box 114-20

SNRPGP8 Gene

small nuclear ribonucleoprotein polypeptide G pseudogene 8

SNORD115-21 Gene

small nucleolar RNA, C/D box 115-21

SNORD115-20 Gene

small nucleolar RNA, C/D box 115-20

SNORD115-23 Gene

small nucleolar RNA, C/D box 115-23

SNORD115-22 Gene

small nucleolar RNA, C/D box 115-22

SNORD115-25 Gene

small nucleolar RNA, C/D box 115-25

SNORD115-24 Gene

small nucleolar RNA, C/D box 115-24

SNORD115-27 Gene

small nucleolar RNA, C/D box 115-27

SNORD115-26 Gene

small nucleolar RNA, C/D box 115-26

SNORD115-29 Gene

small nucleolar RNA, C/D box 115-29

SNORD115-28 Gene

small nucleolar RNA, C/D box 115-28

LOC100131448 Gene

CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 pseudogene

RNU3P2 Gene

RNA, U3 small nucleolar pseudogene 2

RNU3P3 Gene

RNA, U3 small nucleolar pseudogene 3

RNU3P1 Gene

RNA, U3 small nucleolar pseudogene 1

RNU3P4 Gene

RNA, U3 small nucleolar pseudogene 4

SNHG15 Gene

small nucleolar RNA host gene 15

SNHG14 Gene

small nucleolar RNA host gene 14

SNHG17 Gene

small nucleolar RNA host gene 17

SNHG16 Gene

small nucleolar RNA host gene 16

SNHG11 Gene

small nucleolar RNA host gene 11

This gene is a member of the non-protein-coding multiple snoRNA host gene family. Two snoRNAs are derived from the introns of this host gene. Although many alternative splice variants have been observed, the gene is thought to have no protein-coding potential. [provided by RefSeq, Jul 2008]

SNHG12 Gene

small nucleolar RNA host gene 12

SNHG19 Gene

small nucleolar RNA host gene 19

SNHG18 Gene

small nucleolar RNA host gene 18

SNORA80E Gene

small nucleolar RNA, H/ACA box 80E

SNORA80B Gene

small nucleolar RNA, H/ACA box 80B

SNORA80A Gene

small nucleolar RNA, H/ACA box 80A

RNU4-9P Gene

RNA, U4 small nuclear 9, pseudogene

RNU6-71P Gene

RNA, U6 small nuclear 71, pseudogene

SNORA45A Gene

small nucleolar RNA, H/ACA box 45A

RNU7-22P Gene

RNA, U7 small nuclear 22 pseudogene

SNRPB2 Gene

small nuclear ribonucleoprotein polypeptide B

The protein encoded by this gene associates with stem loop IV of U2 small nuclear ribonucleoprotein (U2 snRNP) in the presence of snRNP-A'. The encoded protein may play a role in pre-mRNA splicing. Autoantibodies from patients with systemic lupus erythematosus frequently recognize epitopes on the encoded protein. Two transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008]

ASH2LP1 Gene

ash2 (absent, small, or homeotic)-like (Drosophila) pseudogene 1

RNU7-59P Gene

RNA, U7 small nuclear 59 pseudogene

SNORD88A Gene

small nucleolar RNA, C/D box 88A

SNORD88B Gene

small nucleolar RNA, C/D box 88B

SNORD88C Gene

small nucleolar RNA, C/D box 88C

RNU6-26P Gene

RNA, U6 small nuclear 26, pseudogene

UTP11L Gene

UTP11-like, U3 small nucleolar ribonucleoprotein (yeast)

RNU6-10P Gene

RNA, U6 small nuclear 10, pseudogene

SNORD114-1 Gene

small nucleolar RNA, C/D box 114-1

Small nucleolar RNAs (snoRNAs), like SNORD114-1, guide the formation of 2-prime O-methylation of ribosomal RNA (rRNA) and U small nuclear RNAs (snRNAs) through a specific RNA duplex at each modification site. SNORD114-1 is 1 of 31 tandem SNORD114 genes on chromosome 14q32 (Cavaille et al., 2002 [PubMed 12045206]).[supplied by OMIM, Nov 2010]

SNORD114-6 Gene

small nucleolar RNA, C/D box 114-6

SNORD114-5 Gene

small nucleolar RNA, C/D box 114-5

SNORD114-4 Gene

small nucleolar RNA, C/D box 114-4

ASH1L Gene

ash1 (absent, small, or homeotic)-like (Drosophila)

This gene encodes a member of the trithorax group of transcriptional activators. The protein contains four AT hooks, a SET domain, a PHD-finger motif, and a bromodomain. It is localized to many small speckles in the nucleus, and also to cell-cell tight junctions. [provided by RefSeq, Jul 2008]

LOC100422490 Gene

UTP6, small subunit (SSU) processome component, homolog (yeast) pseudogene

LOC100422497 Gene

UTP18, small subunit (SSU) processome component, homolog (yeast) pseudogene

RNU7-41P Gene

RNA, U7 small nuclear 41 pseudogene

SCARNA27 Gene

small Cajal body-specific RNA 27

SCARNA22 Gene

small Cajal body-specific RNA 22

SCARNA23 Gene

small Cajal body-specific RNA 23

SCARNA20 Gene

small Cajal body-specific RNA 20

SCARNA21 Gene

small Cajal body-specific RNA 21

RNU6ATAC4P Gene

RNA, U6atac small nuclear 4, pseudogene

RNU1-3 Gene

RNA, U1 small nuclear 3

RNU1-2 Gene

RNA, U1 small nuclear 2

RNU6-31P Gene

RNA, U6 small nuclear 31, pseudogene

SNORD115-5 Gene

small nucleolar RNA, C/D box 115-5

SNORD115-2 Gene

small nucleolar RNA, C/D box 115-2

SNORD115-3 Gene

small nucleolar RNA, C/D box 115-3

SNORD115-8 Gene

small nucleolar RNA, C/D box 115-8

SNORD115-9 Gene

small nucleolar RNA, C/D box 115-9

SNORD101 Gene

small nucleolar RNA, C/D box 101

SNORD100 Gene

small nucleolar RNA, C/D box 100

SNORD102 Gene

small nucleolar RNA, C/D box 102

SNORD105 Gene

small nucleolar RNA, C/D box 105

SNORD104 Gene

small nucleolar RNA, C/D box 104

SNORD107 Gene

small nucleolar RNA, C/D box 107

Small nucleolar RNAs (snoRNAs) are small non-coding RNAs involved in RNA processing. Box C/D class snoRNAs are involved in site-specific 2-prime-O-ribose methylation of preribosomal RNA precursors. This snoRNA is located in a cluster of genes including the SNURF-SNRPN gene, which serves as a host for multiple snoRNAs. [provided by RefSeq, Oct 2011]

SNORD108 Gene

small nucleolar RNA, C/D box 108

RNU7-60P Gene

RNA, U7 small nuclear 60 pseudogene

LOC441722 Gene

U2 small nuclear RNA auxiliary factor 1-like 4 pseudogene

SNORD23 Gene

small nucleolar RNA, C/D box 23

SNAR-B2 Gene

small ILF3/NF90-associated RNA B2

SNAR-B1 Gene

small ILF3/NF90-associated RNA B1

RNU5B-3P Gene

RNA, U5B small nuclear 3, pseudogene

LOC100631374 Gene

M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) pseudogene

SNRNP40 Gene

small nuclear ribonucleoprotein 40kDa (U5)

This gene encodes a component of the U5 small nuclear ribonucleoprotein (snRNP) particle. The U5 snRNP is part of the spliceosome, a multiprotein complex that catalyzes the removal of introns from pre-messenger RNAs. [provided by RefSeq, Jul 2008]

SNRNP48 Gene

small nuclear ribonucleoprotein 48kDa (U11/U12)

CDC42SE2 Gene

CDC42 small effector 2

CDC42SE1 Gene

CDC42 small effector 1

RNU1-22P Gene

RNA, U1 small nuclear 22, pseudogene

SCARNA5 Gene

small Cajal body-specific RNA 5

SCARNA4 Gene

small Cajal body-specific RNA 4

SMAGP Gene

small cell adhesion glycoprotein

RN7SKP8 Gene

RNA, 7SK small nuclear pseudogene 8

RN7SKP9 Gene

RNA, 7SK small nuclear pseudogene 9

RN7SKP6 Gene

RNA, 7SK small nuclear pseudogene 6

RN7SKP7 Gene

RNA, 7SK small nuclear pseudogene 7

RN7SKP4 Gene

RNA, 7SK small nuclear pseudogene 4

RN7SKP5 Gene

RNA, 7SK small nuclear pseudogene 5

RN7SKP2 Gene

RNA, 7SK small nuclear pseudogene 2

RN7SKP3 Gene

RNA, 7SK small nuclear pseudogene 3

SCARNA2 Gene

small Cajal body-specific RNA 2

SNHG3 Gene

small nucleolar RNA host gene 3

SMIM2 Gene

small integral membrane protein 2

SMIM1 Gene

small integral membrane protein 1 (Vel blood group)

This gene encodes a small, conserved protein that participates in red blood cell formation. The encoded protein is localized to the cell membrane and is the antigen for the Vel blood group. Alternative splicing results in different transcript variants that encode the same protein. [provided by RefSeq, Dec 2013]

SNHG9 Gene

small nucleolar RNA host gene 9

RNU7-80P Gene

RNA, U7 small nuclear 80 pseudogene

RNU7-11P Gene

RNA, U7 small nuclear 11 pseudogene

LOC643605 Gene

CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 pseudogene

RNU7-35P Gene

RNA, U7 small nuclear 35 pseudogene

SNORD45C Gene

small nucleolar RNA, C/D box 45C

SNORD45B Gene

small nucleolar RNA, C/D box 45B

RNU7-68P Gene

RNA, U7 small nuclear 68 pseudogene

SNORD18A Gene

small nucleolar RNA, C/D box 18A

SNORD18C Gene

small nucleolar RNA, C/D box 18C

SNORD18B Gene

small nucleolar RNA, C/D box 18B

SNORA53 Gene

small nucleolar RNA, H/ACA box 53

SMIM10L1 Gene

small integral membrane protein 10 like 1

SNORA76C Gene

small nucleolar RNA, H/ACA box 76C

SNORA76A Gene

small nucleolar RNA, H/ACA box 76A

RNU7-52P Gene

RNA, U7 small nuclear 52 pseudogene

RNU5A-4P Gene

RNA, U5A small nuclear 4, pseudogene

SNORD3D Gene

small nucleolar RNA, C/D box 3D

SNORD3@ Gene

small nucleolar RNA, C/D box 3 cluster

SNORD3A Gene

small nucleolar RNA, C/D box 3A

U3 RNA, an abundant small nucleolar RNA (snoRNA), is thought to play a role in the processing of ribosomal RNA precursors (Bernstein et al., 1983 [PubMed 6186397]).[supplied by OMIM, Jun 2009]

SNORD37 Gene

small nucleolar RNA, C/D box 37

SNORD34 Gene

small nucleolar RNA, C/D box 34

SNORD33 Gene

small nucleolar RNA, C/D box 33

SNORD30 Gene

small nucleolar RNA, C/D box 30

SNORD31 Gene

small nucleolar RNA, C/D box 31

RNU6-45P Gene

RNA, U6 small nuclear 45, pseudogene

RNU6-34P Gene

RNA, U6 small nuclear 34, pseudogene

LSM1P1 Gene

LSM1, U6 small nuclear RNA associated pseudogene 1

LOC102724677 Gene

carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 pseudogene

RNU6-55P Gene

RNA, U6 small nuclear 55, pseudogene

SNORA19 Gene

small nucleolar RNA, H/ACA box 19

SNORA18 Gene

small nucleolar RNA, H/ACA box 18

SNORA15 Gene

small nucleolar RNA, H/ACA box 15

SNORA17 Gene

small nucleolar RNA, H/ACA box 17

SNORA12 Gene

small nucleolar RNA, H/ACA box 12

Small nucleolar RNAs (snoRNAs) are small noncoding RNAs involved in RNA processing. Box H/ACA snoRNAs, such as SNORA12, direct the conversion of uridine to pseudouridine at specific residues of ribosomal RNAs or small nuclear RNAs (snRNAs) (Gu et al., 2005).[supplied by OMIM, Mar 2008]

RNU5F-7P Gene

RNA, U5F small nuclear 7, pseudogene

RNU7-19P Gene

RNA, U7 small nuclear 19 pseudogene

RNU7-78P Gene

RNA, U7 small nuclear 78 pseudogene

RNU4ATAC Gene

RNA, U4atac small nuclear (U12-dependent splicing)

The small nuclear RNA (snRNA) encoded by this gene is part of the U12-dependent minor spliceosome complex. In addition to the encoded RNA, this ribonucleoprotein complex consists of U11, U12, U5, and U6atac snRNAs. The U12-dependent spliceosome acts on approximately 700 specific introns in the human genome. Defects in this gene are a cause of microcephalic osteodysplastic primordial dwarfism type 1 (MOPD). [provided by RefSeq, Jul 2011]

RNU7-25P Gene

RNA, U7 small nuclear 25 pseudogene

RNU7-81P Gene

RNA, U7 small nuclear 81 pseudogene

SNAR-C3 Gene

small ILF3/NF90-associated RNA C3

RNU6-23P Gene

RNA, U6 small nuclear 23, pseudogene

RNU7-10P Gene

RNA, U7 small nuclear 10 pseudogene

CTDSP1 Gene

CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1

This gene encodes a member of the small C-terminal domain phosphatase (SCP) family of nuclear phosphatases. These proteins play a role in transcriptional regulation through specific dephosphorylation of phosphoserine 5 within tandem heptapeptide repeats of the C-terminal domain of RNA polymerase II. The encoded protein plays a role in neuronal gene silencing in non-neuronal cells, and may also inhibit osteoblast differentiation. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Oct 2011]

CTDSP2 Gene

CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2

CTDSPL Gene

CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like

RNU7-20P Gene

RNA, U7 small nuclear 20 pseudogene

SNORD116-10 Gene

small nucleolar RNA, C/D box 116-10

SNORD116-12 Gene

small nucleolar RNA, C/D box 116-12

RNU7-6P Gene

RNA, U7 small nuclear 6 pseudogene

RNU7-77P Gene

RNA, U7 small nuclear 77 pseudogene

RN7SK Gene

RNA, 7SK small nuclear

UTP18 Gene

UTP18 small subunit (SSU) processome component homolog (yeast)

SNORA36A Gene

small nucleolar RNA, H/ACA box 36A

Biosynthesis of stable cellular RNAs such as tRNAs, rRNAs, snRNAs, and snoRNAs is aided by covalent nucleotide modification after transcription. The modified nucleotides are involved in correct RNA folding, establishment of correct RNA-RNA and RNA-protein interactions, and in the correct function of mature RNAs. The RNA encoded by this gene is thought to mediate the pseudouridylation of residues U105 and U1244 of 18S rRNA. [provided by RefSeq, Feb 2009]

SNAR-A14 Gene

small ILF3/NF90-associated RNA A14

SNAR-A11 Gene

small ILF3/NF90-associated RNA A11

SNAR-A10 Gene

small ILF3/NF90-associated RNA A10

SNORD3C Gene

small nucleolar RNA, C/D box 3C

SNORD105B Gene

small nucleolar RNA, C/D box 105B

RNU5D-1 Gene

RNA, U5D small nuclear 1

RNU4-6P Gene

RNA, U4 small nuclear 6, pseudogene

SNORA71D Gene

small nucleolar RNA, H/ACA box 71D

LOC100303749 Gene

LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) pseudogene

SNAR-A3 Gene

small ILF3/NF90-associated RNA A3

SNAR-A2 Gene

small ILF3/NF90-associated RNA A2

SNAR-A7 Gene

small ILF3/NF90-associated RNA A7

SNAR-A6 Gene

small ILF3/NF90-associated RNA A6

SNAR-A5 Gene

small ILF3/NF90-associated RNA A5

SNAR-A4 Gene

small ILF3/NF90-associated RNA A4

SNORA16A Gene

small nucleolar RNA, H/ACA box 16A

CMSS1 Gene

cms1 ribosomal small subunit homolog (yeast)

SNRNP70 Gene

small nuclear ribonucleoprotein 70kDa (U1)

RNU7-49P Gene

RNA, U7 small nuclear 49 pseudogene

RNU5E-1 Gene

RNA, U5E small nuclear 1

SNORD70 Gene

small nucleolar RNA, C/D box 70

RNU1-21P Gene

RNA, U1 small nuclear 21, pseudogene

LOC100421863 Gene

ash2 (absent, small, or homeotic)-like (Drosophila) pseudogene

RNU7-44P Gene

RNA, U7 small nuclear 44 pseudogene

SNORD116-5 Gene

small nucleolar RNA, C/D box 116-5

SNORD116-7 Gene

small nucleolar RNA, C/D box 116-7

RNU7-87P Gene

RNA, U7 small nuclear 87 pseudogene

RNU7-12P Gene

RNA, U7 small nuclear 12 pseudogene

RNU6ATAC Gene

RNA, U6atac small nuclear (U12-dependent splicing)

SNORD62B Gene

small nucleolar RNA, C/D box 62B

SMIM12P1 Gene

small integral membrane protein 12 pseudogene 1

SPTSSA Gene

serine palmitoyltransferase, small subunit A

Serine palmitoyltransferase (SPT; EC 2.3.1.50) catalyzes the first committed and rate-limiting step in sphingolipid biosynthesis. SSSPTA is a small SPT subunit that stimulates SPT activity and confers acyl-CoA preference to the SPT catalytic heterodimer of SPTLC1 (MIM 605712) and either SPTLC2 (MIM 605713) or SPTLC3 (MIM 611120) (Han et al., 2009 [PubMed 19416851]).[supplied by OMIM, Nov 2010]

SPTSSB Gene

serine palmitoyltransferase, small subunit B

Serine palmitoyltransferase (SPT; EC 2.3.1.50) catalyzes the first committed and rate-limiting step in sphingolipid biosynthesis. SSSPTB is a small SPT subunit that stimulates SPT activity and confers acyl-CoA preference to the SPT catalytic heterodimer of SPTLC1 (MIM 605712) and either SPTLC2 (MIM 605713) or SPTLC3 (MIM 611120) (Han et al., 2009 [PubMed 19416851]).[supplied by OMIM, Nov 2010]

SNORA11 Gene

small nucleolar RNA, H/ACA box 11

Small nucleolar RNAs (snoRNAs) are small noncoding RNAs involved in RNA processing. Box H/ACA snoRNAs, such as SNORA11, direct the conversion of uridine to pseudouridine at specific residues of ribosomal RNAs or small nuclear RNAs (snRNAs) (Gu et al., 2005).[supplied by OMIM, Mar 2008]

SNORA10 Gene

small nucleolar RNA, H/ACA box 10

SNORA13 Gene

small nucleolar RNA, H/ACA box 13

LOC102724822 Gene

carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 pseudogene

UTP6 Gene

UTP6, small subunit (SSU) processome component, homolog (yeast)

SNORD126 Gene

small nucleolar RNA, C/D box 126

SNORD125 Gene

small nucleolar RNA, C/D box 125

LOC105377886 Gene

small EDRK-rich factor 2 pseudogene

RSG1 Gene

REM2 and RAB-like small GTPase 1

RNU5B-6P Gene

RNA, U5B small nuclear 6, pseudogene

SNORA73A Gene

small nucleolar RNA, H/ACA box 73A

SNORA73B Gene

small nucleolar RNA, H/ACA box 73B

RNU7-57P Gene

RNA, U7 small nuclear 57 pseudogene

RNU6-52P Gene

RNA, U6 small nuclear 52, pseudogene

RAC2 Gene

ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)

This gene encodes a member of the Ras superfamily of small guanosine triphosphate (GTP)-metabolizing proteins. The encoded protein localizes to the plasma membrane, where it regulates diverse processes, such as secretion, phagocytosis, and cell polarization. Activity of this protein is also involved in the generation of reactive oxygen species. Mutations in this gene are associated with neutrophil immunodeficiency syndrome. There is a pseudogene for this gene on chromosome 6. [provided by RefSeq, Jul 2013]

RAC3 Gene

ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)

The protein encoded by this gene is a GTPase which belongs to the RAS superfamily of small GTP-binding proteins. Members of this superfamily appear to regulate a diverse array of cellular events, including the control of cell growth, cytoskeletal reorganization, and the activation of protein kinases. [provided by RefSeq, Jul 2008]

RAC1 Gene

ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)

The protein encoded by this gene is a GTPase which belongs to the RAS superfamily of small GTP-binding proteins. Members of this superfamily appear to regulate a diverse array of cellular events, including the control of cell growth, cytoskeletal reorganization, and the activation of protein kinases. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2009]

SNAR-A12 Gene

small ILF3/NF90-associated RNA A12

RNU7-88P Gene

RNA, U7 small nuclear 88 pseudogene

RN7SKP10 Gene

RNA, 7SK small nuclear pseudogene 10

BA395L14.12 Gene

small nuclear ribonucleoprotein polypeptide A' pseudogene

RNU6-58P Gene

RNA, U6 small nuclear 58, pseudogene

RNU5E-9P Gene

RNA, U5E small nuclear 9, pseudogene

SNORD113-1 Gene

small nucleolar RNA, C/D box 113-1

Small nucleolar RNAs (snoRNAs), like SNORD113-1, guide the formation of 2-prime O-methylation of ribosomal RNA (rRNA) and U small nuclear RNAs (snRNAs) through a specific RNA duplex at each modification site. SNORD113-1 is 1 of 9 tandem SNORD113 genes on chromosome 14q32 (Cavaille et al., 2002 [PubMed 12045206]).[supplied by OMIM, Nov 2010]

SNORD113-3 Gene

small nucleolar RNA, C/D box 113-3

SNORD115-42 Gene

small nucleolar RNA, C/D box 115-42

SNORD115-40 Gene

small nucleolar RNA, C/D box 115-40

SNORD115-46 Gene

small nucleolar RNA, C/D box 115-46

SNORD115-45 Gene

small nucleolar RNA, C/D box 115-45

SNORD115-44 Gene

small nucleolar RNA, C/D box 115-44

SNORD115-48 Gene

small nucleolar RNA, C/D box 115-48

SNORD42B Gene

small nucleolar RNA, C/D box 42B

SNORD42A Gene

small nucleolar RNA, C/D box 42A

SNORA46 Gene

small nucleolar RNA, H/ACA box 46

SNORA47 Gene

small nucleolar RNA, H/ACA box 47

SNORA44 Gene

small nucleolar RNA, H/ACA box 44

SNORA43 Gene

small nucleolar RNA, H/ACA box 43

SNORA40 Gene

small nucleolar RNA, H/ACA box 40

SNORA41 Gene

small nucleolar RNA, H/ACA box 41

SNORA48 Gene

small nucleolar RNA, H/ACA box 48

SNORA49 Gene

small nucleolar RNA, H/ACA box 49

SNORD114@ Gene

small nucleolar RNA, C/D box 114 cluster

RNU7-73P Gene

RNA, U7 small nuclear 73 pseudogene

RNU6V Gene

RNA, U6 small nuclear variant sequence with SNRPE pseudogene sequence

SNORD58A Gene

small nucleolar RNA, C/D box 58A

SNORD58C Gene

small nucleolar RNA, C/D box 58C

SNORD58B Gene

small nucleolar RNA, C/D box 58B

SNORD89 Gene

small nucleolar RNA, C/D box 89

SNORD87 Gene

small nucleolar RNA, C/D box 87

Small nucleolar RNAs (snoRNAs) of the C/D class, such as SNORD87, are involved in 2-prime-methylation of preribosomal RNA precursors (Gogolevskaya et al., 2002 [PubMed 12119114]).[supplied by OMIM, Aug 2008]

SNORD86 Gene

small nucleolar RNA, C/D box 86

SNORD84 Gene

small nucleolar RNA, C/D box 84

SNORD82 Gene

small nucleolar RNA, C/D box 82

The majority of small nucleolar RNAs (snoRNAs) function as guide RNAs in the nucleotide modification of preribosomal RNA (pre-rRNA). C/D box snoRNAs, like SNORD82, are involved in site-specific 2-prime-O-ribose methylation of pre-rRNA (Rebane and Metspalu, 1999 [PubMed 10524220]).[supplied by OMIM, Mar 2008]

SNORD81 Gene

small nucleolar RNA, C/D box 81

SNORD80 Gene

small nucleolar RNA, C/D box 80

RNU5E-5P Gene

RNA, U5E small nuclear 5, pseudogene

SGTB Gene

small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta

SGTA Gene

small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha

This gene encodes a protein which is capable of interacting with the major nonstructural protein of parvovirus H-1 and 70-kDa heat shock cognate protein; however, its function is not known. Since this transcript is expressed ubiquitously in various tissues, this protein may serve a housekeeping function. [provided by RefSeq, Jul 2008]

SNRPGP10 Gene

small nuclear ribonucleoprotein polypeptide G pseudogene 10

SNRPGP15 Gene

small nuclear ribonucleoprotein polypeptide G pseudogene 15

RNU1-17P Gene

RNA, U1 small nuclear 17, pseudogene

RNU2-2P Gene

RNA, U2 small nuclear 2, pseudogene

RNU5F-2P Gene

RNA, U5F small nuclear 2, pseudogene

RNU7-74P Gene

RNA, U7 small nuclear 74 pseudogene

RNU6-50P Gene

RNA, U6 small nuclear 50, pseudogene

SMIM3 Gene

small integral membrane protein 3

SMIM7 Gene

small integral membrane protein 7

SMIM6 Gene

small integral membrane protein 6

SMIM5 Gene

small integral membrane protein 5

SMIM4 Gene

small integral membrane protein 4

SMIM9 Gene

small integral membrane protein 9

SMIM8 Gene

small integral membrane protein 8

SNORD115-36 Gene

small nucleolar RNA, C/D box 115-36

SNORD115-37 Gene

small nucleolar RNA, C/D box 115-37

SNORD115-33 Gene

small nucleolar RNA, C/D box 115-33

SNORD115-30 Gene

small nucleolar RNA, C/D box 115-30

SNORD115-31 Gene

small nucleolar RNA, C/D box 115-31

RNU5E-2P Gene

RNA, U5E small nuclear 2, pseudogene

SNORD50A Gene

small nucleolar RNA, C/D box 50A

SNORD50A belongs to the C/D box class of small nucleolar RNAs (snoRNAs), which are thought to function as guide RNAs in the site-specific ribose methylation of preribosomal RNA (Kiss-Laszlo et al., 1996 [PubMed 8674114]).[supplied by OMIM, Nov 2009]

SNORD50B Gene

small nucleolar RNA, C/D box 50B

SNORD50B is a C/D box-type small nucleolar RNA (snoRNA) that is predicted to function as a guide RNA in 2-prime O-methylation of 28S ribosomal RNA (Tanaka et al., 2000 [PubMed 10792466]).[supplied by OMIM, Feb 2010]

SNORA16B Gene

small nucleolar RNA, H/ACA box 16B

SNRNP25 Gene

small nuclear ribonucleoprotein 25kDa (U11/U12)

Two types of spliceosomes catalyze splicing of pre-mRNAs. The major U2-type spliceosome is found in all eukaryotes and removes U2-type introns, which represent more than 99% of pre-mRNA introns. The minor U12-type spliceosome is found in some eukaryotes and removes U12-type introns, which are rare and have distinct splice consensus signals. The U12-type spliceosome consists of several small nuclear RNAs and associated proteins. This gene encodes a 25K protein that is a component of the U12-type spliceosome. [provided by RefSeq, Apr 2010]

SNRNP27 Gene

small nuclear ribonucleoprotein 27kDa (U4/U6.U5)

This gene encodes a serine/arginine-rich (SR) protein. SR proteins play important roles in pre-mRNA splicing by facilitating the recognition and selection of splice sites. The encoded protein associates with the 25S U4/U6.U5 tri-snRNP, a major component of the U2-type spiceosome. The expression of this gene may be altered in cells infected with the human T-cell lymphotropic virus type 1 (HTLV-1) retrovirus. A pseudogene of this gene is located on the long arm of chromosome 5. Alternatively spliced transcript variants have been observed for this gene. [provided by RefSeq, Feb 2011]

RNU6-82P Gene

RNA, U6 small nuclear 82, pseudogene

RNU1-24P Gene

RNA, U1 small nuclear 24, pseudogene

RNU7-43P Gene

RNA, U7 small nuclear 43 pseudogene

SNORA11E Gene

small nucleolar RNA, H/ACA box 11E

SPRR1A Gene

small proline-rich protein 1A

SPRR1B Gene

small proline-rich protein 1B

SERF1A Gene

small EDRK-rich factor 1A (telomeric)

This gene is part of a 500 kb inverted duplication on chromosome 5q13. This duplicated region contains at least four genes and repetitive elements which make it prone to rearrangements and deletions. The repetitiveness and complexity of the sequence have also caused difficulty in determining the organization of this genomic region. The duplication region includes both a telomeric and a centromeric copy of this gene. Deletions of this gene, the telomeric copy, often accompany deletions of the neighboring SMN1 gene in spinal muscular atrophy (SMA) patients, and so it is thought that this gene may be a modifier of the SMA phenotype. The function of this protein is not known; however, it bears low-level homology with the RNA-binding domain of matrin-cyclophilin, a protein which colocalizes with small nuclear ribonucleoproteins (snRNPs) and the SMN1 gene product. Alternatively spliced transcripts have been documented but it is unclear whether alternative splicing occurs for both the centromeric and telomeric copies of the gene. [provided by RefSeq, Jul 2008]

SERF1B Gene

small EDRK-rich factor 1B (centromeric)

This gene is part of a 500 kb inverted duplication on chromosome 5q13. This duplicated region contains at least four genes and repetitive elements which make it prone to rearrangements and deletions. The repetitiveness and complexity of the sequence have also caused difficulty in determining the organization of this genomic region. This gene is the centromeric copy which is identical to the telomeric copy. Alternatively spliced transcripts have been documented but it is unclear whether alternative splicing occurs for both the centromeric and telomeric copies of the gene. The gene encodes a protein of unknown function which bears low-level homology with the RNA-binding domain of matrin-cyclophilin, a protein which colocalizes with small nuclear ribonucleoproteins (snRNPs) and the SMN1 gene product. [provided by RefSeq, Jul 2008]

RNU7-66P Gene

RNA, U7 small nuclear 66 pseudogene

RNU6-19P Gene

RNA, U6 small nuclear 19, pseudogene

LOC100736412 Gene

ash2 (absent, small, or homeotic)-like (Drosophila) pseudogene

SNORA69 Gene

small nucleolar RNA, H/ACA box 69

This gene encodes a member of the family of box ACA small nucleolar RNAs, characterized by a consensus ACA motif positioned 3 nucleotides from the 3' end of the RNAs and a double-hairpin structure. The box ACA small nucleolar RNAs may play a role in rRNA maturation. This gene is co-transcribed with the ribosomal protein L39 gene. [provided by RefSeq, Oct 2009]

RNU4-3P Gene

RNA, U4 small nuclear 3, pseudogene

RNU6-16P Gene

RNA, U6 small nuclear 16, pseudogene

IMP3 Gene

IMP3, U3 small nucleolar ribonucleoprotein

This gene encodes the human homolog of the yeast Imp3 protein. The protein localizes to the nucleoli and interacts with the U3 snoRNP complex. The protein contains an S4 domain. [provided by RefSeq, Jul 2008]

IMP4 Gene

IMP4, U3 small nucleolar ribonucleoprotein

IMP4 forms a ternary complex with IMP3 (MIM 612980) and MPP10 (MPHOSPHO10; MIM 605503) that interacts with U3 small nucleolar RNA (snoRNA), which is required for the early cleavage steps in pre-rRNA processing (Granneman et al., 2003 [PubMed 12655004]).[supplied by OMIM, Aug 2009]

SNORA70B Gene

small nucleolar RNA, H/ACA box 70B

SNORA70D Gene

small nucleolar RNA, H/ACA box 70D

SNORA70E Gene

small nucleolar RNA, H/ACA box 70E

SNORA70F Gene

small nucleolar RNA, H/ACA box 70F

SNORA70G Gene

small nucleolar RNA, H/ACA box 70G

RNU7-9P Gene

RNA, U7 small nuclear 9 pseudogene

RNU7-82P Gene

RNA, U7 small nuclear 82 pseudogene

RNU7-17P Gene

RNA, U7 small nuclear 17 pseudogene

RNU105B Gene

RNA, U105B small nucleolar

LOC401703 Gene

U2 small nuclear RNA auxiliary factor 1-like 4 pseudogene

RNU6-6P Gene

RNA, U6 small nuclear 6, pseudogene

SMIM10L2B Gene

small integral membrane protein 10 like 2B

RNVU1-20 Gene

RNA, variant U1 small nuclear 20

LOC100736411 Gene

ash2 (absent, small, or homeotic)-like (Drosophila) pseudogene

RNU4-1 Gene

RNA, U4 small nuclear 1

RNU7-37P Gene

RNA, U7 small nuclear 37 pseudogene

SNORA7B Gene

small nucleolar RNA, H/ACA box 7B

SNORA7A Gene

small nucleolar RNA, H/ACA box 7A

SNORA79 Gene

small nucleolar RNA, H/ACA box 79

SNORA78 Gene

small nucleolar RNA, H/ACA box 78

SNORA77 Gene

small nucleolar RNA, H/ACA box 77

SNORA75 Gene

small nucleolar RNA, H/ACA box 75

SNORA72 Gene

small nucleolar RNA, H/ACA box 72

SNORA70 Gene

small nucleolar RNA, H/ACA box 70

SNORD49B Gene

small nucleolar RNA, C/D box 49B

LOC100130001 Gene

small nuclear ribonucleoprotein polypeptide B pseudogene

SNORD116-30 Gene

small nucleolar RNA, C/D box 116-30

RNU7-18P Gene

RNA, U7 small nuclear 18 pseudogene

RNU86 Gene

RNA, U86 small nucleolar

Intronic regions of ribosomal protein genes can harbor noncoding small nucleolar RNAs (snoRNAs), like U86, which are generated during pre-mRNA processing. snoRNAs form part of the small nucleolar ribonucleoprotein particles (snoRNPs) involved in pre-rRNA processing and modification. snoRNAs of the box C/D class, like U86, function in 2-prime-O-ribose methylation of rRNAs (Duga et al., 2000 [PubMed 10684968]).[supplied by OMIM, Mar 2008]

HSPB11 Gene

heat shock protein family B (small), member 11

SNORD51 Gene

small nucleolar RNA, C/D box 51

SNORD52 Gene

small nucleolar RNA, C/D box 52

SNORD53 Gene

small nucleolar RNA, C/D box 53

SNORD54 Gene

small nucleolar RNA, C/D box 54

SNORD55 Gene

small nucleolar RNA, C/D box 55

SNORD57 Gene

small nucleolar RNA, C/D box 57

SNORD116-24 Gene

small nucleolar RNA, C/D box 116-24

SNORD116-26 Gene

small nucleolar RNA, C/D box 116-26

SNORD116-22 Gene

small nucleolar RNA, C/D box 116-22

SNORD116-23 Gene

small nucleolar RNA, C/D box 116-23

KRR1P1 Gene

KRR1, small subunit (SSU) processome component, homolog (yeast) pseudogene 1

RNU1-14P Gene

RNA, U1 small nuclear 14, pseudogene

SNORD116-28 Gene

small nucleolar RNA, C/D box 116-28

LOC150417 Gene

small nuclear ribonucleoprotein polypeptide A' pseudogene

RNU6ATAC2P Gene

RNA, U6atac small nuclear 2, pseudogene

RNU5F-5P Gene

RNA, U5F small nuclear 5, pseudogene

SNRPA1 Gene

small nuclear ribonucleoprotein polypeptide A'

UTP15 Gene

UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)

SCARNA9L Gene

small Cajal body-specific RNA 9-like

RNU7-71P Gene

RNA, U7 small nuclear 71 pseudogene

SNORA36B Gene

small nucleolar RNA, H/ACA box 36B

SNORA36C Gene

small nucleolar RNA, H/ACA box 36C

RNVU1-3 Gene

RNA, variant U1 small nuclear 3

RNU6-68P Gene

RNA, U6 small nuclear 68, pseudogene

RNU6-57P Gene

RNA, U6 small nuclear 57, pseudogene

SNORD115-18 Gene

small nucleolar RNA, C/D box 115-18

SNORD115-19 Gene

small nucleolar RNA, C/D box 115-19

SNORD115-15 Gene

small nucleolar RNA, C/D box 115-15

SNORD115-11 Gene

small nucleolar RNA, C/D box 115-11

SNORD115-12 Gene

small nucleolar RNA, C/D box 115-12

SNORD115-13 Gene

small nucleolar RNA, C/D box 115-13

SNORD114-14 Gene

small nucleolar RNA, C/D box 114-14

CAPNS1 Gene

calpain, small subunit 1

This gene is a member of the calpain small subunit family. Calpains are calcium-dependent cysteine proteinases that are widely distributed in mammalian cells. Calpains operate as heterodimers, comprising a specific large catalytic subunit (calpain 1 subunit in Calpain I, and calpain 2 subunit in Calpain II), and a common small regulatory subunit encoded by this gene. This encoded protein is essential for the stability and function of both calpain heterodimers, whose proteolytic activities influence various cellular functions including apoptosis, proliferation, migration, adhesion, and autophagy. Calpains have been implicated in neurodegenerative processes, such as myotonic dystrophy. A pseudogene of this gene has been defined on chromosome 1. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2014]

CAPNS2 Gene

calpain, small subunit 2

SNORD73B Gene

small nucleolar RNA, C/D box U73B (pseudogene)

SNORD73A Gene

small nucleolar RNA, C/D box 73A

SNAR-I Gene

small ILF3/NF90-associated RNA I

LSM7 Gene

LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)

Sm-like proteins were identified in a variety of organisms based on sequence homology with the Sm protein family (see SNRPD2; MIM 601061). Sm-like proteins contain the Sm sequence motif, which consists of 2 regions separated by a linker of variable length that folds as a loop. The Sm-like proteins are thought to form a stable heteromer present in tri-snRNP particles, which are important for pre-mRNA splicing.[supplied by OMIM, Apr 2004]

LSM1 Gene

LSM1, U6 small nuclear RNA associated

This gene encodes a member of the LSm family of RNA-binding proteins. LSm proteins form stable heteromers that bind specifically to the 3'-terminal oligo(U) tract of U6 snRNA and may play a role in pre-mRNA splicing by mediating U4/U6 snRNP formation. Increased expression of this gene may play a role in cellular transformation and the progression of several malignancies including lung cancer, mesothelioma and breast cancer. Alternatively spliced transcript variants have been observed for this gene, and a pseudogene of this gene is located on the short arm of chromosome 9. [provided by RefSeq, Nov 2011]

LSM2 Gene

LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)

This gene encodes a member of the LSm family of RNA-binding proteins. LSm proteins form stable heteromers that bind specifically to the 3'-terminal oligo(U) tract of U6 snRNA and may play a role in pre-mRNA splicing by mediating U4/U6 snRNP formation. Pseudogenes of this gene are located on the short arm of chromosomes 6 and 19. [provided by RefSeq, Nov 2011]

RNU6-72P Gene

RNA, U6 small nuclear 72, pseudogene

RNU5E-7P Gene

RNA, U5E small nuclear 7, pseudogene

RNU12 Gene

RNA, U12 small nuclear

RNU11 Gene

RNA, U11 small nuclear

RNU4-8P Gene

RNA, U4 small nuclear 8, pseudogene

RNU7-58P Gene

RNA, U7 small nuclear 58 pseudogene

RNU5A-7P Gene

RNA, U5A small nuclear 7, pseudogene

RNU7-23P Gene

RNA, U7 small nuclear 23 pseudogene

SNORD109A Gene

small nucleolar RNA, C/D box 109A

This gene encodes a C/D box-type small nucleolar RNA that is expressed predominantly in the brain. Expression of this RNA is not detectable in the brains of patients with Prader-Willi syndrome. [provided by RefSeq, Jun 2010]

SNORD109B Gene

small nucleolar RNA, C/D box 109B

This gene encodes a C/D box-type small nucleolar RNA that is expressed predominantly in the brain. Expression of this RNA is not detectable in the brains of patients with Prader-Willi syndrome. [provided by RefSeq, Jun 2010]

SNORA70C Gene

small nucleolar RNA, H/ACA box 70C

This gene produces a small nucleolar RNA (snoRNA) that plays a role in post-transcriptional modification. This snoRNA is a type-3 retrotransposed snoRNA, where the ribosomal protein L10 gene on chromosome X is its parental gene, and this, together with part of the parental gene, was subsequently mobilized into an intron of the astrotactin 2 host gene on chromosome 9. This snoRNA contains a H/ACA box, which serves as a guide for the pseudouridylation of selected bases of ribosomal RNA by forming short duplexes with the 18S rRNA U1692, the target for this snoRNA. This gene is specific to human, chimp and orangutan, and is not found in the genomes of rhesus or marmoset. [provided by RefSeq, Jun 2010]

SNRPEP9 Gene

small nuclear ribonucleoprotein polypeptide E pseudogene 9

SNRPEP8 Gene

small nuclear ribonucleoprotein polypeptide E pseudogene 8

SNRPEP5 Gene

small nuclear ribonucleoprotein polypeptide E pseudogene 5

SNRPEP4 Gene

small nuclear ribonucleoprotein polypeptide E pseudogene 4

SNRPEP7 Gene

small nuclear ribonucleoprotein polypeptide E pseudogene 7

SNRPEP6 Gene

small nuclear ribonucleoprotein polypeptide E pseudogene 6

SNRPEP1 Gene

small nuclear ribonucleoprotein polypeptide E pseudogene 1

SNRPEP3 Gene

small nuclear ribonucleoprotein polypeptide E pseudogene 3

SNRPEP2 Gene

small nuclear ribonucleoprotein polypeptide E pseudogene 2

SNORA51 Gene

small nucleolar RNA, H/ACA box 51

SNORA11D Gene

small nucleolar RNA, H/ACA box 11D

SNRPCP1 Gene

small nuclear ribonucleoprotein polypeptide C pseudogene 1

SCARNA13 Gene

small Cajal body-specific RNA 13

SCARNA12 Gene

small Cajal body-specific RNA 12

This gene produces a small nuclear RNA that localizes specifically to Cajal bodies, which are conserved subnuclear organelles that are present in the nucleoplasm. This RNA is processed from an intron of the prohibitin 2 host gene. It includes both an H/ACA box and a C/D box, and is thought to guide the pseudouridylation of residue U46 in the U5 small nuclear RNA. [provided by RefSeq, Jun 2010]

SCARNA11 Gene

small Cajal body-specific RNA 11

SCARNA10 Gene

small Cajal body-specific RNA 10

SCARNA17 Gene

small Cajal body-specific RNA 17

SCARNA16 Gene

small Cajal body-specific RNA 16

SCARNA15 Gene

small Cajal body-specific RNA 15

SCARNA14 Gene

small Cajal body-specific RNA 14

SCARNA18 Gene

small Cajal body-specific RNA 18

Small nucleolar RNAs (snoRNAs) are small noncoding RNAs involved in RNA processing. Box H/ACA snoRNAs, such as SCARNA18, direct the conversion of uridine to pseudouridine at specific residues of ribosomal RNAs or small nuclear RNAs (snRNAs) (Gu et al., 2005).[supplied by OMIM, Mar 2008]

SMAP1 Gene

small ArfGAP 1

The protein encoded by this gene is similar to the mouse stromal membrane-associated protein-1. This similarity suggests that this human gene product is also a type II membrane glycoprotein involved in the erythropoietic stimulatory activity of stromal cells. Alternate splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008]

SMAP2 Gene

small ArfGAP2

RNU7-89P Gene

RNA, U7 small nuclear 89 pseudogene

LOC101929087 Gene

small ubiquitin-related modifier 2-like

SNORA45B Gene

small nucleolar RNA, H/ACA box 45B

Small nucleolar RNAs (snoRNAs) are small noncoding RNAs involved in RNA processing. Box H/ACA snoRNAs, such as SNORA45, direct the conversion of uridine to pseudouridine at specific residues of ribosomal RNAs or small nuclear RNAs (snRNAs) (Gu et al., 2005).[supplied by OMIM, Mar 2008]

SNORA21 Gene

small nucleolar RNA, H/ACA box 21

SNORA24 Gene

small nucleolar RNA, H/ACA box 24

SNORA28 Gene

small nucleolar RNA, H/ACA box 28

SNORA29 Gene

small nucleolar RNA, H/ACA box 29

SNORD118 Gene

small nucleolar RNA, C/D box 118

SNORD119 Gene

small nucleolar RNA, C/D box 119

SNORD117 Gene

small nucleolar RNA, C/D box 117

SNORD112 Gene

small nucleolar RNA, C/D box 112

Small nucleolar RNAs (snoRNAs), like SNORD112, guide the formation of 2-prime O-methylation of ribosomal RNA (rRNA) and U small nuclear RNAs (snRNAs) through a specific RNA duplex at each modification site (Cavaille et al., 2002 [PubMed 12045206]).[supplied by OMIM, Nov 2010]

SNORD110 Gene

small nucleolar RNA, C/D box 110

SNORD111 Gene

small nucleolar RNA, C/D box 111

RNU7-61P Gene

RNA, U7 small nuclear 61 pseudogene

SNORD11B Gene

small nucleolar RNA, C/D box 11B

RNU7-63P Gene

RNA, U7 small nuclear 63 pseudogene

SNRPGP2 Gene

small nuclear ribonucleoprotein polypeptide G pseudogene 2

SNAR-C5 Gene

small ILF3/NF90-associated RNA C5

SNAR-C4 Gene

small ILF3/NF90-associated RNA C4

SNAR-C1 Gene

small ILF3/NF90-associated RNA C1

SNAR-C2 Gene

small ILF3/NF90-associated RNA C2

RNU12-2P Gene

RNA, U12 small nuclear 2, pseudogene

SCARNA9 Gene

small Cajal body-specific RNA 9

SCARNA8 Gene

small Cajal body-specific RNA 8

SCARNA7 Gene

small Cajal body-specific RNA 7

SCARNA3 Gene

small Cajal body-specific RNA 3

SCARNA1 Gene

small Cajal body-specific RNA 1

SNRPEP10 Gene

small nuclear ribonucleoprotein polypeptide E pseudogene 10

RNU7-46P Gene

RNA, U7 small nuclear 46 pseudogene

SNORD36A Gene

small nucleolar RNA, C/D box 36A

SNORD36C Gene

small nucleolar RNA, C/D box 36C

SNORD36B Gene

small nucleolar RNA, C/D box 36B

RNU5A-1 Gene

RNA, U5A small nuclear 1

SNORA38B Gene

small nucleolar RNA, H/ACA box 38B

RNU6-35P Gene

RNA, U6 small nuclear 35, pseudogene

SNRPD2P2 Gene

small nuclear ribonucleoprotein D2 pseudogene 2

SNRPD2P1 Gene

small nuclear ribonucleoprotein D2 pseudogene 1

SNORD116-9 Gene

small nucleolar RNA, C/D box 116-9

SNORD116-8 Gene

small nucleolar RNA, C/D box 116-8

SNORD116-4 Gene

small nucleolar RNA, C/D box 116-4

SNORD116-1 Gene

small nucleolar RNA, C/D box 116-1

SNORD116-3 Gene

small nucleolar RNA, C/D box 116-3

SNORD116-2 Gene

small nucleolar RNA, C/D box 116-2

RNU7-40P Gene

RNA, U7 small nuclear 40 pseudogene

RNU7-69P Gene

RNA, U7 small nuclear 69 pseudogene

RNU7-34P Gene

RNA, U7 small nuclear 34 pseudogene

SNORD19B Gene

small nucleolar RNA, C/D box 19B

RNU5B-4P Gene

RNA, U5B small nuclear 4, pseudogene

RNU7-55P Gene

RNA, U7 small nuclear 55 pseudogene

RNU5A-3P Gene

RNA, U5A small nuclear 3, pseudogene

SNORD21 Gene

small nucleolar RNA, C/D box 21

This gene encodes a small nucleolar RNA (snoRNA) that may be involved in biogenesis of the large (28S) ribosomal subunit. This gene is found within an intron of the RPL5 gene. [provided by RefSeq, Mar 2009]

SNORD20 Gene

small nucleolar RNA, C/D box 20

SNORD22 Gene

small nucleolar RNA, C/D box 22

SNORD25 Gene

small nucleolar RNA, C/D box 25

SNORD24 Gene

small nucleolar RNA, C/D box 24

SNORD27 Gene

small nucleolar RNA, C/D box 27

SNORD26 Gene

small nucleolar RNA, C/D box 26

SNORD29 Gene

small nucleolar RNA, C/D box 29

SNORD28 Gene

small nucleolar RNA, C/D box 28

RNU105C Gene

RNA, U105C small nucleolar

LOC100422088 Gene

ash2 (absent, small, or homeotic)-like (Drosophila) pseudogene

SNAR-A9 Gene

small ILF3/NF90-associated RNA A9

RNU7-26P Gene

RNA, U7 small nuclear 26 pseudogene

SNAR-A1 Gene

small ILF3/NF90-associated RNA A1

SNRPN Gene

small nuclear ribonucleoprotein polypeptide N

The protein encoded by this gene is one polypeptide of a small nuclear ribonucleoprotein complex and belongs to the snRNP SMB/SMN family. The protein plays a role in pre-mRNA processing, possibly tissue-specific alternative splicing events. Although individual snRNPs are believed to recognize specific nucleic acid sequences through RNA-RNA base pairing, the specific role of this family member is unknown. The protein arises from a bicistronic transcript that also encodes a protein identified as the SNRPN upstream reading frame (SNURF). Multiple transcription initiation sites have been identified and extensive alternative splicing occurs in the 5' untranslated region. Additional splice variants have been described but sequences for the complete transcripts have not been determined. The 5' UTR of this gene has been identified as an imprinting center. Alternative splicing or deletion caused by a translocation event in this paternally-expressed region is responsible for Angelman syndrome or Prader-Willi syndrome due to parental imprint switch failure. [provided by RefSeq, Jul 2008]

SNRPB Gene

small nuclear ribonucleoprotein polypeptides B and B1

The protein encoded by this gene is one of several nuclear proteins that are found in common among U1, U2, U4/U6, and U5 small ribonucleoprotein particles (snRNPs). These snRNPs are involved in pre-mRNA splicing, and the encoded protein may also play a role in pre-mRNA splicing or snRNP structure. Autoantibodies from patients with systemic lupus erythematosus frequently recognize epitopes on the encoded protein. Two transcript variants encoding different isoforms (B and B') have been found for this gene. [provided by RefSeq, Jul 2008]

SNRPC Gene

small nuclear ribonucleoprotein polypeptide C

This gene encodes one of the specific protein components of the U1 small nuclear ribonucleoprotein (snRNP) particle required for the formation of the spliceosome. The encoded protein participates in the processing of nuclear precursor messenger RNA splicing. snRNP particles are attacked by autoantibodies frequently produced by patients with connective tissue diseases. The genome contains several pseudogenes of this functional gene. Alternative splicing results in a non-coding transcript variant.[provided by RefSeq, Oct 2009]

SNRPA Gene

small nuclear ribonucleoprotein polypeptide A

The protein encoded by this gene associates with stem loop II of the U1 small nuclear ribonucleoprotein, which binds the 5' splice site of precursor mRNAs and is required for splicing. The encoded protein autoregulates itself by polyadenylation inhibition of its own pre-mRNA via dimerization and has been implicated in the coupling of splicing and polyadenylation. [provided by RefSeq, Oct 2010]

SNRPF Gene

small nuclear ribonucleoprotein polypeptide F

SNRPG Gene

small nuclear ribonucleoprotein polypeptide G

SNRPE Gene

small nuclear ribonucleoprotein polypeptide E

CAPNS1P1 Gene

calpain, small subunit 1 pseudogene 1

RNVU1-8 Gene

RNA, variant U1 small nuclear 8

RNVU1-4 Gene

RNA, variant U1 small nuclear 4

RNVU1-6 Gene

RNA, variant U1 small nuclear 6

RNVU1-7 Gene

RNA, variant U1 small nuclear 7

RNVU1-1 Gene

RNA, variant U1 small nuclear 1

SNORA20 Gene

small nucleolar RNA, H/ACA box 20

SNORA22 Gene

small nucleolar RNA, H/ACA box 22

SNORA23 Gene

small nucleolar RNA, H/ACA box 23

SNORA25 Gene

small nucleolar RNA, H/ACA box 25

SNORA26 Gene

small nucleolar RNA, H/ACA box 26

SNORA27 Gene

small nucleolar RNA, H/ACA box 27

SNORA2A Gene

small nucleolar RNA, H/ACA box 2A

SNORA2B Gene

small nucleolar RNA, H/ACA box 2B

SERF1AP1 Gene

small EDRK-rich factor 1A (telomeric) pseudogene 1

U2AF1 Gene

U2 small nuclear RNA auxiliary factor 1

This gene belongs to the splicing factor SR family of genes. U2 auxiliary factor, comprising a large and a small subunit, is a non-snRNP protein required for the binding of U2 snRNP to the pre-mRNA branch site. This gene encodes the small subunit which plays a critical role in both constitutive and enhancer-dependent RNA splicing by directly mediating interactions between the large subunit and proteins bound to the enhancers. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2008]

U2AF2 Gene

U2 small nuclear RNA auxiliary factor 2

U2 auxiliary factor (U2AF), comprised of a large and a small subunit, is a non-snRNP protein required for the binding of U2 snRNP to the pre-mRNA branch site. This gene encodes the U2AF large subunit which contains a sequence-specific RNA-binding region with 3 RNA recognition motifs and an Arg/Ser-rich domain necessary for splicing. The large subunit binds to the polypyrimidine tract of introns early during spliceosome assembly. Multiple transcript variants have been detected for this gene, but the full-length natures of only two have been determined to date. [provided by RefSeq, Jul 2008]

RNU6-75P Gene

RNA, U6 small nuclear 75, pseudogene

SNORD56B Gene

small nucleolar RNA, C/D box 56B

RNU5E-4P Gene

RNA, U5E small nuclear 4, pseudogene

SNRPCP19 Gene

small nuclear ribonucleoprotein polypeptide C pseudogene 19

SNRPCP18 Gene

small nuclear ribonucleoprotein polypeptide C pseudogene 18

SNRPCP15 Gene

small nuclear ribonucleoprotein polypeptide C pseudogene 15

SNRPCP14 Gene

small nuclear ribonucleoprotein polypeptide C pseudogene 14

SNRPCP12 Gene

small nuclear ribonucleoprotein polypeptide C pseudogene 12

SNRPCP11 Gene

small nuclear ribonucleoprotein polypeptide C pseudogene 11

SNORD116-20 Gene

small nucleolar RNA, C/D box 116-20

SNORD116-29 Gene

small nucleolar RNA, C/D box 116-29

RNU1-11P Gene

RNA, U1 small nuclear 11, pseudogene

RNU7-7P Gene

RNA, U7 small nuclear 7 pseudogene

LOC100130842 Gene

small integral membrane protein 7 pseudogene

RNU6-81P Gene

RNA, U6 small nuclear 81, pseudogene

RNU7-76P Gene

RNA, U7 small nuclear 76 pseudogene

UTP23 Gene

UTP23, small subunit (SSU) processome component, homolog (yeast)

UTP20 Gene

UTP20, small subunit (SSU) processome component, homolog (yeast)

UTP20 is a component of the U3 small nucleolar RNA (snoRNA) (SNORD3A; MIM 180710) protein complex (U3 snoRNP) and is involved in 18S rRNA processing (Wang et al., 2007 [PubMed 17498821]).[supplied by OMIM, Jun 2009]

RNU4-2 Gene

RNA, U4 small nuclear 2

SNRPFP4 Gene

small nuclear ribonucleoprotein polypeptide F pseudogene 4

SNRPFP2 Gene

small nuclear ribonucleoprotein polypeptide F pseudogene 2

SNRPFP1 Gene

small nuclear ribonucleoprotein polypeptide F pseudogene 1

SNHG10 Gene

small nucleolar RNA host gene 10

This gene is small nucleolar RNA host gene 10 and represents a non-protein coding RNA. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Jan 2013]

SUMO1 Gene

small ubiquitin-like modifier 1

This gene encodes a protein that is a member of the SUMO (small ubiquitin-like modifier) protein family. It functions in a manner similar to ubiquitin in that it is bound to target proteins as part of a post-translational modification system. However, unlike ubiquitin which targets proteins for degradation, this protein is involved in a variety of cellular processes, such as nuclear transport, transcriptional regulation, apoptosis, and protein stability. It is not active until the last four amino acids of the carboxy-terminus have been cleaved off. Several pseudogenes have been reported for this gene. Alternate transcriptional splice variants encoding different isoforms have been characterized. [provided by RefSeq, Jul 2008]

SUMO2 Gene

small ubiquitin-like modifier 2

This gene encodes a protein that is a member of the SUMO (small ubiquitin-like modifier) protein family. It functions in a manner similar to ubiquitin in that it is bound to target proteins as part of a post-translational modification system. However, unlike ubiquitin which targets proteins for degradation, this protein is involved in a variety of cellular processes, such as nuclear transport, transcriptional regulation, apoptosis, and protein stability. It is not active until the last two amino acids of the carboxy-terminus have been cleaved off. Numerous pseudogenes have been reported for this gene. Alternate transcriptional splice variants, encoding different isoforms, have been characterized. [provided by RefSeq, Jul 2008]

SUMO4 Gene

small ubiquitin-like modifier 4

This gene is a member of the SUMO gene family. This family of genes encode small ubiquitin-related modifiers that are attached to proteins and control the target proteins' subcellular localization, stability, or activity. The protein described in this record is located in the cytoplasm and specifically modifies IKBA, leading to negative regulation of NF-kappa-B-dependent transcription of the IL12B gene. A specific polymorphism in this SUMO gene, which leads to the M55V substitution, has been associated with type I diabetes. The RefSeq contains this polymorphism. [provided by RefSeq, Jul 2008]

LOC100652840 Gene

M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) pseudogene

RNU4-5P Gene

RNA, U4 small nuclear 5, pseudogene

SNRPGP3 Gene

small nuclear ribonucleoprotein polypeptide G pseudogene 3

LOC100129492 Gene

small nuclear ribonucleoprotein Sm D1 pseudogene

SGSM2 Gene

small G protein signaling modulator 2

SGSM1 Gene

small G protein signaling modulator 1

SNORA14B Gene

small nucleolar RNA, H/ACA box 14B

Small nucleolar RNAs (snoRNAs) are 60-150 nt long non-coding RNAs, and include two groups: C/D box snoRNAs and H/ACA box snoRNAs. The C/D box snoRNAs are guides for the 2'-O-ribose methylation of rRNAs or snRNAs. The H/ACA box snoRNAs are guides for the isomerization of uridine residues into pseudouridine. This gene belongs to the group of the H/ACA box snoRNAs, and functions in 18S rRNA pseudouridylation at position U966. The gene duplication generates a 91% identical copy on chromosome 7. [provided by RefSeq, Oct 2008]

SNORA14A Gene

small nucleolar RNA, H/ACA box 14A

Small nucleolar RNAs (snoRNAs) are 60-150 nt long non-coding RNAs, and include two groups: C/D box snoRNAs and H/ACA box snoRNAs. The C/D box snoRNAs are guides for the 2'-O-ribose methylation of rRNAs or snRNAs. The H/ACA box snoRNAs are guides for the isomerization of uridine residues into pseudouridine. This gene belongs to the group of the H/ACA box snoRNAs, and functions in 18S rRNA pseudouridylation at position U966. The gene duplication generates a 91% identical copy on chromosome 1. [provided by RefSeq, Oct 2008]

RNU4-10P Gene

RNA, U4 small nuclear 10, pseudogene

LOC101929240 Gene

U5 small nuclear ribonucleoprotein 200 kDa helicase pseudogene

RNU1-19P Gene

RNA, U1 small nuclear 19, pseudogene

RNU6-14P Gene

RNA, U6 small nuclear 14, pseudogene

RNU5F-8P Gene

RNA, U5F small nuclear 8, pseudogene

SNORD35A Gene

small nucleolar RNA, C/D box 35A

SNORD35B Gene

small nucleolar RNA, C/D box 35B

SMIM10L2A Gene

small integral membrane protein 10 like 2A

RNU7-45P Gene

RNA, U7 small nuclear 45 pseudogene

RNU7-84P Gene

RNA, U7 small nuclear 84 pseudogene

RNU6-30P Gene

RNA, U6 small nuclear 30, pseudogene

SNORD13P1 Gene

small nucleolar RNA, C/D box 13 pseudogene 1

SNORD13P3 Gene

small nucleolar RNA, C/D box 13 pseudogene 3

SNORD13P2 Gene

small nucleolar RNA, C/D box 13 pseudogene 2

RNU6-78P Gene

RNA, U6 small nuclear 78, pseudogene

LOC100422645 Gene

CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 pseudogene

RNU7-39P Gene

RNA, U7 small nuclear 39 pseudogene

SNORD14E Gene

small nucleolar RNA, C/D box 14E

SNORD14D Gene

small nucleolar RNA, C/D box 14D

SNORD14A Gene

small nucleolar RNA, C/D box 14A

SNORD14C Gene

small nucleolar RNA, C/D box 14C

SNORD14B Gene

small nucleolar RNA, C/D box 14B

SNORD49A Gene

small nucleolar RNA, C/D box 49A

RNU7-64P Gene

RNA, U7 small nuclear 64 pseudogene

LOC100533850 Gene

M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) pseudogene

RNU7-70P Gene

RNA, U7 small nuclear 70 pseudogene

SNORA37 Gene

small nucleolar RNA, H/ACA box 37

RNU7-56P Gene

RNA, U7 small nuclear 56 pseudogene

RNU5F-1 Gene

RNA, U5F small nuclear 1

SNORD62A Gene

small nucleolar RNA, C/D box 62A

SNORD114-22 Gene

small nucleolar RNA, C/D box 114-22

SNORD114-23 Gene

small nucleolar RNA, C/D box 114-23

SNORD114-21 Gene

small nucleolar RNA, C/D box 114-21

SNORD114-26 Gene

small nucleolar RNA, C/D box 114-26

SNORD114-27 Gene

small nucleolar RNA, C/D box 114-27

SNORD114-24 Gene

small nucleolar RNA, C/D box 114-24

SNORD114-25 Gene

small nucleolar RNA, C/D box 114-25

SNORD114-28 Gene

small nucleolar RNA, C/D box 114-28

SNORD114-29 Gene

small nucleolar RNA, C/D box 114-29

RNU7-15P Gene

RNA, U7 small nuclear 15 pseudogene

RNU1-1 Gene

RNA, U1 small nuclear 1

RNU1-4 Gene

RNA, U1 small nuclear 4

SNAR-H Gene

small ILF3/NF90-associated RNA H

LOC100631375 Gene

M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) pseudogene

RNU6-59P Gene

RNA, U6 small nuclear 59, pseudogene

RNU7-31P Gene

RNA, U7 small nuclear 31 pseudogene

LOC105379766 Gene

small nuclear ribonucleoprotein-associated protein N-like

SNORA5A Gene

small nucleolar RNA, H/ACA box 5A

SNORA5C Gene

small nucleolar RNA, H/ACA box 5C

Small nucleolar RNAs (snoRNAs) are small noncoding RNAs involved in RNA processing. Box H/ACA snoRNAs, such as SNORA5C, direct the conversion of uridine to pseudouridine at specific residues of ribosomal RNAs or small nuclear RNAs (snRNAs) (Gu et al., 2005).[supplied by OMIM, Mar 2008]

SNORA5B Gene

small nucleolar RNA, H/ACA box 5B

SNORA58 Gene

small nucleolar RNA, H/ACA box 58

SNORA52 Gene

small nucleolar RNA, H/ACA box 52

SNORA55 Gene

small nucleolar RNA, H/ACA box 55

SNORA54 Gene

small nucleolar RNA, H/ACA box 54

SNORA57 Gene

small nucleolar RNA, H/ACA box 57

SNORA56 Gene

small nucleolar RNA, H/ACA box 56

Biosynthesis of stable cellular RNAs such as tRNAs, rRNAs, snRNAs, and snoRNAs is aided by covalent nucleotide modification after transcription. The modified nucleotides are involved in correct RNA folding, establishment of correct RNA-RNA and RNA-protein interactions, and in the correct function of mature RNAs. The RNA encoded by this gene is thought to mediate the pseudouridylation of residue U1664 of 28S rRNA. [provided by RefSeq, Feb 2009]

RNU5B-2P Gene

RNA, U5B small nuclear 2, pseudogene

RNU5E-3P Gene

RNA, U5E small nuclear 3, pseudogene

RNU7-50P Gene

RNA, U7 small nuclear 50 pseudogene

RNU5A-6P Gene

RNA, U5A small nuclear 6, pseudogene

SCARNA6 Gene

small Cajal body-specific RNA 6

RNU5E-10P Gene

RNA, U5E small nuclear 10, pseudogene

SNORD116-19 Gene

small nucleolar RNA, C/D box 116-19

SNORD116-18 Gene

small nucleolar RNA, C/D box 116-18

SNORD116-11 Gene

small nucleolar RNA, C/D box 116-11

SNORD116-13 Gene

small nucleolar RNA, C/D box 116-13

SNORD116-15 Gene

small nucleolar RNA, C/D box 116-15

SNORD116-14 Gene

small nucleolar RNA, C/D box 116-14

SNORD116-17 Gene

small nucleolar RNA, C/D box 116-17

SNORD116-16 Gene

small nucleolar RNA, C/D box 116-16

RNU7-29P Gene

RNA, U7 small nuclear 29 pseudogene

SNORD59B Gene

small nucleolar RNA, C/D box 59B

SNORD59A Gene

small nucleolar RNA, C/D box 59A

SNRPBP1 Gene

small nuclear ribonucleoprotein polypeptides B and B1 pseudogene 1

LOC100128056 Gene

CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 pseudogene

SNORD72 Gene

small nucleolar RNA, C/D box 72

SNORD77 Gene

small nucleolar RNA, C/D box 77

SNORD74 Gene

small nucleolar RNA, C/D box 74

SNORD75 Gene

small nucleolar RNA, C/D box 75

SNORD78 Gene

small nucleolar RNA, C/D box 78

SNORD79 Gene

small nucleolar RNA, C/D box 79

RNU7-79P Gene

RNA, U7 small nuclear 79 pseudogene

RNU6-28P Gene

RNA, U6 small nuclear 28, pseudogene

SNRPFP3 Gene

small nuclear ribonucleoprotein polypeptide F pseudogene 3

RNU2-5P Gene

RNA, U2 small nuclear 5, pseudogene

SNORD56 Gene

small nucleolar RNA, C/D box 56

SNORD113-8 Gene

small nucleolar RNA, C/D box 113-8

SNORD113-9 Gene

small nucleolar RNA, C/D box 113-9

SNORD113-4 Gene

small nucleolar RNA, C/D box 113-4

SNORD113-5 Gene

small nucleolar RNA, C/D box 113-5

SNORD113-6 Gene

small nucleolar RNA, C/D box 113-6

SNORD113-7 Gene

small nucleolar RNA, C/D box 113-7

SNORD113-2 Gene

small nucleolar RNA, C/D box 113-2

SNORD96B Gene

small nucleolar RNA, C/D box 96B

SNORD96A Gene

small nucleolar RNA, C/D box 96A

RNU5F-3P Gene

RNA, U5F small nuclear 3, pseudogene

SNORD38B Gene

small nucleolar RNA, C/D box 38B

SNORD38A Gene

small nucleolar RNA, C/D box 38A

LSM10 Gene

LSM10, U7 small nuclear RNA associated

LSM11 Gene

LSM11, U7 small nuclear RNA associated

RNU7-48P Gene

RNA, U7 small nuclear 48 pseudogene

SNORD115-34 Gene

small nucleolar RNA, C/D box 115-34

SNORD115-35 Gene

small nucleolar RNA, C/D box 115-35

SNORD115-32 Gene

small nucleolar RNA, C/D box 115-32

SNORD115-38 Gene

small nucleolar RNA, C/D box 115-38

SNORD115-39 Gene

small nucleolar RNA, C/D box 115-39

SNHG20 Gene

small nucleolar RNA host gene 20

SNHG21 Gene

small nucleolar RNA host gene 21

SNHG22 Gene

small nucleolar RNA host gene 22

SNHG23 Gene

small nucleolar RNA host gene 23

SNHG24 Gene

small nucleolar RNA host gene 24

RNU6-42P Gene

RNA, U6 small nuclear 42, pseudogene

SNORD115@ Gene

small nucleolar RNA, C/D box 115 cluster

SNORA59A Gene

small nucleolar RNA, H/ACA box 59A

SNORA59B Gene

small nucleolar RNA, H/ACA box 59B

LOC728825 Gene

small ubiquitin-like modifier 2

RNU7-21P Gene

RNA, U7 small nuclear 21 pseudogene

SNORD71 Gene

small nucleolar RNA, C/D box 71

SNORD76 Gene

small nucleolar RNA, C/D box 76

SNORA11C Gene

small nucleolar RNA, H/ACA box 11C

SNORA11B Gene

small nucleolar RNA, H/ACA box 11B

SNRNP35 Gene

small nuclear ribonucleoprotein 35kDa (U11/U12)

The protein encoded by this gene is a homolog of the U1-snRNP binding protein. The N-terminal half contains a RNA recognition motif and the C-terminal half is rich in Arg/Asp and Arg/Glu dipeptides, which is a characteristic of a variety of splicing factors. This protein is a component of the U11/U12 small nuclear ribonucleoproteins (snRNP) that form part of the U12-type spliceosome. Alternative splicing results in multiple transcript variants encoding two distinct isoforms and representing a non-protein coding variant. [provided by RefSeq, Aug 2013]

SMPX Gene

small muscle protein, X-linked

This gene encodes a small protein that has no known functional domains. Mutations in this gene are a cause of X-linked deafness-4, and the encoded protein may play a role in the maintenance of inner ear cells subjected to mechanical stress. Alternatively spliced transcript variants have been observed for this gene. [provided by RefSeq, Dec 2011]

RNU7-3P Gene

RNA, U7 small nuclear 3 pseudogene

SNORD6 Gene

small nucleolar RNA, C/D box 6

SNORD7 Gene

small nucleolar RNA, C/D box 7

This gene encodes a spliceosomal small nuclear RNA that has orthologs in S. pombe and D. melanogaster. In S. pombe, this gene is required for site-specific 2'-O-methylation of U6 snRNA at position A41. While this is not an essential gene for S. pombe growth, loss of this gene's function may result in a slight decrease in mRNA splicing efficiency. [provided by RefSeq, Oct 2008]

SNORD5 Gene

small nucleolar RNA, C/D box 5

SNORD2 Gene

small nucleolar RNA, C/D box 2

SNORD8 Gene

small nucleolar RNA, C/D box 8

SNORD9 Gene

small nucleolar RNA, C/D box 9

ASH2L Gene

ash2 (absent, small, or homeotic)-like (Drosophila)

RNU7-2P Gene

RNA, U7 small nuclear 2 pseudogene

RNU2-7P Gene

RNA, U2 small nuclear 7, pseudogene

SMLR1 Gene

small leucine-rich protein 1

SNORD114-8 Gene

small nucleolar RNA, C/D box 114-8

SPRR2E Gene

small proline-rich protein 2E

This gene encodes a member of a family of small proline-rich proteins clustered in the epidermal differentiation complex on chromosome 1q21. The encoded protein, along with other family members, is a component of the cornified cell envelope that forms beneath the plasma membrane in terminally differentiated stratified squamous epithelia. This envelope serves as a barrier against extracellular and environmental factors. The seven SPRR2 genes (A-G) appear to have been homogenized by gene conversion compared to others in the cluster that exhibit greater differences in protein structure. [provided by RefSeq, Feb 2014]

SPRR2D Gene

small proline-rich protein 2D

SPRR2G Gene

small proline-rich protein 2G

SPRR2F Gene

small proline-rich protein 2F

SPRR2A Gene

small proline-rich protein 2A

SPRR2C Gene

small proline-rich protein 2C (pseudogene)

SPRR2B Gene

small proline-rich protein 2B

RNU6-33P Gene

RNA, U6 small nuclear 33, pseudogene

LSM3 Gene

LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)

Sm-like proteins were identified in a variety of organisms based on sequence homology with the Sm protein family (see SNRPD2; MIM 601061). Sm-like proteins contain the Sm sequence motif, which consists of 2 regions separated by a linker of variable length that folds as a loop. The Sm-like proteins are thought to form a stable heteromer present in tri-snRNP particles, which are important for pre-mRNA splicing.[supplied by OMIM, Apr 2004]

SUMO3 Gene

small ubiquitin-like modifier 3

This gene encodes a member of the small ubiquitin-related modifier (SUMO) family of eukaryotic proteins. The encoded protein is covalently conjugated to other proteins via a post-translation modification known as sumoylation. Sumoylation may play a role in a wide variety of cellular processes, including nuclear transport, DNA replication and repair, mitosis, transcriptional regulation, and signal transduction. Alternatively spliced transcript variants encoding distinct proteins have been described. [provided by RefSeq, Feb 2014]

RNU7-67P Gene

RNA, U7 small nuclear 67 pseudogene

CTDSPL2 Gene

CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2

SNORD103B Gene

small nucleolar RNA, C/D box 103B

SNORD103A Gene

small nucleolar RNA, C/D box 103A

SNORD114-9 Gene

small nucleolar RNA, C/D box 114-9

SNORD114-3 Gene

small nucleolar RNA, C/D box 114-3

SNORD114-2 Gene

small nucleolar RNA, C/D box 114-2

SNORD114-7 Gene

small nucleolar RNA, C/D box 114-7

SNORD114-19 Gene

small nucleolar RNA, C/D box 114-19

SNORD114-18 Gene

small nucleolar RNA, C/D box 114-18

SNORD114-13 Gene

small nucleolar RNA, C/D box 114-13

SNORD114-12 Gene

small nucleolar RNA, C/D box 114-12

SNORD114-11 Gene

small nucleolar RNA, C/D box 114-11

SNORD114-10 Gene

small nucleolar RNA, C/D box 114-10

SNORD114-17 Gene

small nucleolar RNA, C/D box 114-17

SNORD114-16 Gene

small nucleolar RNA, C/D box 114-16

SNORD114-15 Gene

small nucleolar RNA, C/D box 114-15

RNU7-83P Gene

RNA, U7 small nuclear 83 pseudogene

SNAR-A13 Gene

small ILF3/NF90-associated RNA A13

RNU7-16P Gene

RNA, U7 small nuclear 16 pseudogene

small intestine neoplasm Gene Set

From DISEASES Text-mining Gene-Disease Assocation Evidence Scores

genes co-occuring with the disease small intestine neoplasm in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

small intestine neoplasm Gene Set

From GWASdb SNP-Disease Associations

genes associated with the disease small intestine neoplasm in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset.

[Mpa1 <small>Dsmall>-Tyr(Et)2 <small>Dsmall>-Tic7 <small>Dsmall>-Tic9]OT Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the [Mpa1 <small>Dsmall>-Tyr(Et)2 <small>Dsmall>-Tic7 <small>Dsmall>-Tic9]OT ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

N-methyl-Phe-Lys-Pro-<small>Dsmall>-Cha-Cha-<small>Dsmall>-Arg-CO2H Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the N-methyl-Phe-Lys-Pro-<small>Dsmall>-Cha-Cha-<small>Dsmall>-Arg-CO2H ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

[Mpa1 <small>Dsmall>-Tyr(Et)2 <small>Dsmall>-Tic7]OT Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the [Mpa1 <small>Dsmall>-Tyr(Et)2 <small>Dsmall>-Tic7]OT ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

[Mpa1 <small>Dsmall>-Tyr(Et)2 <small>Dsmall>-Tic7 Aib9]OT Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the [Mpa1 <small>Dsmall>-Tyr(Et)2 <small>Dsmall>-Tic7 Aib9]OT ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

N-methyl-Phe-Lys-Pro-<small>Dsmall>-Cha-Trp-<small>Dsmall>-Arg-CO2H Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the N-methyl-Phe-Lys-Pro-<small>Dsmall>-Cha-Trp-<small>Dsmall>-Arg-CO2H ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

breast neoplasms; colonic neoplasms; esophageal neoplasms; lung neoplasms; prostatic neoplasms; skin neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; colonic neoplasms; esophageal neoplasms; lung neoplasms; prostatic neoplasms; skin neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; head and neck neoplasms; mammary neoplasms; neoplasms; neoplasms, prostatic; prostatic neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; head and neck neoplasms; mammary neoplasms; neoplasms; neoplasms, prostatic; prostatic neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; chromosome breakage; colorectal neoplasms; genital neoplasms, female; mammary neoplasms; neoplasms; nijmegen breakage syndrome; stomach neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; chromosome breakage; colorectal neoplasms; genital neoplasms, female; mammary neoplasms; neoplasms; nijmegen breakage syndrome; stomach neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; cardiovascular diseases; genital neoplasms, female; hip fractures; mammary neoplasms; neoplasms; neoplasms, prostatic; prostatic neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; cardiovascular diseases; genital neoplasms, female; hip fractures; mammary neoplasms; neoplasms; neoplasms, prostatic; prostatic neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

carcinoma, non-small-cell lung; lung neoplasms; neoplasm of lung ; radiation pneumonitis; small cell carcinoma of lung; small cell lung carcinoma Gene Set

From GAD Gene-Disease Associations

genes associated with the disease carcinoma, non-small-cell lung; lung neoplasms; neoplasm of lung ; radiation pneumonitis; small cell carcinoma of lung; small cell lung carcinoma in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

carcinoma, non-small-cell lung; diarrhea; exanthema; head and neck neoplasms; lung neoplasms; neoplasms, squamous cell; ovarian neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease carcinoma, non-small-cell lung; diarrhea; exanthema; head and neck neoplasms; lung neoplasms; neoplasms, squamous cell; ovarian neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

small intestine neuroendocrine neoplasm Gene Set

From DISEASES Text-mining Gene-Disease Assocation Evidence Scores

genes co-occuring with the disease small intestine neuroendocrine neoplasm in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

neoplasm of the small intestine Gene Set

From HPO Gene-Disease Associations

genes associated with the neoplasm of the small intestine phenotype by mapping known disease genes to disease phenotypes from the HPO Gene-Disease Associations dataset.

colorectal neoplasms; esophageal neoplasms; head and neck neoplasms; lung neoplasms; neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease colorectal neoplasms; esophageal neoplasms; head and neck neoplasms; lung neoplasms; neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

carcinoma, squamous cell; gingival neoplasms; mandibular neoplasms; maxillary neoplasms; mouth neoplasms; tongue neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease carcinoma, squamous cell; gingival neoplasms; mandibular neoplasms; maxillary neoplasms; mouth neoplasms; tongue neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

esophageal neoplasms; head and neck neoplasms; laryngeal neoplasms; mouth neoplasms; pharyngeal neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease esophageal neoplasms; head and neck neoplasms; laryngeal neoplasms; mouth neoplasms; pharyngeal neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; carcinoma; carcinoma, large cell; colorectal neoplasms; leukemia, lymphoid; lung neoplasms; neoplasms; stomach neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; carcinoma; carcinoma, large cell; colorectal neoplasms; leukemia, lymphoid; lung neoplasms; neoplasms; stomach neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; colorectal neoplasms; lung neoplasms; neoplasms; prostatic neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; colorectal neoplasms; lung neoplasms; neoplasms; prostatic neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

cachexia; carcinoma, non-small-cell lung; gastrointestinal neoplasms; lung neoplasms; neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease cachexia; carcinoma, non-small-cell lung; gastrointestinal neoplasms; lung neoplasms; neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

small intestine cancer Gene Set

From DISEASES Experimental Gene-Disease Assocation Evidence Scores

genes associated with the disease small intestine cancer in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores dataset.

small intestine carcinoma Gene Set

From DISEASES Text-mining Gene-Disease Assocation Evidence Scores

genes co-occuring with the disease small intestine carcinoma in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

small intestine leiomyoma Gene Set

From DISEASES Text-mining Gene-Disease Assocation Evidence Scores

genes co-occuring with the disease small intestine leiomyoma in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

small intestine leiomyosarcoma Gene Set

From DISEASES Text-mining Gene-Disease Assocation Evidence Scores

genes co-occuring with the disease small intestine leiomyosarcoma in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

small intestine lymphoma Gene Set

From DISEASES Text-mining Gene-Disease Assocation Evidence Scores

genes co-occuring with the disease small intestine lymphoma in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

small intestine adenocarcinoma Gene Set

From DISEASES Text-mining Gene-Disease Assocation Evidence Scores

genes co-occuring with the disease small intestine adenocarcinoma in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

small intestine cancer Gene Set

From DISEASES Text-mining Gene-Disease Assocation Evidence Scores

genes co-occuring with the disease small intestine cancer in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

PLAGL2_deficiency_GDS3010_139_mouse_embryonic small intestine Gene Set

From GEO Signatures of Differentially Expressed Genes for Gene Perturbations

genes differentially expressed following the PLAGL2_deficiency_GDS3010_139_mouse_embryonic small intestine gene perturbation from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.

PDX1_KO_GDS4348_360_mouse_Proximal small intestine Gene Set

From GEO Signatures of Differentially Expressed Genes for Gene Perturbations

genes differentially expressed following the PDX1_KO_GDS4348_360_mouse_Proximal small intestine gene perturbation from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.

small intestine Gene Set

From GTEx Tissue Gene Expression Profiles

genes with high or low expression in small intestine relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.

abnormality of the small intestine Gene Set

From GWASdb SNP-Phenotype Associations

genes associated with the abnormality of the small intestine phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

small intestine Gene Set

From HPA Tissue Gene Expression Profiles

genes with high or low expression in small intestine relative to other tissues from the HPA Tissue Gene Expression Profiles dataset.

small intestine Gene Set

From HPA Tissue Protein Expression Profiles

proteins with high or low expression in small intestine relative to other tissues from the HPA Tissue Protein Expression Profiles dataset.

small intestine carcinoid Gene Set

From HPO Gene-Disease Associations

genes associated with the small intestine carcinoid phenotype by mapping known disease genes to disease phenotypes from the HPO Gene-Disease Associations dataset.

abnormality of the small intestine Gene Set

From HPO Gene-Disease Associations

genes associated with the abnormality of the small intestine phenotype by mapping known disease genes to disease phenotypes from the HPO Gene-Disease Associations dataset.

abnormal small intestine crypts of lieberkuhn morphology Gene Set

From MPO Gene-Phenotype Associations

gene mutations causing the abnormal small intestine crypts of lieberkuhn morphology phenotype in transgenic mice from the MPO Gene-Phenotype Associations dataset.

increased small intestine adenocarcinoma incidence Gene Set

From MPO Gene-Phenotype Associations

gene mutations causing the increased small intestine adenocarcinoma incidence phenotype in transgenic mice from the MPO Gene-Phenotype Associations dataset.

abnormal small intestine placement Gene Set

From MPO Gene-Phenotype Associations

gene mutations causing the abnormal small intestine placement phenotype in transgenic mice from the MPO Gene-Phenotype Associations dataset.

abnormal small intestine morphology Gene Set

From MPO Gene-Phenotype Associations

gene mutations causing the abnormal small intestine morphology phenotype in transgenic mice from the MPO Gene-Phenotype Associations dataset.

small intestine mucosa Gene Set

From TISSUES Curated Tissue Protein Expression Evidence Scores

proteins highly expressed in the tissue small intestine mucosa from the TISSUES Curated Tissue Protein Expression Evidence Scores dataset.

small intestine Gene Set

From TISSUES Curated Tissue Protein Expression Evidence Scores

proteins highly expressed in the tissue small intestine from the TISSUES Curated Tissue Protein Expression Evidence Scores dataset.

small intestine Gene Set

From TISSUES Experimental Tissue Protein Expression Evidence Scores

proteins highly expressed in the tissue small intestine in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores dataset.

small intestine cell line Gene Set

From TISSUES Text-mining Tissue Protein Expression Evidence Scores

proteins co-occuring with the tissue small intestine cell line in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

small intestine mucosa Gene Set

From TISSUES Text-mining Tissue Protein Expression Evidence Scores

proteins co-occuring with the tissue small intestine mucosa in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

small intestine Gene Set

From TISSUES Text-mining Tissue Protein Expression Evidence Scores

proteins co-occuring with the tissue small intestine in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

small intestine epithelium Gene Set

From TISSUES Text-mining Tissue Protein Expression Evidence Scores

proteins co-occuring with the tissue small intestine epithelium in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

adenocarcinoma; carcinoma, small cell; carcinoma, squamous cell; lung neoplasms; neoplasm of lung ; small cell carcinoma of lung; squamous cell carcinoma Gene Set

From GAD Gene-Disease Associations

genes associated with the disease adenocarcinoma; carcinoma, small cell; carcinoma, squamous cell; lung neoplasms; neoplasm of lung ; small cell carcinoma of lung; squamous cell carcinoma in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

adenocarcinoma; carcinoma, large cell; carcinoma, small cell; carcinoma, squamous cell; lung neoplasms; neoplasm of lung ; small cell carcinoma of lung; squamous cell carcinoma Gene Set

From GAD Gene-Disease Associations

genes associated with the disease adenocarcinoma; carcinoma, large cell; carcinoma, small cell; carcinoma, squamous cell; lung neoplasms; neoplasm of lung ; small cell carcinoma of lung; squamous cell carcinoma in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

colorectal neoplasms; colorectal neoplasms, hereditary nonpolyposis; genital neoplasms, female; neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease colorectal neoplasms; colorectal neoplasms, hereditary nonpolyposis; genital neoplasms, female; neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

head and neck neoplasms; kidney neoplasms; lung neoplasms; neoplasms; obesity Gene Set

From GAD Gene-Disease Associations

genes associated with the disease head and neck neoplasms; kidney neoplasms; lung neoplasms; neoplasms; obesity in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; carcinoma; melanoma; neoplastic syndromes, hereditary; ovarian neoplasms; pancreatic neoplasms; prostatic neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; carcinoma; melanoma; neoplastic syndromes, hereditary; ovarian neoplasms; pancreatic neoplasms; prostatic neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

adenocarcinoma; colorectal neoplasms; esophageal neoplasms; lung neoplasms; nasopharyngeal neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease adenocarcinoma; colorectal neoplasms; esophageal neoplasms; lung neoplasms; nasopharyngeal neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; colorectal neoplasms; colorectal neoplasms, hereditary nonpolyposis; endometrial neoplasms; Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; colorectal neoplasms; colorectal neoplasms, hereditary nonpolyposis; endometrial neoplasms; in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

carcinoma, squamous cell; gingival neoplasms; mandibular neoplasms; mouth neoplasms; squamous cell carcinoma; tongue neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease carcinoma, squamous cell; gingival neoplasms; mandibular neoplasms; mouth neoplasms; squamous cell carcinoma; tongue neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

colorectal neoplasms, hereditary nonpolyposis; hereditary nonpolyposis colorectal neoplasms; neoplasms, second primary; rectal neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease colorectal neoplasms, hereditary nonpolyposis; hereditary nonpolyposis colorectal neoplasms; neoplasms, second primary; rectal neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

infertility, male; neoplasms, prostatic; neoplasms, testis; prostatic neoplasms; testicular neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease infertility, male; neoplasms, prostatic; neoplasms, testis; prostatic neoplasms; testicular neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; colorectal neoplasms; neoplasms; prostatic neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; colorectal neoplasms; neoplasms; prostatic neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; mammary neoplasms; neoplasms, prostatic; prostatic neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; mammary neoplasms; neoplasms, prostatic; prostatic neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; colonic neoplasms; neoplasms; prostatic neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; colonic neoplasms; neoplasms; prostatic neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

adrenal gland neoplasms; carcinoma, renal cell; cerebellar neoplasms; hemangioblastoma; kidney neoplasms; pheochromocytoma; retinal neoplasms; von hippel-lindau disease Gene Set

From GAD Gene-Disease Associations

genes associated with the disease adrenal gland neoplasms; carcinoma, renal cell; cerebellar neoplasms; hemangioblastoma; kidney neoplasms; pheochromocytoma; retinal neoplasms; von hippel-lindau disease in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

neoplasm of the large intestine Gene Set

From GWASdb SNP-Phenotype Associations

genes associated with the neoplasm of the large intestine phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

neoplasm of the large intestine Gene Set

From HPO Gene-Disease Associations

genes associated with the neoplasm of the large intestine phenotype by mapping known disease genes to disease phenotypes from the HPO Gene-Disease Associations dataset.

adenocarcinoma; carcinoma, small cell; carcinoma, squamous cell; head and neck neoplasms; lung neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease adenocarcinoma; carcinoma, small cell; carcinoma, squamous cell; head and neck neoplasms; lung neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

carcinoma, non-small-cell lung; lung neoplasms; neoplasm metastasis; neoplasm of lung Gene Set

From GAD Gene-Disease Associations

genes associated with the disease carcinoma, non-small-cell lung; lung neoplasms; neoplasm metastasis; neoplasm of lung in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

adenocarcinoma; carcinoma, non-small-cell lung; esophageal neoplasms; lung neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease adenocarcinoma; carcinoma, non-small-cell lung; esophageal neoplasms; lung neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

paraneoplastic syndromes, nervous system; small cell carcinoma of lung; small cell lung carcinoma Gene Set

From GAD Gene-Disease Associations

genes associated with the disease paraneoplastic syndromes, nervous system; small cell carcinoma of lung; small cell lung carcinoma in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

d(CH2)5[<small>Dsmall>-Ile2 Val4 Tyr-NH29]AVP Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the d(CH2)5[<small>Dsmall>-Ile2 Val4 Tyr-NH29]AVP ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

d[<small>Dsmall>-Phe2]AVP Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the d[<small>Dsmall>-Phe2]AVP ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

[125I]d(CH2)5[<small>Dsmall>-Ile2 Ile4 Tyr-NH29]AVP Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the [125I]d(CH2)5[<small>Dsmall>-Ile2 Ile4 Tyr-NH29]AVP ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

[Phaa1 <small>Dsmall>-Tyr2 Val4 Arg6 Arg-NH29]AVP Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the [Phaa1 <small>Dsmall>-Tyr2 Val4 Arg6 Arg-NH29]AVP ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

[<small>Dsmall>-Bpa5 Ile13]motilin (human) Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the [<small>Dsmall>-Bpa5 Ile13]motilin (human) ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

[tBaa1 <small>Dsmall>-Tyr(Et)2 Val4 Lys6 Arg-NH28 des-Gly9]AVP Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the [tBaa1 <small>Dsmall>-Tyr(Et)2 Val4 Lys6 Arg-NH28 des-Gly9]AVP ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

d(CH2)5[<small>Dsmall>-Ile2 Ile4 Tyr-NH29]AVP Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the d(CH2)5[<small>Dsmall>-Ile2 Ile4 Tyr-NH29]AVP ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

d(CH2)5[<small>Dsmall>-Ile2 Ile4 Ala-NH29]AVP Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the d(CH2)5[<small>Dsmall>-Ile2 Ile4 Ala-NH29]AVP ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

[His5 <small>Dsmall>-Tyr6]GnRH Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the [His5 <small>Dsmall>-Tyr6]GnRH ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

[125I]d(CH2)5[<small>Dsmall>-Tyr(Et)2 Val4 Tyr-NH29]AVP Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the [125I]d(CH2)5[<small>Dsmall>-Tyr(Et)2 Val4 Tyr-NH29]AVP ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

d(CH2)5[<small>Dsmall>-Ile2 Ile4]AVP Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the d(CH2)5[<small>Dsmall>-Ile2 Ile4]AVP ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

[<small>Lsmall>-Bpa5 Ile13]motilin (human) Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the [<small>Lsmall>-Bpa5 Ile13]motilin (human) ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

[des-Gly10 <small>Dsmall>-Ala6]GnRH N-ethylamide Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the [des-Gly10 <small>Dsmall>-Ala6]GnRH N-ethylamide ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

[Phaa1 <small>Dsmall>-Tyr(Et)2 Val4 Lys6 Tyr-NH28 des-Gly9]AVP Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the [Phaa1 <small>Dsmall>-Tyr(Et)2 Val4 Lys6 Tyr-NH28 des-Gly9]AVP ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

[Sar <small>Dsmall>-Phe8 des-Arg9]bradykinin Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the [Sar <small>Dsmall>-Phe8 des-Arg9]bradykinin ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

d[<small>Dsmall>-Pal2]AVP Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the d[<small>Dsmall>-Pal2]AVP ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

d(CH2)5[<small>Dsmall>-Tyr(Et)2 Val4 Tyr-NH29]AVP Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the d(CH2)5[<small>Dsmall>-Tyr(Et)2 Val4 Tyr-NH29]AVP ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

d(CH2)5[<small>Dsmall>-Ile2 Ile4 Ala-NH2]AVP Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the d(CH2)5[<small>Dsmall>-Ile2 Ile4 Ala-NH2]AVP ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

[Phaa1 <small>Dsmall>-Tyr(Me)2 Arg6 Tyr-NH29]AVP Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the [Phaa1 <small>Dsmall>-Tyr(Me)2 Arg6 Tyr-NH29]AVP ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

[125I]d(CH2)5[<small>Dsmall>-Tyr(Et)2 Ile4 Tyr-NH29]AVP Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the [125I]d(CH2)5[<small>Dsmall>-Tyr(Et)2 Ile4 Tyr-NH29]AVP ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

[<small>Dsmall>-Lys1 des-Arg10]kallidin Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the [<small>Dsmall>-Lys1 des-Arg10]kallidin ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

[125I]d(CH2)5[<small>Dsmall>-Ile2 Val4 Tyr-NH29]AVP Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the [125I]d(CH2)5[<small>Dsmall>-Ile2 Val4 Tyr-NH29]AVP ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

<small>Dsmall>-Lys0-[des-Arg10]kallidin Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the <small>Dsmall>-Lys0-[des-Arg10]kallidin ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

[Phaa1 <small>Dsmall>-Tyr(Et)2 Lys6 des-Gly9]AVP Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the [Phaa1 <small>Dsmall>-Tyr(Et)2 Lys6 des-Gly9]AVP ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

[125I][des-Gly10 <small>Dsmall>-Ala6]GnRH N-ethylamide Gene Set

From Guide to Pharmacology Chemical Ligands of Receptors

receptors of the [125I][des-Gly10 <small>Dsmall>-Ala6]GnRH N-ethylamide ligand (chemical) from the curated Guide to Pharmacology Chemical Ligands of Receptors dataset.

U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B'' Gene Set

From InterPro Predicted Protein Domain Annotations

proteins predicted to have the U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B'' protein domain from the InterPro Predicted Protein Domain Annotations dataset.

non-small cell large cell lung carcinoma; non-small cell squamous cell lung carcinoma Gene Set

From PhosphoSitePlus Phosphosite-Disease Associations

proteins associated with the disease non-small cell large cell lung carcinoma; non-small cell squamous cell lung carcinoma from the curated PhosphoSitePlus Phosphosite-Disease Associations dataset.

colorectal neoplasms, hereditary nonpolyposis; hereditary nonpolyposis colorectal neoplasms; neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease colorectal neoplasms, hereditary nonpolyposis; hereditary nonpolyposis colorectal neoplasms; neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

chromosome aberrations; chromosome abnormality; neoplasms, germ cell and embryonal; neoplasms, testis; testicular neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease chromosome aberrations; chromosome abnormality; neoplasms, germ cell and embryonal; neoplasms, testis; testicular neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

colonic neoplasms; colorectal neoplasms; microsatellite instability; rectal neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease colonic neoplasms; colorectal neoplasms; microsatellite instability; rectal neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; cell transformation, neoplastic; heart diseases; mammary neoplasms; neoplasms, experimental Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; cell transformation, neoplastic; heart diseases; mammary neoplasms; neoplasms, experimental in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; carcinoma, ductal, breast; invasive ductal breast carcinoma; lymphatic metastasis; mammary neoplasms; neoplasm invasiveness; neoplasm metastasis; neoplasm recurrence, local Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; carcinoma, ductal, breast; invasive ductal breast carcinoma; lymphatic metastasis; mammary neoplasms; neoplasm invasiveness; neoplasm metastasis; neoplasm recurrence, local in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

colorectal neoplasms; disease susceptibility; gastrointestinal neoplasms; stomach neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease colorectal neoplasms; disease susceptibility; gastrointestinal neoplasms; stomach neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; breast neoplasms, male; mammary neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; breast neoplasms, male; mammary neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

gastrointestinal stromal tumors; liver neoplasms; lung neoplasms; neoplasm recurrence, local; neoplasm seeding; neoplasm, residual; splenic neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease gastrointestinal stromal tumors; liver neoplasms; lung neoplasms; neoplasm recurrence, local; neoplasm seeding; neoplasm, residual; splenic neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

colorectal neoplasms, hereditary nonpolyposis; endometrial neoplasms; hereditary nonpolyposis colorectal neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease colorectal neoplasms, hereditary nonpolyposis; endometrial neoplasms; hereditary nonpolyposis colorectal neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

adenocarcinoma; carcinoma; hematologic neoplasms; hemochromatosis; myeloproliferative disorders; neoplasms; neoplasms, multiple primary Gene Set

From GAD Gene-Disease Associations

genes associated with the disease adenocarcinoma; carcinoma; hematologic neoplasms; hemochromatosis; myeloproliferative disorders; neoplasms; neoplasms, multiple primary in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

adenocarcinoma; carcinoma, renal cell; endometrial neoplasms; kidney neoplasms; neoplasms; renal cell carcinoma Gene Set

From GAD Gene-Disease Associations

genes associated with the disease adenocarcinoma; carcinoma, renal cell; endometrial neoplasms; kidney neoplasms; neoplasms; renal cell carcinoma in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

colorectal neoplasms; neoplasms; stomach neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease colorectal neoplasms; neoplasms; stomach neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

colonic neoplasms; lung neoplasms; nervous system neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease colonic neoplasms; lung neoplasms; nervous system neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; colorectal neoplasms; mammary neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; colorectal neoplasms; mammary neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

bladder neoplasm; esophageal neoplasms; leiomyoma; lung neoplasms; neoplasm of lung ; oesophageal neoplasm; urinary bladder neoplasms; uterine neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease bladder neoplasm; esophageal neoplasms; leiomyoma; lung neoplasms; neoplasm of lung ; oesophageal neoplasm; urinary bladder neoplasms; uterine neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

esophageal neoplasms; head and neck neoplasms; respiratory tract neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease esophageal neoplasms; head and neck neoplasms; respiratory tract neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; hematologic neoplasms; hemochromatosis; hepatic veno-occlusive disease; mammary neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; hematologic neoplasms; hemochromatosis; hepatic veno-occlusive disease; mammary neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; neoplasms, germ cell and embryonal; ovarian neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; neoplasms, germ cell and embryonal; ovarian neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

neoplasms, germ cell and embryonal; neoplasms, testis; testicular neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease neoplasms, germ cell and embryonal; neoplasms, testis; testicular neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; neoplasms, hormone-dependent; prostatic neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; neoplasms, hormone-dependent; prostatic neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; colonic polyps; colorectal neoplasms; mammary neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; colonic polyps; colorectal neoplasms; mammary neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

alcohol-induced disorders; esophageal neoplasms; laryngeal neoplasms; oropharyngeal neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease alcohol-induced disorders; esophageal neoplasms; laryngeal neoplasms; oropharyngeal neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

colorectal neoplasms; colorectal neoplasms, hereditary nonpolyposis; endometrial neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease colorectal neoplasms; colorectal neoplasms, hereditary nonpolyposis; endometrial neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

carcinoma, squamous cell; head and neck neoplasms; neoplasms, multiple primary; respiratory tract neoplasms; squamous cell carcinoma Gene Set

From GAD Gene-Disease Associations

genes associated with the disease carcinoma, squamous cell; head and neck neoplasms; neoplasms, multiple primary; respiratory tract neoplasms; squamous cell carcinoma in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

colonic neoplasms; colorectal neoplasms; rectal neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease colonic neoplasms; colorectal neoplasms; rectal neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; colorectal neoplasms; nasopharyngeal neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; colorectal neoplasms; nasopharyngeal neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

carcinoma, squamous cell; head and neck neoplasms; mouth neoplasms; papillomavirus infections; pharyngeal neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease carcinoma, squamous cell; head and neck neoplasms; mouth neoplasms; papillomavirus infections; pharyngeal neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; neoplasms, multiple primary; ovarian neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; neoplasms, multiple primary; ovarian neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; ovarian neoplasms; pancreatic neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; ovarian neoplasms; pancreatic neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

carcinoma, basal cell; carcinoma, squamous cell; head and neck neoplasms; lip neoplasms; skin neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease carcinoma, basal cell; carcinoma, squamous cell; head and neck neoplasms; lip neoplasms; skin neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

colorectal neoplasms; rectal neoplasms; sigmoid neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease colorectal neoplasms; rectal neoplasms; sigmoid neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

carcinoma, papillary; neoplasm invasiveness; neoplasm metastasis; thyroid neoplasm; thyroid neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease carcinoma, papillary; neoplasm invasiveness; neoplasm metastasis; thyroid neoplasm; thyroid neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

breast neoplasms; mammary neoplasms; neoplasms Gene Set

From GAD Gene-Disease Associations

genes associated with the disease breast neoplasms; mammary neoplasms; neoplasms in GWAS and other genetic association datasets from the GAD Gene-Disease Associations dataset.

large intestine cancer Gene Set

From DISEASES Experimental Gene-Disease Assocation Evidence Scores

genes associated with the disease large intestine cancer in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores dataset.

large intestine cancer Gene Set

From DISEASES Text-mining Gene-Disease Assocation Evidence Scores

genes co-occuring with the disease large intestine cancer in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

large intestine lipoma Gene Set

From DISEASES Text-mining Gene-Disease Assocation Evidence Scores

genes co-occuring with the disease large intestine lipoma in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

acute vascular insufficiency of intestine Gene Set

From DISEASES Text-mining Gene-Disease Assocation Evidence Scores

genes co-occuring with the disease acute vascular insufficiency of intestine in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

intestine Gene Set

From GeneRIF Biological Term Annotations

genes co-occuring with the biological term intestine in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Crohn's disease_Intestine - Large Intestine - Colon (MMHCC)_GSE6731 Gene Set

From GEO Signatures of Differentially Expressed Genes for Diseases

genes differentially expressed during Crohn's disease_Intestine - Large Intestine - Colon (MMHCC)_GSE6731 disease perturbation from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.

Cancer of Colon_Intestine - Large Intestine - Colon (MMHCC)_GSE4107 Gene Set

From GEO Signatures of Differentially Expressed Genes for Diseases

genes differentially expressed during Cancer of Colon_Intestine - Large Intestine - Colon (MMHCC)_GSE4107 disease perturbation from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.

PRKCA_KO_GDS2141_300_mouse_small intestine Gene Set

From GEO Signatures of Differentially Expressed Genes for Gene Perturbations

genes differentially expressed following the PRKCA_KO_GDS2141_300_mouse_small intestine gene perturbation from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.

KLF9_Deficiency_GDS2703_647_mouse_Jejuna - intestine Gene Set

From GEO Signatures of Differentially Expressed Genes for Gene Perturbations

genes differentially expressed following the KLF9_Deficiency_GDS2703_647_mouse_Jejuna - intestine gene perturbation from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.

PPARA_KO_GDS2886_484_mouse_small intestine Gene Set

From GEO Signatures of Differentially Expressed Genes for Gene Perturbations

genes differentially expressed following the PPARA_KO_GDS2886_484_mouse_small intestine gene perturbation from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.

HNF4alpha_KO_GDS1915_173_mouse_Small intestine Gene Set

From GEO Signatures of Differentially Expressed Genes for Gene Perturbations

genes differentially expressed following the HNF4alpha_KO_GDS1915_173_mouse_Small intestine gene perturbation from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.

PPARA_Deficiency_GDS2934_632_mouse_Small intestine Gene Set

From GEO Signatures of Differentially Expressed Genes for Gene Perturbations

genes differentially expressed following the PPARA_Deficiency_GDS2934_632_mouse_Small intestine gene perturbation from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.

intestine smooth muscle contraction Gene Set

From GO Biological Process Annotations

genes participating in the intestine smooth muscle contraction biological process from the curated GO Biological Process Annotations dataset.

determination of intestine left/right asymmetry Gene Set

From GO Biological Process Annotations

genes participating in the determination of intestine left/right asymmetry biological process from the curated GO Biological Process Annotations dataset.

large intestine cancer Gene Set

From GWASdb SNP-Disease Associations

genes associated with the disease large intestine cancer in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset.

abnormality of the intestine Gene Set

From GWASdb SNP-Phenotype Associations

genes associated with the abnormality of the intestine phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

inflammation of the large intestine Gene Set

From GWASdb SNP-Phenotype Associations

genes associated with the inflammation of the large intestine phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

abnormality of the large intestine Gene Set

From GWASdb SNP-Phenotype Associations

genes associated with the abnormality of the large intestine phenotype in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.

abnormality of the intestine Gene Set

From HPO Gene-Disease Associations

genes associated with the abnormality of the intestine phenotype by mapping known disease genes to disease phenotypes from the HPO Gene-Disease Associations dataset.

inflammation of the large intestine Gene Set

From HPO Gene