viral membrane Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The lipid bilayer of a virion, a complete fully infectious extracellular virus particle. (Gene Ontology, GO_0036338)
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Genes

227 proteins co-occuring with the viral membrane cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
ERVW-1 endogenous retrovirus group W, member 1 2.83962
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene) 2.39023
CD4 CD4 molecule 2.37309
GYPC glycophorin C (Gerbich blood group) 1.69829
CD209 CD209 molecule 1.62236
ACKR1 atypical chemokine receptor 1 (Duffy blood group) 1.49888
CD81 CD81 molecule 1.42598
CDSN corneodesmosin 1.3935
ERF Ets2 repressor factor 1.35868
NPTN neuroplastin 1.32221
CLEC4M C-type lectin domain family 4, member M 1.31681
PVRL1 poliovirus receptor-related 1 (herpesvirus entry mediator C) 1.31142
FURIN furin (paired basic amino acid cleaving enzyme) 1.25706
TACSTD2 tumor-associated calcium signal transducer 2 1.25338
TNFRSF14 tumor necrosis factor receptor superfamily, member 14 1.16133
GP2 glycoprotein 2 (zymogen granule membrane) 1.14699
CXCR4 chemokine (C-X-C motif) receptor 4 1.11123
ICAM3 intercellular adhesion molecule 3 1.00202
LMLN leishmanolysin-like (metallopeptidase M8 family) 0.985367
CACNA2D4 calcium channel, voltage-dependent, alpha 2/delta subunit 4 0.980987
ENGASE endo-beta-N-acetylglucosaminidase 0.977104
PDPN podoplanin 0.93596
OXGR1 oxoglutarate (alpha-ketoglutarate) receptor 1 0.935016
CD46 CD46 molecule, complement regulatory protein 0.932658
KNTC1 kinetochore associated 1 0.892556
ZNF17 zinc finger protein 17 0.874567
MOGS mannosyl-oligosaccharide glucosidase 0.855257
FAM20C family with sequence similarity 20, member C 0.83322
PLVAP plasmalemma vesicle associated protein 0.824041
HAS1 hyaluronan synthase 1 0.813028
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 0.810276
PVRL2 poliovirus receptor-related 2 (herpesvirus entry mediator B) 0.809817
BST2 bone marrow stromal cell antigen 2 0.799728
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 0.790106
IFNA1 interferon, alpha 1 0.789649
GPR15 G protein-coupled receptor 15 0.769539
CDR2 cerebellar degeneration-related protein 2, 62kDa 0.728836
PCSK7 proprotein convertase subtilisin/kexin type 7 0.724365
PILRA paired immunoglobin-like type 2 receptor alpha 0.716346
CR2 complement component (3d/Epstein Barr virus) receptor 2 0.713238
SLC52A2 solute carrier family 52 (riboflavin transporter), member 2 0.710136
MAGIX MAGI family member, X-linked 0.705273
CANX calnexin 0.696905
RAF1 Raf-1 proto-oncogene, serine/threonine kinase 0.687701
TMPRSS11A transmembrane protease, serine 11A 0.677673
SIGLEC1 sialic acid binding Ig-like lectin 1, sialoadhesin 0.671593
DEFB104A defensin, beta 104A 0.668559
PCSK6 proprotein convertase subtilisin/kexin type 6 0.653019
EPOR erythropoietin receptor 0.652159
IGHV3-30 immunoglobulin heavy variable 3-30 0.645287
ERVFRD-1 endogenous retrovirus group FRD, member 1 0.642286
CPD carboxypeptidase D 0.604862
SERPINH1 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) 0.593492
HS3ST1 heparan sulfate (glucosamine) 3-O-sulfotransferase 1 0.586361
MST1R macrophage stimulating 1 receptor 0.584686
XPR1 xenotropic and polytropic retrovirus receptor 1 0.577999
TBC1D20 TBC1 domain family, member 20 0.573828
CCL3 chemokine (C-C motif) ligand 3 0.573411
TAPT1 transmembrane anterior posterior transformation 1 0.566338
LPO lactoperoxidase 0.562602
GP5 glycoprotein V (platelet) 0.560943
CCR8 chemokine (C-C motif) receptor 8 0.554732
MBTPS1 membrane-bound transcription factor peptidase, site 1 0.554732
PDE6D phosphodiesterase 6D, cGMP-specific, rod, delta 0.545648
CXCL12 chemokine (C-X-C motif) ligand 12 0.544411
CLEC1B C-type lectin domain family 1, member B 0.543176
HLA-B major histocompatibility complex, class I, B 0.537827
DMBT1 deleted in malignant brain tumors 1 0.510011
CYB5R3 cytochrome b5 reductase 3 0.50879
CWC15 CWC15 spliceosome-associated protein 0.506757
KRAS Kirsten rat sarcoma viral oncogene homolog 0.505537
ACE2 angiotensin I converting enzyme 2 0.49742
GPR62 G protein-coupled receptor 62 0.488519
GPR1 G protein-coupled receptor 1 0.488519
REPS2 RALBP1 associated Eps domain containing 2 0.481661
GLB1 galactosidase, beta 1 0.479647
SCARB1 scavenger receptor class B, member 1 0.472813
MCAT malonyl CoA:ACP acyltransferase (mitochondrial) 0.471208
NPC1 Niemann-Pick disease, type C1 0.470807
SLC25A18 solute carrier family 25 (glutamate carrier), member 18 0.469604
CD79A CD79a molecule, immunoglobulin-associated alpha 0.458803
AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase 0.448054
TSG101 tumor susceptibility 101 0.438542
TNF tumor necrosis factor 0.431829
P4HB prolyl 4-hydroxylase, beta polypeptide 0.429859
FTH1 ferritin, heavy polypeptide 1 0.414164
IL2 interleukin 2 0.41143
SFTPD surfactant protein D 0.405582
GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 0.404804
GPR85 G protein-coupled receptor 85 0.401693
ERV3-1 endogenous retrovirus group 3, member 1 0.399751
CLEC4G C-type lectin domain family 4, member G 0.398975
FTL ferritin, light polypeptide 0.390068
SERPINB3 serpin peptidase inhibitor, clade B (ovalbumin), member 3 0.389682
CLDN1 claudin 1 0.388523
GRN granulin 0.388137
CENPV centromere protein V 0.386208
ICAM1 intercellular adhesion molecule 1 0.385436
LCK LCK proto-oncogene, Src family tyrosine kinase 0.373516
EFNB2 ephrin-B2 0.370833
DOK1 docking protein 1, 62kDa (downstream of tyrosine kinase 1) 0.370067
SHMT1 serine hydroxymethyltransferase 1 (soluble) 0.363185
CD82 CD82 molecule 0.360896
UNC50 unc-50 homolog (C. elegans) 0.359752
CALR calreticulin 0.357086
THY1 Thy-1 cell surface antigen 0.354422
CD34 CD34 molecule 0.353282
CCR3 chemokine (C-C motif) receptor 3 0.349863
SP6 Sp6 transcription factor 0.349863
MX1 MX dynamin-like GTPase 1 0.346829
EPHA5 EPH receptor A5 0.345314
GSTA3 glutathione S-transferase alpha 3 0.344935
GSTA4 glutathione S-transferase alpha 4 0.343421
GSTA2 glutathione S-transferase alpha 2 0.343421
GSTA1 glutathione S-transferase alpha 1 0.341151
INA internexin neuronal intermediate filament protein, alpha 0.336996
TMPRSS2 transmembrane protease, serine 2 0.327205
GPANK1 G patch domain and ankyrin repeats 1 0.326829
PGC progastricsin (pepsinogen C) 0.321575
EPHA1 EPH receptor A1 0.320451
B2M beta-2-microglobulin 0.318205
NRGN neurogranin (protein kinase C substrate, RC3) 0.314091
SH2D3C SH2 domain containing 3C 0.314091
EPHA7 EPH receptor A7 0.312971
PPIA peptidylprolyl isomerase A (cyclophilin A) 0.311105
RAB1A RAB1A, member RAS oncogene family 0.310358
CD63 CD63 molecule 0.308867
DEFB104B defensin, beta 104B 0.300682
IFNE interferon, epsilon 0.300311
SYTL5 synaptotagmin-like 5 0.294748
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.294007
AXL AXL receptor tyrosine kinase 0.290678
MAN1A1 mannosidase, alpha, class 1A, member 1 0.287352
APLNR apelin receptor 0.281821
CPVL carboxypeptidase, vitellogenic-like 0.281453
ANOS1 anosmin 1 0.275569
DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) 0.267139
TMPRSS11D transmembrane protease, serine 11D 0.266408
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.266408
AP3D1 adaptor-related protein complex 3, delta 1 subunit 0.266408
LTA lymphotoxin alpha 0.262755
CD59 CD59 molecule, complement regulatory protein 0.260931
HMP19 HMP19 protein 0.258016
ALB albumin 0.257652
SRC SRC proto-oncogene, non-receptor tyrosine kinase 0.256197
VARS valyl-tRNA synthetase 0.253291
MAST2 microtubule associated serine/threonine kinase 2 0.251839
EPHA3 EPH receptor A3 0.251839
HRC histidine rich calcium binding protein 0.251476
CD38 CD38 molecule 0.249302
PTDSS2 phosphatidylserine synthase 2 0.24713
ITGAL integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide) 0.246407
SGMS1 sphingomyelin synthase 1 0.246046
GH1 growth hormone 1 0.246046
MICB MHC class I polypeptide-related sequence B 0.240276
EPO erythropoietin 0.239557
RPL28 ribosomal protein L28 0.239197
HYAL2 hyaluronoglucosaminidase 2 0.238837
CD53 CD53 molecule 0.234891
TRAM1 translocation associated membrane protein 1 0.233459
CCL4L2 chemokine (C-C motif) ligand 4-like 2 0.232029
EDEM3 ER degradation enhancer, mannosidase alpha-like 3 0.230958
VPS4A vacuolar protein sorting 4 homolog A (S. cerevisiae) 0.229176
LMAN1 lectin, mannose-binding, 1 0.229176
PMEL premelanosome protein 0.227752
CCR4 chemokine (C-C motif) receptor 4 0.227041
NUPR1 nuclear protein, transcriptional regulator, 1 0.225267
CCR1 chemokine (C-C motif) receptor 1 0.224913
TBATA thymus, brain and testes associated 0.221378
CCL4L1 chemokine (C-C motif) ligand 4-like 1 0.220673
SNX16 sorting nexin 16 0.217511
CTSL cathepsin L 0.217511
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked 0.211933
TGOLN2 trans-golgi network protein 2 0.211587
SRSF1 serine/arginine-rich splicing factor 1 0.209858
MGAT4C MGAT4 family, member C 0.209513
GH2 growth hormone 2 0.208137
ANPEP alanyl (membrane) aminopeptidase 0.207108
SDC2 syndecan 2 0.204718
EPHB4 EPH receptor B4 0.204718
ABO ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) 0.203699
HIST1H1C histone cluster 1, H1c 0.200663
IFITM3 interferon induced transmembrane protein 3 0.200328
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.198991
PUS3 pseudouridylate synthase 3 0.196339
PCSK5 proprotein convertase subtilisin/kexin type 5 0.194371
CDR1 cerebellar degeneration-related protein 1, 34kDa 0.19307
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.190495
TRIT1 tRNA isopentenyltransferase 1 0.188905
MBL2 mannose-binding lectin (protein C) 2, soluble 0.186397
IRF6 interferon regulatory factor 6 0.183935
CLDN7 claudin 7 0.182422
CCL3L1 chemokine (C-C motif) ligand 3-like 1 0.182122
PROS1 protein S (alpha) 0.180634
KLK11 kallikrein-related peptidase 11 0.180634
GYPE glycophorin E (MNS blood group) 0.179752
CCL4 chemokine (C-C motif) ligand 4 0.179752
BABAM1 BRISC and BRCA1 A complex member 1 0.178877
SLAMF6 SLAM family member 6 0.178299
PLA2G1B phospholipase A2, group IB (pancreas) 0.177724
ZBTB32 zinc finger and BTB domain containing 32 0.177154
SCAI suppressor of cancer cell invasion 0.17687
WFDC2 WAP four-disulfide core domain 2 0.175745
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.174635
GAS6 growth arrest-specific 6 0.174087
ANXA6 annexin A6 0.17141
TLR7 toll-like receptor 7 0.169859
CD300A CD300a molecule 0.168349
VCP valosin containing protein 0.168101
RSPH1 radial spoke head 1 homolog (Chlamydomonas) 0.167856
IFITM1 interferon induced transmembrane protein 1 0.167366
DEFA5 defensin, alpha 5, Paneth cell-specific 0.166884
LDLR low density lipoprotein receptor 0.166884
CAMKV CaM kinase-like vesicle-associated 0.166167
TFRC transferrin receptor 0.165932
ALKBH1 alkB, alkylation repair homolog 1 (E. coli) 0.16298
DNAH8 dynein, axonemal, heavy chain 8 0.16298
CFP complement factor properdin 0.16298
EPHA2 EPH receptor A2 0.160863
IL2RG interleukin 2 receptor, gamma 0.159462
TMBIM4 transmembrane BAX inhibitor motif containing 4 0.159462
USE1 unconventional SNARE in the ER 1 homolog (S. cerevisiae) 0.159074
DHDH dihydrodiol dehydrogenase (dimeric) 0.136399
NBPF10 neuroblastoma breakpoint family, member 10 0.136322
NBL1 neuroblastoma 1, DAN family BMP antagonist 0.136182
CR1 complement component (3b/4b) receptor 1 (Knops blood group) 0.136151
AMOTL1 angiomotin like 1 0.135814