viral integration complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A nucleoprotein complex containing viral genetic material and associated viral and host proteins, which is capable of inserting a viral genome into a host genome. (Gene Ontology, GO_0019035)
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Genes

134 proteins co-occuring with the viral integration complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
EVI2A ecotropic viral integration site 2A 1.57188
ZNF521 zinc finger protein 521 1.44799
MEIS1 Meis homeobox 1 1.37851
EVI2B ecotropic viral integration site 2B 1.19726
ZNF423 zinc finger protein 423 1.13267
CYP4X1 cytochrome P450, family 4, subfamily X, polypeptide 1 1.09289
PRPF39 pre-mRNA processing factor 39 1.09289
PSIP1 PC4 and SFRS1 interacting protein 1 1.03529
MYB v-myb avian myeloblastosis viral oncogene homolog 1.01337
CRLF1 cytokine receptor-like factor 1 0.97565
GP5 glycoprotein V (platelet) 0.964549
LRMP lymphoid-restricted membrane protein 0.858473
TP53 tumor protein p53 0.858473
EVI5 ecotropic viral integration site 5 0.827254
ELF1 E74-like factor 1 (ets domain transcription factor) 0.820829
TERT telomerase reverse transcriptase 0.814864
EFCAB6 EF-hand calcium binding domain 6 0.786444
PRKRIR protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) 0.768171
MNX1 motor neuron and pancreas homeobox 1 0.758161
PTP4A3 protein tyrosine phosphatase type IVA, member 3 0.755891
KLF4 Kruppel-like factor 4 (gut) 0.747285
CDKN2A cyclin-dependent kinase inhibitor 2A 0.742769
CCDC27 coiled-coil domain containing 27 0.73018
PBX3 pre-B-cell leukemia homeobox 3 0.713682
CD4 CD4 molecule 0.710579
DNAH3 dynein, axonemal, heavy chain 3 0.700863
FHIT fragile histidine triad 0.699103
TRERF1 transcriptional regulating factor 1 0.698223
AHI1 Abelson helper integration site 1 0.690764
IL3 interleukin 3 0.686827
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.676803
HOXA9 homeobox A9 0.669425
HOXD12 homeobox D12 0.634159
MEIS2 Meis homeobox 2 0.624355
MECOM MDS1 and EVI1 complex locus 0.623504
CASZ1 castor zinc finger 1 0.61883
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.609509
NCR2 natural cytotoxicity triggering receptor 2 0.586361
OMG oligodendrocyte myelin glycoprotein 0.575078
PRDM14 PR domain containing 14 0.573411
HOXA11 homeobox A11 0.565508
HRAS Harvey rat sarcoma viral oncogene homolog 0.558457
PBX1 pre-B-cell leukemia homeobox 1 0.557629
STK17B serine/threonine kinase 17b 0.556387
SMAD1 SMAD family member 1 0.555145
TNFAIP2 tumor necrosis factor, alpha-induced protein 2 0.545648
MARS methionyl-tRNA synthetase 0.544
GFI1 growth factor independent 1 transcription repressor 0.540706
LYL1 lymphoblastic leukemia associated hematopoiesis regulator 1 0.536183
EBF1 early B-cell factor 1 0.535772
KMT2B lysine (K)-specific methyltransferase 2B 0.531668
TDP2 tyrosyl-DNA phosphodiesterase 2 0.518981
HMGA1 high mobility group AT-hook 1 0.518165
HOXB13 homeobox B13 0.5149
BCAR3 breast cancer anti-estrogen resistance 3 0.503506
MRVI1 murine retrovirus integration site 1 homolog 0.500664
NF1 neurofibromin 1 0.500664
PTPRG protein tyrosine phosphatase, receptor type, G 0.498231
PID1 phosphotyrosine interaction domain containing 1 0.481258
GP6 glycoprotein VI (platelet) 0.48005
VPS53 vacuolar protein sorting 53 homolog (S. cerevisiae) 0.47844
EMX2 empty spiracles homeobox 2 0.473215
GIN1 gypsy retrotransposon integrase 1 0.470005
SPEN spen family transcriptional repressor 0.457606
TAL1 T-cell acute lymphocytic leukemia 1 0.456809
ZIC1 Zic family member 1 0.455613
PRMT6 protein arginine methyltransferase 6 0.455613
TLX1 T-cell leukemia homeobox 1 0.444085
IRAK2 interleukin-1 receptor-associated kinase 2 0.41143
NRAS neuroblastoma RAS viral (v-ras) oncogene homolog 0.407919
HCLS1 hematopoietic cell-specific Lyn substrate 1 0.407529
CD38 CD38 molecule 0.40714
UBR1 ubiquitin protein ligase E3 component n-recognin 1 0.403248
RERE arginine-glutamic acid dipeptide (RE) repeats 0.397811
FBLIM1 filamin binding LIM protein 1 0.395485
IL16 interleukin 16 0.388523
TET1 tet methylcytosine dioxygenase 1 0.381199
JDP2 Jun dimerization protein 2 0.380045
MED28 mediator complex subunit 28 0.367388
DDB1 damage-specific DNA binding protein 1, 127kDa 0.360515
NTRK2 neurotrophic tyrosine kinase, receptor, type 2 0.357086
SOX2 SRY (sex determining region Y)-box 2 0.352522
PDZK1IP1 PDZK1 interacting protein 1 0.349105
AKR1B1 aldo-keto reductase family 1, member B1 (aldose reductase) 0.348346
FLNC filamin C, gamma 0.347587
MAL mal, T-cell differentiation protein 0.345692
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase 0.338506
CCR5 chemokine (C-C motif) receptor 5 (gene/pseudogene) 0.330589
RAD23A RAD23 homolog A (S. cerevisiae) 0.326078
UNG uracil-DNA glycosylase 0.324201
E2F5 E2F transcription factor 5, p130-binding 0.323075
HOXA10 homeobox A10 0.314091
STIL SCL/TAL1 interrupting locus 0.311105
FANCB Fanconi anemia, complementation group B 0.301054
NFKB2 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) 0.298826
CCNG1 cyclin G1 0.29586
MAPRE2 microtubule-associated protein, RP/EB family, member 2 0.29586
DYNC1I2 dynein, cytoplasmic 1, intermediate chain 2 0.295119
KRAS Kirsten rat sarcoma viral oncogene homolog 0.281821
RB1 retinoblastoma 1 0.276671
TNPO3 transportin 3 0.275936
DHRS9 dehydrogenase/reductase (SDR family) member 9 0.266042
HTN3 histatin 3 0.259837
AHNAK AHNAK nucleoprotein 0.258745
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.256197
GRB7 growth factor receptor-bound protein 7 0.255107
CD33 CD33 molecule 0.247492
CD19 CD19 molecule 0.243519
STIP1 stress-induced phosphoprotein 1 0.240996
CD7 CD7 molecule 0.239916
BRD2 bromodomain containing 2 0.236683
GTF3A general transcription factor IIIA 0.235966
FLI1 Fli-1 proto-oncogene, ETS transcription factor 0.234174
TAT tyrosine aminotransferase 0.233817
IL31RA interleukin 31 receptor A 0.232744
DLX5 distal-less homeobox 5 0.222083
MN1 meningioma (disrupted in balanced translocation) 1 0.218914
LMO2 LIM domain only 2 (rhombotin-like 1) 0.21716
METTL13 methyltransferase like 13 0.21681
ACOT1 acyl-CoA thioesterase 1 0.209858
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.207451
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 0.201335
CCNE1 cyclin E1 0.19733
ERVW-1 endogenous retrovirus group W, member 1 0.189222
IL2RG interleukin 2 receptor, gamma 0.188905
FGF19 fibroblast growth factor 19 0.187646
ANGPTL4 angiopoietin-like 4 0.185469
HOXD9 homeobox D9 0.184547
DKC1 dyskeratosis congenita 1, dyskerin 0.181524
NUP62 nucleoporin 62kDa 0.168349
SIN3A SIN3 transcription regulator family member A 0.164542
FGR FGR proto-oncogene, Src family tyrosine kinase 0.163865
RRM2 ribonucleotide reductase M2 0.16342
COL6A1 collagen, type VI, alpha 1 0.157218