viral assembly compartment Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A membrane-bounded compartment that forms in the cytoplasm of virus-infected cells, in which virus assembly takes place. (Gene Ontology, GO_0072516)
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Genes

27 proteins co-occuring with the viral assembly compartment cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
RAB5C RAB5C, member RAS oncogene family 1.07005
GGPS1 geranylgeranyl diphosphate synthase 1 0.943059
STRBP spermatid perinuclear RNA binding protein 0.916243
CHMP1A charged multivesicular body protein 1A 0.899036
GNS glucosamine (N-acetyl)-6-sulfatase 0.880555
BICD1 bicaudal D homolog 1 (Drosophila) 0.819911
CHMP6 charged multivesicular body protein 6 0.802479
CD9 CD9 molecule 0.734666
CHMP2A charged multivesicular body protein 2A 0.696465
PDSS1 prenyl (decaprenyl) diphosphate synthase, subunit 1 0.682027
CHMP4A charged multivesicular body protein 4A 0.640145
RAB11A RAB11A, member RAS oncogene family 0.578416
DCTN2 dynactin 2 (p50) 0.519389
MX1 MX dynamin-like GTPase 1 0.517756
VAMP3 vesicle-associated membrane protein 3 0.497015
VPS4A vacuolar protein sorting 4 homolog A (S. cerevisiae) 0.470807
SNAP23 synaptosomal-associated protein, 23kDa 0.434591
TSG101 tumor susceptibility 101 0.421997
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.346829
P4HB prolyl 4-hydroxylase, beta polypeptide 0.325327
FURIN furin (paired basic amino acid cleaving enzyme) 0.308122
EEA1 early endosome antigen 1 0.308122
CD63 CD63 molecule 0.288829
XPO1 exportin 1 0.246769
ATP12A ATPase, H+/K+ transporting, nongastric, alpha polypeptide 0.206082
ATP4A ATPase, H+/K+ exchanging, alpha polypeptide 0.205059
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.198325