urinary system benign neoplasm Gene Set

Dataset DISEASES Text-mining Gene-Disease Assocation Evidence Scores
Category disease or phenotype associations
Type disease
Description An organ system benign neoplasm that is located_in the kidneys, ureteres, bladder or urethra. (Human Disease Ontology, DOID_731)
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Genes

215 genes co-occuring with the disease urinary system benign neoplasm in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

Symbol Name Standardized Value
KRT7 keratin 7, type II 1.88666
TSC2 tuberous sclerosis 2 1.73368
AMACR alpha-methylacyl-CoA racemase 1.68589
CDH16 cadherin 16, KSP-cadherin 1.52116
S100A1 S100 calcium binding protein A1 1.51281
ROS1 ROS proto-oncogene 1 , receptor tyrosine kinase 1.37425
PAX2 paired box 2 1.36422
FLCN folliculin 1.35681
PAX8 paired box 8 1.28261
B3GAT1 beta-1,3-glucuronyltransferase 1 1.26734
WT1 Wilms tumor 1 1.26516
CLDN8 claudin 8 1.25994
PRCC papillary renal cell carcinoma (translocation-associated) 1.22562
DICER1 dicer 1, ribonuclease type III 1.21998
MTOR mechanistic target of rapamycin (serine/threonine kinase) 1.2018
TSC1 tuberous sclerosis 1 1.14985
TFE3 transcription factor binding to IGHM enhancer 3 1.14009
CACNG7 calcium channel, voltage-dependent, gamma subunit 7 1.04251
ZNF135 zinc finger protein 135 0.991065
UPK3A uroplakin 3A 0.988535
SYNGR3 synaptogyrin 3 0.983057
KANK1 KN motif and ankyrin repeat domains 1 0.952021
PVALB parvalbumin 0.915551
KRT20 keratin 20, type I 0.905265
FGFR3 fibroblast growth factor receptor 3 0.865912
MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog 0.858134
DLG2 discs, large homolog 2 (Drosophila) 0.852402
PGR progesterone receptor 0.814693
SRMS src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites 0.799923
NCAM1 neural cell adhesion molecule 1 0.794591
RHEB Ras homolog enriched in brain 0.793771
FXYD2 FXYD domain containing ion transport regulator 2 0.788442
MLANA melan-A 0.766351
KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog 0.733001
TP53 tumor protein p53 0.681096
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 0.67113
PLA2G16 phospholipase A2, group XVI 0.656837
RNF115 ring finger protein 115 0.650903
AQP6 aquaporin 6, kidney specific 0.630813
CD82 CD82 molecule 0.628065
CLDN7 claudin 7 0.625711
PIN4 peptidylprolyl cis/trans isomerase, NIMA-interacting 4 0.608104
BAG2 BCL2-associated athanogene 2 0.6003
KLK3 kallikrein-related peptidase 3 0.594454
ZNF77 zinc finger protein 77 0.578494
ANKRD2 ankyrin repeat domain 2 (stretch responsive muscle) 0.57655
GYLTL1B glycosyltransferase-like 1B 0.563723
MIB1 mindbomb E3 ubiquitin protein ligase 1 0.558674
ESR1 estrogen receptor 1 0.55518
PAAF1 proteasomal ATPase-associated factor 1 0.535796
RHCG Rh family, C glycoprotein 0.503441
SS18 synovial sarcoma translocation, chromosome 18 0.491597
ACPP acid phosphatase, prostate 0.475634
NFYA nuclear transcription factor Y, alpha 0.465038
KITLG KIT ligand 0.457109
KRT5 keratin 5, type II 0.45447
ICK intestinal cell (MAK-like) kinase 0.448441
PTGES2 prostaglandin E synthase 2 0.443547
TAS1R1 taste receptor, type 1, member 1 0.42814
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.424389
SPG20 spastic paraplegia 20 (Troyer syndrome) 0.405678
LATS1 large tumor suppressor kinase 1 0.403438
ENO2 enolase 2 (gamma, neuronal) 0.402318
DIRC2 disrupted in renal carcinoma 2 0.40008
CRNN cornulin 0.399334
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.398216
FH fumarate hydratase 0.392629
KRT8 keratin 8, type II 0.38111
SHD Src homology 2 domain containing transforming protein D 0.37592
KRT19 keratin 19, type I 0.372958
CDH1 cadherin 1, type 1, E-cadherin (epithelial) 0.343106
EGLN2 egl-9 family hypoxia-inducible factor 2 0.337608
DFFB DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase) 0.335778
OGG1 8-oxoguanine DNA glycosylase 0.325552
SIGLEC10 sialic acid binding Ig-like lectin 10 0.325187
NPHP4 nephronophthisis 4 0.323002
EN2 engrailed homeobox 2 0.318635
LMAN1 lectin, mannose-binding, 1 0.318635
CAV1 caveolin 1, caveolae protein, 22kDa 0.317182
MUC1 mucin 1, cell surface associated 0.316092
CD34 CD34 molecule 0.311377
OR2AG1 olfactory receptor, family 2, subfamily AG, member 1 (gene/pseudogene) 0.302337
NKX6-2 NK6 homeobox 2 0.280082
SDHB succinate dehydrogenase complex, subunit B, iron sulfur (Ip) 0.272597
BRAF B-Raf proto-oncogene, serine/threonine kinase 0.27153
LYZ lysozyme 0.270108
CHST14 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 0.263014
FGF3 fibroblast growth factor 3 0.258064
FXYD1 FXYD domain containing ion transport regulator 1 0.253127
ACOT13 acyl-CoA thioesterase 13 0.250311
CTSH cathepsin H 0.248905
ZAK sterile alpha motif and leucine zipper containing kinase AZK 0.248203
FIGF c-fos induced growth factor (vascular endothelial growth factor D) 0.247501
CD63 CD63 molecule 0.24715
PTK7 protein tyrosine kinase 7 (inactive) 0.244345
FUT4 fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific) 0.244345
SLC3A2 solute carrier family 3 (amino acid transporter heavy chain), member 2 0.244345
SYP synaptophysin 0.237706
TFEB transcription factor EB 0.235268
MYOG myogenin (myogenic factor 4) 0.232489
CALB1 calbindin 1, 28kDa 0.226262
GZMM granzyme M (lymphocyte met-ase 1) 0.214975
PDGFRB platelet-derived growth factor receptor, beta polypeptide 0.205585
HCK HCK proto-oncogene, Src family tyrosine kinase 0.199681
CA9 carbonic anhydrase IX 0.195501
GATA3 GATA binding protein 3 0.194865
ENPEP glutamyl aminopeptidase (aminopeptidase A) 0.189859
MATK megakaryocyte-associated tyrosine kinase 0.189859
CA2 carbonic anhydrase II 0.189551
DAXX death-domain associated protein 0.187415
DEFB1 defensin, beta 1 0.186811
LAP3 leucine aminopeptidase 3 0.184128
FOLH1 folate hydrolase (prostate-specific membrane antigen) 1 0.184128
WIPF2 WAS/WASL interacting protein family, member 2 0.170789
NKX2-1 NK2 homeobox 1 0.168381
CCND1 cyclin D1 0.167682
PROX1 prospero homeobox 1 0.162505
CALB2 calbindin 2 0.161139
MSH6 mutS homolog 6 0.160948
CD2AP CD2-associated protein 0.15948
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.157929
GP5 glycoprotein V (platelet) 0.140965
MRPS7 mitochondrial ribosomal protein S7 0.131612
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase 0.131542
CALD1 caldesmon 1 0.131211
S100P S100 calcium binding protein P 0.130427
CASP2 caspase 2, apoptosis-related cysteine peptidase 0.1303
RICTOR RPTOR independent companion of MTOR, complex 2 0.129031
IFNA21 interferon, alpha 21 0.128873
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1) 0.128233
IFNA17 interferon, alpha 17 0.128012
PTGES prostaglandin E synthase 0.126701
APAF1 apoptotic peptidase activating factor 1 0.124984
PXN paxillin 0.12374
MSH2 mutS homolog 2 0.121125
BIRC5 baculoviral IAP repeat containing 5 0.12027
CD24 CD24 molecule 0.118615
MYOD1 myogenic differentiation 1 0.118569
GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase 0.11856
MLH1 mutL homolog 1 0.118375
TAP1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) 0.115947
GNRH1 gonadotropin-releasing hormone 1 (luteinizing-releasing hormone) 0.115531
FLNA filamin A, alpha 0.11406
PCNA proliferating cell nuclear antigen 0.111194
VIM vimentin 0.109956
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) 0.105345
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.104956
MMP9 matrix metallopeptidase 9 0.104803
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 0.104717
HIST2H3PS2 histone cluster 2, H3, pseudogene 2 0.104674
MEN1 multiple endocrine neoplasia I 0.103471
ZMPSTE24 zinc metallopeptidase STE24 0.09439
MET MET proto-oncogene, receptor tyrosine kinase 0.094271
PITX1 paired-like homeodomain 1 0.094134
FBP1 fructose-1,6-bisphosphatase 1 0.093572
NCOA1 nuclear receptor coactivator 1 0.093572
PGM1 phosphoglucomutase 1 0.09307
PKM pyruvate kinase, muscle 0.091409
NR5A1 nuclear receptor subfamily 5, group A, member 1 0.090379
PDGFRA platelet-derived growth factor receptor, alpha polypeptide 0.089876
TFAM transcription factor A, mitochondrial 0.089427
CNR1 cannabinoid receptor 1 (brain) 0.085795
PGRMC1 progesterone receptor membrane component 1 0.08011
ERBB3 erb-b2 receptor tyrosine kinase 3 0.078033
SDF4 stromal cell derived factor 4 0.076597
NUMBL numb homolog (Drosophila)-like 0.076597
GRP gastrin-releasing peptide 0.07525
FSCN1 fascin actin-bundling protein 1 0.074137
TYR tyrosinase 0.071099
RNASEH2A ribonuclease H2, subunit A 0.070853
HAVCR1 hepatitis A virus cellular receptor 1 0.070279
YY1 YY1 transcription factor 0.06997
CD68 CD68 molecule 0.069517
RHCE Rh blood group, CcEe antigens 0.069086
CHGA chromogranin A 0.068426
LYVE1 lymphatic vessel endothelial hyaluronan receptor 1 0.067785
H3F3A H3 histone, family 3A 0.067723
H3F3B H3 histone, family 3B (H3.3B) 0.067723
VHL von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase 0.067538
HBA1 hemoglobin, alpha 1 0.067373
WNT5A wingless-type MMTV integration site family, member 5A 0.067373
FLI1 Fli-1 proto-oncogene, ETS transcription factor 0.067332
NF1 neurofibromin 1 0.06698
F8 coagulation factor VIII, procoagulant component 0.066648
HBA2 hemoglobin, alpha 2 0.066172
AR androgen receptor 0.06522
MAGEA3 melanoma antigen family A3 0.06522
CDX2 caudal type homeobox 2 0.064722
DDC dopa decarboxylase (aromatic L-amino acid decarboxylase) 0.064494
SCN10A sodium channel, voltage gated, type X alpha subunit 0.06437
IGF2 insulin-like growth factor 2 0.063955
SLC26A4 solute carrier family 26 (anion exchanger), member 4 0.063852
GSTA3 glutathione S-transferase alpha 3 0.063707
IFNA2 interferon, alpha 2 0.063665
GSTA2 glutathione S-transferase alpha 2 0.063644
GSTA4 glutathione S-transferase alpha 4 0.063582
GSTA1 glutathione S-transferase alpha 1 0.06325
CASP9 caspase 9, apoptosis-related cysteine peptidase 0.062876
RHD Rh blood group, D antigen 0.062234
JAK3 Janus kinase 3 0.061798
PMEL premelanosome protein 0.061508
ACE2 angiotensin I converting enzyme 2 0.061363
AQP2 aquaporin 2 (collecting duct) 0.060845
MME membrane metallo-endopeptidase 0.060824
CSF1R colony stimulating factor 1 receptor 0.060472
FYN FYN proto-oncogene, Src family tyrosine kinase 0.060348
LCK LCK proto-oncogene, Src family tyrosine kinase 0.060348
MB myoglobin 0.060203
CTSK cathepsin K 0.059933
EPOR erythropoietin receptor 0.059623
DDIT3 DNA-damage-inducible transcript 3 0.059602
ALK anaplastic lymphoma receptor tyrosine kinase 0.059478
PKD1 polycystic kidney disease 1 (autosomal dominant) 0.059375
ERBB4 erb-b2 receptor tyrosine kinase 4 0.059023
MMP12 matrix metallopeptidase 12 0.058734