type iv secretion system complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A complex of proteins related to those involved in bacterial DNA conjugative transfer, that permits the transfer of DNA or proteins into the extracellular milieu or directly into host cells. In general the type IV complex forms a multisubunit cell-envelope-spanning structure composed of a secretion channel and often a pilus or other surface filament or protein(s). (Gene Ontology, GO_0043684)
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Genes

71 proteins co-occuring with the type iv secretion system complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
TSPAN14 tetraspanin 14 1.18851
HMP19 HMP19 protein 1.06144
MAP3K3 mitogen-activated protein kinase kinase kinase 3 1.02281
PRRC2A proline-rich coiled-coil 2A 0.893018
CXCL8 chemokine (C-X-C motif) ligand 8 0.86123
RHO rhodopsin 0.858014
MOBP myelin-associated oligodendrocyte basic protein 0.835056
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 0.79652
NOD1 nucleotide-binding oligomerization domain containing 1 0.779583
EMP3 epithelial membrane protein 3 0.775014
TARP TCR gamma alternate reading frame protein 0.768627
VBP1 von Hippel-Lindau binding protein 1 0.754076
NLRC4 NLR family, CARD domain containing 4 0.734666
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.677673
TLN2 talin 2 0.636295
HTRA1 HtrA serine peptidase 1 0.612048
RABAC1 Rab acceptor 1 (prenylated) 0.587199
C1QBP complement component 1, q subcomponent binding protein 0.571745
TLR5 toll-like receptor 5 0.557214
DVL3 dishevelled segment polarity protein 3 0.548947
VRK1 vaccinia related kinase 1 0.528388
ATN1 atrophin 1 0.519798
SLC45A2 solute carrier family 45, member 2 0.518981
MET MET proto-oncogene, receptor tyrosine kinase 0.504318
PTPRA protein tyrosine phosphatase, receptor type, A 0.501881
TXNL1 thioredoxin-like 1 0.494585
RAN RAN, member RAS oncogene family 0.486904
ALLC allantoicase 0.481258
NOD2 nucleotide-binding oligomerization domain containing 2 0.429072
VPS29 vacuolar protein sorting 29 homolog (S. cerevisiae) 0.415337
VIPR1 vasoactive intestinal peptide receptor 1 0.41221
IMPA1 inositol(myo)-1(or 4)-monophosphatase 1 0.409089
LPIN1 lipin 1 0.39471
CD248 CD248 molecule, endosialin 0.389296
HCFC1 host cell factor C1 0.38428
CARD17 caspase recruitment domain family, member 17 0.378507
IL32 interleukin 32 0.376202
DVL2 dishevelled segment polarity protein 2 0.371599
DNAH8 dynein, axonemal, heavy chain 8 0.368153
TLN1 talin 1 0.35899
ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 0.355563
IFNAR2 interferon (alpha, beta and omega) receptor 2 0.341907
CS citrate synthase 0.340017
IL12B interleukin 12B 0.336996
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) 0.332472
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 0.330589
BIN1 bridging integrator 1 0.329461
MANBA mannosidase, beta A, lysosomal 0.323825
TXNDC9 thioredoxin domain containing 9 0.317082
SRC SRC proto-oncogene, non-receptor tyrosine kinase 0.304771
RANBP1 RAN binding protein 1 0.274101
IRAK1 interleukin-1 receptor-associated kinase 1 0.272633
CD74 CD74 molecule, major histocompatibility complex, class II invariant chain 0.270434
LRP6 low density lipoprotein receptor-related protein 6 0.26312
SCN10A sodium channel, voltage gated, type X alpha subunit 0.251476
DVL1 dishevelled segment polarity protein 1 0.247854
CFL1 cofilin 1 (non-muscle) 0.246046
NME3 NME/NM23 nucleoside diphosphate kinase 3 0.235607
CPEB1 cytoplasmic polyadenylation element binding protein 1 0.235249
EXO1 exonuclease 1 0.229176
NME4 NME/NM23 nucleoside diphosphate kinase 4 0.22279
PPP1R14A protein phosphatase 1, regulatory (inhibitor) subunit 14A 0.218563
CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase 0.218563
MGAM maltase-glucoamylase 0.21681
CDC42 cell division cycle 42 0.210549
TLR2 toll-like receptor 2 0.208481
IFNG interferon, gamma 0.18796
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.180634
CD4 CD4 molecule 0.172735
ADAM17 ADAM metallopeptidase domain 17 0.16298
CDC25C cell division cycle 25C 0.161275