type iii protein secretion system complex Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A complex of approximately 20 proteins, most of which are located in the cytoplasmic membrane that carries out protein secretion in the bacterial type III secretion system; type III secretion also requires a cytoplasmic, probably membrane-associated ATPase. (Gene Ontology, GO_0030257)
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117 proteins co-occuring with the type iii protein secretion system complex cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
HRC histidine rich calcium binding protein 2.19407
NLRC4 NLR family, CARD domain containing 4 1.53161
CD3E CD3e molecule, epsilon (CD3-TCR complex) 1.40186
CARD17 caspase recruitment domain family, member 17 1.30551
FAM83H family with sequence similarity 83, member H 1.08831
YME1L1 YME1-like 1 ATPase 1.07207
TLR5 toll-like receptor 5 1.04331
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked 0.950189
DMBX1 diencephalon/mesencephalon homeobox 1 0.909251
HEMK1 HemK methyltransferase family member 1 0.902281
TSPO translocator protein (18kDa) 0.863528
ATN1 atrophin 1 0.86077
COPB1 coatomer protein complex, subunit beta 1 0.859852
CHRDL1 chordin-like 1 0.854339
MORF4 mortality factor 4 (pseudogene) 0.811193
PARP1 poly (ADP-ribose) polymerase 1 0.802938
NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain) 0.786902
HIF3A hypoxia inducible factor 3, alpha subunit 0.778212
CDC42 cell division cycle 42 0.742769
NOD1 nucleotide-binding oligomerization domain containing 1 0.692516
COPB2 coatomer protein complex, subunit beta 2 (beta prime) 0.684644
TIGD1 tigger transposable element derived 1 0.682899
ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 0.672894
IL1B interleukin 1, beta 0.666394
HECA headcase homolog (Drosophila) 0.66164
CXCL8 chemokine (C-X-C motif) ligand 8 0.661208
DNAH8 dynein, axonemal, heavy chain 8 0.653019
PNPT1 polyribonucleotide nucleotidyltransferase 1 0.596435
ARPP21 cAMP-regulated phosphoprotein, 21kDa 0.590973
NAIP NLR family, apoptosis inhibitory protein 0.585523
MYD88 myeloid differentiation primary response 88 0.585105
HDAC11 histone deacetylase 11 0.574662
CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 0.546885
SLC19A3 solute carrier family 19 (thiamine transporter), member 3 0.545648
LECT2 leukocyte cell-derived chemotaxin 2 0.540706
AURKAIP1 aurora kinase A interacting protein 1 0.538649
CLPP caseinolytic mitochondrial matrix peptidase proteolytic subunit 0.535772
AHNAK AHNAK nucleoprotein 0.534951
EMP3 epithelial membrane protein 3 0.527569
CD248 CD248 molecule, endosialin 0.525522
RPS3 ribosomal protein S3 0.524294
TARP TCR gamma alternate reading frame protein 0.521841
TRH thyrotropin-releasing hormone 0.520206
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) 0.514085
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 0.512455
CCNDBP1 cyclin D-type binding-protein 1 0.503506
STX2 syntaxin 2 0.50107
IDI1 isopentenyl-diphosphate delta isomerase 1 0.49418
NLRP3 NLR family, pyrin domain containing 3 0.493775
RPGR retinitis pigmentosa GTPase regulator 0.487307
GPR162 G protein-coupled receptor 162 0.477233
IL10 interleukin 10 0.460401
IL17A interleukin 17A 0.454418
CD4 CD4 molecule 0.448054
ZSCAN1 zinc finger and SCAN domain containing 1 0.444482
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 0.439728
SEC24A SEC24 family member A 0.433801
SEC24B SEC24 family member B 0.41886
NOD2 nucleotide-binding oligomerization domain containing 2 0.416511
SLC19A2 solute carrier family 19 (thiamine transporter), member 2 0.407529
NIPBL Nipped-B homolog (Drosophila) 0.402859
SLC9A3R2 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2 0.392775
SLC11A1 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 1 0.392388
ADGRG1 adhesion G protein-coupled receptor G1 0.392001
HTRA1 HtrA serine peptidase 1 0.380045
RTN4R reticulon 4 receptor 0.373899
TPBG trophoblast glycoprotein 0.369301
SCN10A sodium channel, voltage gated, type X alpha subunit 0.364331
IL7R interleukin 7 receptor 0.356324
TNF tumor necrosis factor 0.352901
MZF1 myeloid zinc finger 1 0.344935
AES amino-terminal enhancer of split 0.344935
RABAC1 Rab acceptor 1 (prenylated) 0.327956
PHB2 prohibitin 2 0.326829
GOLGA2 golgin A2 0.325702
CTPS1 CTP synthase 1 0.313718
TMED10 transmembrane emp24-like trafficking protein 10 (yeast) 0.307749
CDSN corneodesmosin 0.291787
SHC2 SHC (Src homology 2 domain containing) transforming protein 2 0.287721
HPX hemopexin 0.285507
MCHR1 melanin-concentrating hormone receptor 1 0.277038
CCDC130 coiled-coil domain containing 130 0.277038
RIPK1 receptor (TNFRSF)-interacting serine-threonine kinase 1 0.276304
PSCA prostate stem cell antigen 0.272633
ZNF346 zinc finger protein 346 0.2708
ANXA2 annexin A2 0.266774
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A 0.266408
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.26166
CD79A CD79a molecule, immunoglobulin-associated alpha 0.259837
ADSL adenylosuccinate lyase 0.255107
NR2E3 nuclear receptor subfamily 2, group E, member 3 0.251114
IQGAP1 IQ motif containing GTPase activating protein 1 0.250026
GLA galactosidase, alpha 0.241356
BAK1 BCL2-antagonist/killer 1 0.239557
PYCARD PYD and CARD domain containing 0.237042
SCTR secretin receptor 0.233817
GRAP2 GRB2-related adaptor protein 2 0.228108
SLC26A3 solute carrier family 26 (anion exchanger), member 3 0.209858
DEFB4A defensin, beta 4A 0.209858
PKN1 protein kinase N1 0.209513
POU2F3 POU class 2 homeobox 3 0.202009
VIPR1 vasoactive intestinal peptide receptor 1 0.199659
DHRS2 dehydrogenase/reductase (SDR family) member 2 0.194045
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.184241
PADI4 peptidyl arginine deiminase, type IV 0.183935
TLR4 toll-like receptor 4 0.183631
GRM1 glutamate receptor, metabotropic 1 0.182122
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1 0.181227
TLR2 toll-like receptor 2 0.181227
RHCE Rh blood group, CcEe antigens 0.173543
GADD45B growth arrest and DNA-damage-inducible, beta 0.171673
TJP1 tight junction protein 1 0.164089
STX1A syntaxin 1A (brain) 0.161693
COPE coatomer protein complex, subunit epsilon 0.161068
WNK1 WNK lysine deficient protein kinase 1 0.160053
PARK2 parkin RBR E3 ubiquitin protein ligase 0.157578
SERPINA5 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 0.157039