tube Gene Set

Dataset GeneRIF Biological Term Annotations
Category structural or functional annotations
Type biological term
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Genes

236 genes co-occuring with the biological term tube in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.

Symbol Name
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2
ACKR3 atypical chemokine receptor 3
ADM adrenomedullin
AHR aryl hydrocarbon receptor
AKR1C3 aldo-keto reductase family 1, member C3
AKT1 v-akt murine thymoma viral oncogene homolog 1
AMOT angiomotin
AMT aminomethyltransferase
APOE apolipoprotein E
AQP9 aquaporin 9
AR androgen receptor
BCL2 B-cell CLL/lymphoma 2
BMP2 bone morphogenetic protein 2
BRCA1 breast cancer 1, early onset
BRCA2 breast cancer 2, early onset
C1QA complement component 1, q subcomponent, A chain
CALB2 calbindin 2
CALCA calcitonin-related polypeptide alpha
CASP8 caspase 8, apoptosis-related cysteine peptidase
CBS cystathionine-beta-synthase
CCNE1 cyclin E1
CD151 CD151 molecule (Raph blood group)
CD209 CD209 molecule
CD320 CD320 molecule
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1)
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1)
CDKN2A cyclin-dependent kinase inhibitor 2A
CELSR1 cadherin, EGF LAG seven-pass G-type receptor 1
CHAT choline O-acetyltransferase
CHGA chromogranin A
CLEC1B C-type lectin domain family 1, member B
CLIC4 chloride intracellular channel 4
CLIP1 CAP-GLY domain containing linker protein 1
CNR1 cannabinoid receptor 1 (brain)
COMT catechol-O-methyltransferase
CPB1 carboxypeptidase B1 (tissue)
CPB2 carboxypeptidase B2 (plasma)
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CTSB cathepsin B
CX3CL1 chemokine (C-X3-C motif) ligand 1
CX3CR1 chemokine (C-X3-C motif) receptor 1
CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)
CXCL12 chemokine (C-X-C motif) ligand 12
CXCL8 chemokine (C-X-C motif) ligand 8
CXCR2 chemokine (C-X-C motif) receptor 2
CXCR4 chemokine (C-X-C motif) receptor 4
CYP1A2 cytochrome P450, family 1, subfamily A, polypeptide 2
CYP2C9 cytochrome P450, family 2, subfamily C, polypeptide 9
CYR61 cysteine-rich, angiogenic inducer, 61
DACT1 dishevelled-binding antagonist of beta-catenin 1
DHFR dihydrofolate reductase
DVL2 dishevelled segment polarity protein 2
DVL3 dishevelled segment polarity protein 3
ECSCR endothelial cell surface expressed chemotaxis and apoptosis regulator
EGFL7 EGF-like-domain, multiple 7
EMCN endomucin
EPHA2 EPH receptor A2
EPHB4 EPH receptor B4
ERBB2 erb-b2 receptor tyrosine kinase 2
ESAM endothelial cell adhesion molecule
ESR1 estrogen receptor 1
F2 coagulation factor II (thrombin)
F5 coagulation factor V (proaccelerin, labile factor)
FAAH fatty acid amide hydrolase
FBLN7 fibulin 7
FGF1 fibroblast growth factor 1 (acidic)
FGF10 fibroblast growth factor 10
FGF2 fibroblast growth factor 2 (basic)
FGFR3 fibroblast growth factor receptor 3
FLNA filamin A, alpha
FLT1 fms-related tyrosine kinase 1
FNDC5 fibronectin type III domain containing 5
FOLH1 folate hydrolase (prostate-specific membrane antigen) 1
FOXO1 forkhead box O1
FOXO3 forkhead box O3
FUZ fuzzy planar cell polarity protein
FZD6 frizzled class receptor 6
GAB1 GRB2-associated binding protein 1
GAB2 GRB2-associated binding protein 2
GABARAP GABA(A) receptor-associated protein
GAST gastrin
GC group-specific component (vitamin D binding protein)
GCH1 GTP cyclohydrolase 1
GDF2 growth differentiation factor 2
GJB1 gap junction protein, beta 1, 32kDa
GLDC glycine dehydrogenase (decarboxylating)
GLI1 GLI family zinc finger 1
GPC5 glypican 5
GYPB glycophorin B (MNS blood group)
GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)
HBEGF heparin-binding EGF-like growth factor
HES7 hes family bHLH transcription factor 7
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HIST3H3 histone cluster 3, H3
HOXA11 homeobox A11
HOXA9 homeobox A9
HOXB1 homeobox B1
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein
ID3 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
IGF2 insulin-like growth factor 2
IL18 interleukin 18
IL1B interleukin 1, beta
IL1R1 interleukin 1 receptor, type I
IL2 interleukin 2
INHA inhibin, alpha
ISL1 ISL LIM homeobox 1
ISPD isoprenoid synthase domain containing
ITGA1 integrin, alpha 1
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
ITGAV integrin, alpha V
KCNE1 potassium channel, voltage gated subfamily E regulatory beta subunit 1
KDR kinase insert domain receptor
KIAA0586 KIAA0586
KITLG KIT ligand
KLF2 Kruppel-like factor 2
LEPQTL1 Leptin, serum levels of
LEPR leptin receptor
LIF leukemia inhibitory factor
LIFR leukemia inhibitory factor receptor alpha
LMAN1 lectin, mannose-binding, 1
LMNB1 lamin B1
LPAR1 lysophosphatidic acid receptor 1
LPAR3 lysophosphatidic acid receptor 3
LRP6 low density lipoprotein receptor-related protein 6
MAP3K5 mitogen-activated protein kinase kinase kinase 5
MAPK6 mitogen-activated protein kinase 6
MARVELD2 MARVEL domain containing 2
MECP2 methyl CpG binding protein 2
MEOX2 mesenchyme homeobox 2
MICA MHC class I polypeptide-related sequence A
MID1 midline 1
MIR197 microRNA 197
MIR199A1 microRNA 199a-1
MIR205 microRNA 205
MIR214 microRNA 214
MLH1 mutL homolog 1
MLN motilin
MMP14 matrix metallopeptidase 14 (membrane-inserted)
MMP2 matrix metallopeptidase 2
MSH2 mutS homolog 2
MSX2 msh homeobox 2
MTHFD1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase
MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase
NAT2 N-acetyltransferase 2 (arylamine N-acetyltransferase)
NBR1 neighbor of BRCA1 gene 1
NCOA3 nuclear receptor coactivator 3
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
NKX2-1 NK2 homeobox 1
NOS2 nitric oxide synthase 2, inducible
NOS3 nitric oxide synthase 3 (endothelial cell)
NOX4 NADPH oxidase 4
NR5A1 nuclear receptor subfamily 5, group A, member 1
NTN1 netrin 1
NTN4 netrin 4
OLFM1 olfactomedin 1
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1
ORAI1 ORAI calcium release-activated calcium modulator 1
PAK2 p21 protein (Cdc42/Rac)-activated kinase 2
PAK4 p21 protein (Cdc42/Rac)-activated kinase 4
PARD3 par-3 family cell polarity regulator
PAX3 paired box 3
PAX8 paired box 8
PDCD10 programmed cell death 10
PDE6B phosphodiesterase 6B, cGMP-specific, rod, beta
PDGFB platelet-derived growth factor beta polypeptide
PDGFRA platelet-derived growth factor receptor, alpha polypeptide
PDPN podoplanin
PGR progesterone receptor
PI3 peptidase inhibitor 3, skin-derived
PRICKLE1 prickle homolog 1 (Drosophila)
PRKDC protein kinase, DNA-activated, catalytic polypeptide
PRLR prolactin receptor
PSG1 pregnancy specific beta-1-glycoprotein 1
PTCH1 patched 1
PTGIS prostaglandin I2 (prostacyclin) synthase
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
PTK2 protein tyrosine kinase 2
PTK7 protein tyrosine kinase 7 (inactive)
PTPRJ protein tyrosine phosphatase, receptor type, J
RGS16 regulator of G-protein signaling 16
RHOC ras homolog family member C
RHOJ ras homolog family member J
RREB1 ras responsive element binding protein 1
S100A4 S100 calcium binding protein A4
S100B S100 calcium binding protein B
S1PR1 sphingosine-1-phosphate receptor 1
SCGB1A1 secretoglobin, family 1A, member 1 (uteroglobin)
SEC24B SEC24 family member B
SERPINA6 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
SERPINF1 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1
SFRP4 secreted frizzled-related protein 4
SIRT1 sirtuin 1
SLC19A1 solute carrier family 19 (folate transporter), member 1
SLC19A2 solute carrier family 19 (thiamine transporter), member 2
SLIT3 slit homolog 3 (Drosophila)
SLPI secretory leukocyte peptidase inhibitor
SOX10 SRY (sex determining region Y)-box 10
SOX18 SRY (sex determining region Y)-box 18
SP1 Sp1 transcription factor
SPRY1 sprouty homolog 1, antagonist of FGF signaling (Drosophila)
SRPX2 sushi-repeat containing protein, X-linked 2
STAM2 signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
SUFU suppressor of fused homolog (Drosophila)
SULT1A1 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1
T T, brachyury homolog (mouse)
TCN2 transcobalamin II
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor)
TEAD4 TEA domain family member 4
TEK TEK tyrosine kinase, endothelial
TERC telomerase RNA component
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
TGM2 transglutaminase 2
THSD7A thrombospondin, type I, domain containing 7A
TIMP3 TIMP metallopeptidase inhibitor 3
TLR10 toll-like receptor 10
TLR7 toll-like receptor 7
TLR8 toll-like receptor 8
TLR9 toll-like receptor 9
TMEM5 transmembrane protein 5
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b
TNFSF11 tumor necrosis factor (ligand) superfamily, member 11
TP53 tumor protein p53
TRADD TNFRSF1A-associated via death domain
UCP2 uncoupling protein 2 (mitochondrial, proton carrier)
VANGL1 VANGL planar cell polarity protein 1
VANGL2 VANGL planar cell polarity protein 2
VEGFA vascular endothelial growth factor A
VEGFC vascular endothelial growth factor C
ZC3H12A zinc finger CCCH-type containing 12A