tube development Gene Set

Dataset GO Biological Process Annotations
Category structural or functional annotations
Type biological process
Description The process whose specific outcome is the progression of a tube over time, from its initial formation to a mature structure. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues including lung and trachea, kidney, the mammary gland, the vascular system and the gastrointestinal and urinary-genital tracts. (Gene Ontology, GO_0035295)
External Link http://amigo.geneontology.org/amigo/term/GO:0035295
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Genes

166 genes participating in the tube development biological process from the curated GO Biological Process Annotations dataset.

Symbol Name
ACAT1 acetyl-CoA acetyltransferase 1
ADA adenosine deaminase
ALDH1A2 aldehyde dehydrogenase 1 family, member A2
ALX4 ALX homeobox 4
AMBRA1 autophagy/beclin-1 regulator 1
AQP1 aquaporin 1 (Colton blood group)
AQP11 aquaporin 11
AQP2 aquaporin 2 (collecting duct)
ARG2 arginase 2
ASS1 argininosuccinate synthase 1
ATRX alpha thalassemia/mental retardation syndrome X-linked
BDNF brain-derived neurotrophic factor
BMP4 bone morphogenetic protein 4
BMP7 bone morphogenetic protein 7
BMPER BMP binding endothelial regulator
C2CD3 C2 calcium-dependent domain containing 3
CALB1 calbindin 1, 28kDa
CAT catalase
CCKBR cholecystokinin B receptor
CCNB1 cyclin B1
CER1 cerberus 1, DAN family BMP antagonist
CHD8 chromodomain helicase DNA binding protein 8
CLMP CXADR-like membrane protein
COBL cordon-bleu WH2 repeat protein
COL3A1 collagen, type III, alpha 1
CPS1 carbamoyl-phosphate synthase 1, mitochondrial
CRLF1 cytokine receptor-like factor 1
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CXCL8 chemokine (C-X-C motif) ligand 8
CYP1A1 cytochrome P450, family 1, subfamily A, polypeptide 1
DAB1 Dab, reelin signal transducer, homolog 1 (Drosophila)
DACT2 dishevelled-binding antagonist of beta-catenin 2
DCHS1 dachsous cadherin-related 1
DLG5 discs, large homolog 5 (Drosophila)
DLL1 delta-like 1 (Drosophila)
DVL1 dishevelled segment polarity protein 1
EPCAM epithelial cell adhesion molecule
EPHA2 EPH receptor A2
FAM212A family with sequence similarity 212, member A
FAT4 FAT atypical cadherin 4
FGF9 fibroblast growth factor 9
FGFR1 fibroblast growth factor receptor 1
FGFR2 fibroblast growth factor receptor 2
FOXC1 forkhead box C1
FOXC2 forkhead box C2
FOXF1 forkhead box F1
FOXF2 forkhead box F2
FOXJ1 forkhead box J1
GAK cyclin G associated kinase
GATA2 GATA binding protein 2
GATA4 GATA binding protein 4
GDF11 growth differentiation factor 11
GJA5 gap junction protein, alpha 5, 40kDa
GLI2 GLI family zinc finger 2
GLI3 GLI family zinc finger 3
GRHL2 grainyhead-like 2 (Drosophila)
HAND1 heart and neural crest derivatives expressed 1
HECA headcase homolog (Drosophila)
HES1 hes family bHLH transcription factor 1
HES5 hes family bHLH transcription factor 5
HEYL hes-related family bHLH transcription factor with YRPW motif-like
HHEX hematopoietically expressed homeobox
HNF1B HNF1 homeobox B
HOXA5 homeobox A5
HRH2 histamine receptor H2
IFT122 intraflagellar transport 122
IFT172 intraflagellar transport 172
ING2 inhibitor of growth family, member 2
ITGA6 integrin, alpha 6
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
ITGB4 integrin, beta 4
JAG1 jagged 1
KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
LHX1 LIM homeobox 1
MED1 mediator complex subunit 1
MIXL1 Mix paired-like homeobox
MYB v-myb avian myeloblastosis viral oncogene homolog
MYOCD myocardin
NCKAP1 NCK-associated protein 1
NDRG4 NDRG family member 4
NF1 neurofibromin 1
NKX2-2 NK2 homeobox 2
NKX2-5 NK2 homeobox 5
NKX2-6 NK2 homeobox 6
NOTCH1 notch 1
NPHP3 nephronophthisis 3 (adolescent)
NPNT nephronectin
NR1H4 nuclear receptor subfamily 1, group H, member 4
OSR1 odd-skipped related transciption factor 1
OTC ornithine carbamoyltransferase
OXTR oxytocin receptor
PAX2 paired box 2
PAX8 paired box 8
PCSK5 proprotein convertase subtilisin/kexin type 5
PDX1 pancreatic and duodenal homeobox 1
PHGDH phosphoglycerate dehydrogenase
PKD1 polycystic kidney disease 1 (autosomal dominant)
PKD2 polycystic kidney disease 2 (autosomal dominant)
PKDCC protein kinase domain containing, cytoplasmic
PLOD3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
PLXNA2 plexin A2
POU3F3 POU class 3 homeobox 3
PROX1 prospero homeobox 1
RAD21L1 RAD21-like 1 (S. pombe)
RARA retinoic acid receptor, alpha
RARB retinoic acid receptor, beta
RARRES2 retinoic acid receptor responder (tazarotene induced) 2
RB1 retinoblastoma 1
REC8 REC8 meiotic recombination protein
RET ret proto-oncogene
RNASE10 ribonuclease, RNase A family, 10 (non-active)
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila)
SALL1 spalt-like transcription factor 1
SALL2 spalt-like transcription factor 2
SDC1 syndecan 1
SDC4 syndecan 4
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
SFRP1 secreted frizzled-related protein 1
SIM1 single-minded family bHLH transcription factor 1
SIX1 SIX homeobox 1
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1
SLIT2 slit homolog 2 (Drosophila)
SMAD1 SMAD family member 1
SMAD2 SMAD family member 2
SMAD3 SMAD family member 3
SMAD5 SMAD family member 5
SMAD6 SMAD family member 6
SMAD7 SMAD family member 7
SMAD9 SMAD family member 9
SMO smoothened, frizzled class receptor
SOX17 SRY (sex determining region Y)-box 17
SOX18 SRY (sex determining region Y)-box 18
SOX9 SRY (sex determining region Y)-box 9
SPRY1 sprouty homolog 1, antagonist of FGF signaling (Drosophila)
STAT1 signal transducer and activator of transcription 1, 91kDa
STIL SCL/TAL1 interrupting locus
STRA6 stimulated by retinoic acid 6
TBC1D20 TBC1 domain family, member 20
TBX18 T-box 18
TCF21 transcription factor 21
TCF7 transcription factor 7 (T-cell specific, HMG-box)
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box)
TFAP2B transcription factor AP-2 beta (activating enhancer binding protein 2 beta)
TGFB1 transforming growth factor, beta 1
TGFB2 transforming growth factor, beta 2
TGFB3 transforming growth factor, beta 3
TGFBR2 transforming growth factor, beta receptor II (70/80kDa)
TK1 thymidine kinase 1, soluble
TNF tumor necrosis factor
TRAF3IP1 TNF receptor-associated factor 3 interacting protein 1
TRAF4 TNF receptor-associated factor 4
TRIM71 tripartite motif containing 71, E3 ubiquitin protein ligase
TSHZ3 teashirt zinc finger homeobox 3
TTC8 tetratricopeptide repeat domain 8
UMOD uromodulin
VPS52 vacuolar protein sorting 52 homolog (S. cerevisiae)
WDR48 WD repeat domain 48
WNT11 wingless-type MMTV integration site family, member 11
WNT4 wingless-type MMTV integration site family, member 4
WNT5A wingless-type MMTV integration site family, member 5A
WNT7A wingless-type MMTV integration site family, member 7A
WNT7B wingless-type MMTV integration site family, member 7B
WNT9B wingless-type MMTV integration site family, member 9B
WT1 Wilms tumor 1
ZFP36L1 ZFP36 ring finger protein-like 1
ZNF358 zinc finger protein 358