tretinoin-390 Gene Set

Dataset CMAP Signatures of Differentially Expressed Genes for Small Molecules
Category transcriptomics
Type small molecule perturbation
Description small molecule perturbation identified as [small molecule name]-[perturbation ID] (ChIP-X Enrichment Analysis)
Similar Terms
Downloads & Tools

Genes

200 genes differentially expressed following the tretinoin-390 small molecule perturbation from the CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.

increased expression

Symbol Name
ACOT9 acyl-CoA thioesterase 9
ADD3 adducin 3 (gamma)
AMFR autocrine motility factor receptor, E3 ubiquitin protein ligase
ARHGAP12 Rho GTPase activating protein 12
ARRB1 arrestin, beta 1
ARRB2 arrestin, beta 2
ATOX1 antioxidant 1 copper chaperone
BCL2A1 BCL2-related protein A1
BIK BCL2-interacting killer (apoptosis-inducing)
BTG2 BTG family, member 2
C11ORF49 chromosome 11 open reading frame 49
CCL2 chemokine (C-C motif) ligand 2
CCR1 chemokine (C-C motif) receptor 1
CCR3 chemokine (C-C motif) receptor 3
CD1D CD1d molecule
CD38 CD38 molecule
CEBPB CCAAT/enhancer binding protein (C/EBP), beta
CFP complement factor properdin
CIITA class II, major histocompatibility complex, transactivator
CKB creatine kinase, brain
COQ3 coenzyme Q3 methyltransferase
CPT2 carnitine palmitoyltransferase 2
CSF1R colony stimulating factor 1 receptor
DHRS3 dehydrogenase/reductase (SDR family) member 3
DNAJB12 DnaJ (Hsp40) homolog, subfamily B, member 12
DPF2 D4, zinc and double PHD fingers family 2
EHBP1L1 EH domain binding protein 1-like 1
ELF4 E74-like factor 4 (ets domain transcription factor)
ETV5 ets variant 5
FBP1 fructose-1,6-bisphosphatase 1
FGR FGR proto-oncogene, Src family tyrosine kinase
FKBP8 FK506 binding protein 8, 38kDa
FLOT1 flotillin 1
GIPC1 GIPC PDZ domain containing family, member 1
GM2A GM2 ganglioside activator
GOSR2 golgi SNAP receptor complex member 2
GPKOW G patch domain and KOW motifs
GPR15 G protein-coupled receptor 15
HBEGF heparin-binding EGF-like growth factor
HIF1AN hypoxia inducible factor 1, alpha subunit inhibitor
ICAM1 intercellular adhesion molecule 1
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein
INPP5K inositol polyphosphate-5-phosphatase K
ITGA6 integrin, alpha 6
KIF21B kinesin family member 21B
LILRA5 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5
LILRB2 leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2
LINC00339 long intergenic non-protein coding RNA 339
LPPR2 lipid phosphate phosphatase-related protein type 2
LRMP lymphoid-restricted membrane protein
LTB4R leukotriene B4 receptor
LUZP1 leucine zipper protein 1
MAPT microtubule-associated protein tau
MARCKSL1 MARCKS-like 1
MDC1 mediator of DNA-damage checkpoint 1
MOB3B MOB kinase activator 3B
MSH3 mutS homolog 3
MYBPH myosin binding protein H
NCF1C neutrophil cytosolic factor 1C pseudogene
NCOA3 nuclear receptor coactivator 3
NINJ2 ninjurin 2
NNAT neuronatin
NOTCH2 notch 2
NOX1 NADPH oxidase 1
NUMA1 nuclear mitotic apparatus protein 1
PIGV phosphatidylinositol glycan anchor biosynthesis, class V
PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma
PKN1 protein kinase N1
PLEKHO1 pleckstrin homology domain containing, family O member 1
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1
POR P450 (cytochrome) oxidoreductase
PTCD1 pentatricopeptide repeat domain 1
PTN pleiotrophin
PTPRA protein tyrosine phosphatase, receptor type, A
RAB3D RAB3D, member RAS oncogene family
RBM19 RNA binding motif protein 19
RHOBTB3 Rho-related BTB domain containing 3
RHOQ ras homolog family member Q
SCD stearoyl-CoA desaturase (delta-9-desaturase)
SEL1L3 sel-1 suppressor of lin-12-like 3 (C. elegans)
SEMA6B sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B
SIPA1 signal-induced proliferation-associated 1
SLA Src-like-adaptor
SLC11A2 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2
SLC12A4 solute carrier family 12 (potassium/chloride transporter), member 4
SLC23A2 solute carrier family 23 (ascorbic acid transporter), member 2
SLC2A5 solute carrier family 2 (facilitated glucose/fructose transporter), member 5
SMAD3 SMAD family member 3
SMOX spermine oxidase
SNAP25 synaptosomal-associated protein, 25kDa
SYDE1 synapse defective 1, Rho GTPase, homolog 1 (C. elegans)
TBL2 transducin (beta)-like 2
TGM2 transglutaminase 2
TGM5 transglutaminase 5
TNFAIP2 tumor necrosis factor, alpha-induced protein 2
TRABD TraB domain containing
TTLL4 tubulin tyrosine ligase-like family member 4
ZER1 zyg-11 related, cell cycle regulator
ZMAT3 zinc finger, matrin-type 3
ZNF592 zinc finger protein 592

decreased expression

Symbol Name
ACTC1 actin, alpha, cardiac muscle 1
ACTG2 actin, gamma 2, smooth muscle, enteric
AGO4 argonaute RISC catalytic component 4
ALOX15B arachidonate 15-lipoxygenase, type B
ANAPC2 anaphase promoting complex subunit 2
ASAP1-IT1 ASAP1 intronic transcript 1
BAHCC1 BAH domain and coiled-coil containing 1
BNC2 basonuclin 2
C12ORF29 chromosome 12 open reading frame 29
C1ORF95 chromosome 1 open reading frame 95
CCL21 chemokine (C-C motif) ligand 21
CCNA1 cyclin A1
CD302 CD302 molecule
CD68 CD68 molecule
CLEC2B C-type lectin domain family 2, member B
CPA3 carboxypeptidase A3 (mast cell)
CUBN cubilin (intrinsic factor-cobalamin receptor)
DDR2 discoidin domain receptor tyrosine kinase 2
EIF2B3 eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa
EMILIN2 elastin microfibril interfacer 2
EPHX1 epoxide hydrolase 1, microsomal (xenobiotic)
ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)
FHL3 four and a half LIM domains 3
FSTL4 follistatin-like 4
GABRA4 gamma-aminobutyric acid (GABA) A receptor, alpha 4
GNG4 guanine nucleotide binding protein (G protein), gamma 4
GPN3 GPN-loop GTPase 3
GPR21 G protein-coupled receptor 21
GRB7 growth factor receptor-bound protein 7
GSTA4 glutathione S-transferase alpha 4
HGSNAT heparan-alpha-glucosaminide N-acetyltransferase
HPGDS hematopoietic prostaglandin D synthase
IFIT3 interferon-induced protein with tetratricopeptide repeats 3
IFNG interferon, gamma
IL19 interleukin 19
INHA inhibin, alpha
IQCG IQ motif containing G
JADE3 jade family PHD finger 3
KATNBL1 katanin p80 subunit B-like 1
KBTBD4 kelch repeat and BTB (POZ) domain containing 4
KCNN2 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2
KIAA0509 uncharacterized LOC57242
KIR2DL3 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3
KIR3DS1 killer cell immunoglobulin-like receptor, three domains, short cytoplasmic tail, 1
KLF15 Kruppel-like factor 15
LPAR6 lysophosphatidic acid receptor 6
LYPLA2P1 lysophospholipase II pseudogene 1
MAL mal, T-cell differentiation protein
METTL8 methyltransferase like 8
MGC12488
MKL2 MKL/myocardin-like 2
MRTO4 mRNA turnover 4 homolog (S. cerevisiae)
MYBBP1A MYB binding protein (P160) 1a
MYC v-myc avian myelocytomatosis viral oncogene homolog
NAT8 N-acetyltransferase 8 (GCN5-related, putative)
NCS1 neuronal calcium sensor 1
NELL2 NEL-like 2 (chicken)
NME3 NME/NM23 nucleoside diphosphate kinase 3
NR1D2 nuclear receptor subfamily 1, group D, member 2
NRSN2 neurensin 2
NTHL1 nth endonuclease III-like 1 (E. coli)
NXF3 nuclear RNA export factor 3
OR2B6 olfactory receptor, family 2, subfamily B, member 6
PIEZO2 piezo-type mechanosensitive ion channel component 2
PIGR polymeric immunoglobulin receptor
PLA2G7 phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
PPRC1 peroxisome proliferator-activated receptor gamma, coactivator-related 1
PRRX1 paired related homeobox 1
PUS7 pseudouridylate synthase 7 (putative)
PUS7L pseudouridylate synthase 7 homolog (S. cerevisiae)-like
PYGM phosphorylase, glycogen, muscle
RAMP3 receptor (G protein-coupled) activity modifying protein 3
RASIP1 Ras interacting protein 1
RBP1 retinol binding protein 1, cellular
RLBP1 retinaldehyde binding protein 1
RPL39L ribosomal protein L39-like
RPUSD2 RNA pseudouridylate synthase domain containing 2
RRP9 ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)
SETMAR SET domain and mariner transposase fusion gene
SGK2 serum/glucocorticoid regulated kinase 2
SLC30A1 solute carrier family 30 (zinc transporter), member 1
SLC34A2 solute carrier family 34 (type II sodium/phosphate cotransporter), member 2
SLC39A4 solute carrier family 39 (zinc transporter), member 4
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5
SMAD5-AS1 SMAD5 antisense RNA 1
SNORA21 small nucleolar RNA, H/ACA box 21
SPEF1 sperm flagellar 1
SPON2 spondin 2, extracellular matrix protein
SSSCA1 Sjogren syndrome/scleroderma autoantigen 1
STRA6 stimulated by retinoic acid 6
SUSD4 sushi domain containing 4
SUSD6 sushi domain containing 6
TAS2R1 taste receptor, type 2, member 1
TCEAL1 transcription elongation factor A (SII)-like 1
TMA16 translation machinery associated 16 homolog (S. cerevisiae)
TMEM180 transmembrane protein 180
TSPO2 translocator protein 2
TULP4 tubby like protein 4
UTP20 UTP20, small subunit (SSU) processome component, homolog (yeast)
WDR46 WD repeat domain 46