transitional cell carcinoma cell Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description Cancer that forms in transitional cells in the lining of the bladder, ureter, or renal pelvis. Transitional cells are cells that can change shape and stretch without breaking apart. (BRENDA Tissue and Enzyme Source Ontology, BTO_0002815)
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Genes

295 proteins co-occuring with the tissue transitional cell carcinoma cell in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
ALKBH8 alkB, alkylation repair homolog 8 (E. coli) 1.44868
LZTS1 leucine zipper, putative tumor suppressor 1 1.32867
ALKBH2 alkB, alkylation repair homolog 2 (E. coli) 1.22514
UBE2M ubiquitin-conjugating enzyme E2M 1.05061
ALKBH3 alkB, alkylation repair homolog 3 (E. coli) 1.0282
RSF1 remodeling and spacing factor 1 0.966793
CLINT1 clathrin interactor 1 0.919916
MAP1S microtubule-associated protein 1S 0.914361
HMGB1 high mobility group box 1 0.89902
ALKBH1 alkB, alkylation repair homolog 1 (E. coli) 0.894346
HEPACAM hepatic and glial cell adhesion molecule 0.865999
CPEB1 cytoplasmic polyadenylation element binding protein 1 0.83951
LEMD3 LEM domain containing 3 0.708041
FGFR3 fibroblast growth factor receptor 3 0.705993
CD74 CD74 molecule, major histocompatibility complex, class II invariant chain 0.705993
FZD8 frizzled class receptor 8 0.702308
KRT20 keratin 20, type I 0.686776
MTOR mechanistic target of rapamycin (serine/threonine kinase) 0.660304
ELAVL3 ELAV like neuron-specific RNA binding protein 3 0.655024
MZF1 myeloid zinc finger 1 0.63638
HDAC8 histone deacetylase 8 0.633953
CDH1 cadherin 1, type 1, E-cadherin (epithelial) 0.598871
SCGB1D1 secretoglobin, family 1D, member 1 0.573217
PINX1 PIN2/TERF1 interacting, telomerase inhibitor 1 0.556865
CDKN2A cyclin-dependent kinase inhibitor 2A 0.539
TP53 tumor protein p53 0.534647
CASP3 caspase 3, apoptosis-related cysteine peptidase 0.52556
PIGF phosphatidylinositol glycan anchor biosynthesis, class F 0.512564
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1) 0.507849
ABCB6 ATP-binding cassette, sub-family B (MDR/TAP), member 6 (Langereis blood group) 0.505102
NR1I2 nuclear receptor subfamily 1, group I, member 2 0.486716
CDC25C cell division cycle 25C 0.473092
CXCL3 chemokine (C-X-C motif) ligand 3 0.461852
MTA1 metastasis associated 1 0.445268
FRS2 fibroblast growth factor receptor substrate 2 0.436055
CCL20 chemokine (C-C motif) ligand 20 0.431077
CCND1 cyclin D1 0.42993
PTK2B protein tyrosine kinase 2 beta 0.415434
TNFRSF12A tumor necrosis factor receptor superfamily, member 12A 0.412391
DAPK1 death-associated protein kinase 1 0.41087
HIST1H2AJ histone cluster 1, H2aj 0.410111
HIST1H2AD histone cluster 1, H2ad 0.410111
HIST1H2AH histone cluster 1, H2ah 0.409731
H2AFJ H2A histone family, member J 0.408592
H2AFY2 H2A histone family, member Y2 0.406694
HIST1H2AM histone cluster 1, H2am 0.404797
H2AFB1 H2A histone family, member B1 0.404418
H2AFV H2A histone family, member V 0.404039
H2AFB2 H2A histone family, member B2 0.404039
HIST1H2AG histone cluster 1, H2ag 0.402901
MIR145 microRNA 145 0.397222
HIST1H2AB histone cluster 1, H2ab 0.397222
HIST1H2AE histone cluster 1, H2ae 0.397222
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.394576
MARK3 MAP/microtubule affinity-regulating kinase 3 0.382884
GREM2 gremlin 2, DAN family BMP antagonist 0.381379
H2AFY H2A histone family, member Y 0.377996
RNGTT RNA guanylyltransferase and 5'-phosphatase 0.370121
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.363766
TLR6 toll-like receptor 6 0.363393
TK1 thymidine kinase 1, soluble 0.354826
FGF1 fibroblast growth factor 1 (acidic) 0.354084
OIT3 oncoprotein induced transcript 3 0.352227
MMP9 matrix metallopeptidase 9 0.352227
PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent) 0.351114
FSCN3 fascin actin-bundling protein 3, testicular 0.344449
CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) 0.34334
RPTOR regulatory associated protein of MTOR, complex 1 0.341495
FGFR1 fibroblast growth factor receptor 1 0.335968
FSCN2 fascin actin-bundling protein 2, retinal 0.332294
PHB prohibitin 0.323144
FAM195A family with sequence similarity 195, member A 0.319498
MSI2 musashi RNA-binding protein 2 0.316951
VEGFA vascular endothelial growth factor A 0.308612
PODN podocan 0.306805
CEBPD CCAAT/enhancer binding protein (C/EBP), delta 0.28213
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.278603
FECH ferrochelatase 0.275094
POU5F1 POU class 5 homeobox 1 0.273346
SFRP1 secreted frizzled-related protein 1 0.260606
MUC1 mucin 1, cell surface associated 0.250953
CD44 CD44 molecule (Indian blood group) 0.235457
ELAVL1 ELAV like RNA binding protein 1 0.232317
FASLG Fas ligand (TNF superfamily, member 6) 0.229568
AR androgen receptor 0.229568
NOX1 NADPH oxidase 1 0.229299
GLI1 GLI family zinc finger 1 0.229032
ERBB4 erb-b2 receptor tyrosine kinase 4 0.222699
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.219264
HRAS Harvey rat sarcoma viral oncogene homolog 0.217139
PLAU plasminogen activator, urokinase 0.214576
RASSF1 Ras association (RalGDS/AF-6) domain family member 1 0.214017
BIRC5 baculoviral IAP repeat containing 5 0.194576
UPK2 uroplakin 2 0.192449
IFNA2 interferon, alpha 2 0.19233
MYEOV myeloma overexpressed 0.191052
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.187398
ART1 ADP-ribosyltransferase 1 0.187263
UPK1B uroplakin 1B 0.187159
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.187133
C1QTNF6 C1q and tumor necrosis factor related protein 6 0.185742
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.185538
UPK3B uroplakin 3B 0.18546
KCNK10 potassium channel, two pore domain subfamily K, member 10 0.184777
NF2 neurofibromin 2 (merlin) 0.184649
EGFR epidermal growth factor receptor 0.184551
IFNA6 interferon, alpha 6 0.184216
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase 0.184114
HGS hepatocyte growth factor-regulated tyrosine kinase substrate 0.182482
CNOT1 CCR4-NOT transcription complex, subunit 1 0.182466
F7 coagulation factor VII (serum prothrombin conversion accelerator) 0.182182
PLEKHB1 pleckstrin homology domain containing, family B (evectins) member 1 0.182079
HAT1 histone acetyltransferase 1 0.181868
FNBP1 formin binding protein 1 0.181629
POU6F1 POU class 6 homeobox 1 0.180928
EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 0.180754
PRAMEF12 PRAME family member 12 0.180462
MUC7 mucin 7, secreted 0.17983
CXCL8 chemokine (C-X-C motif) ligand 8 0.17951
ESR1 estrogen receptor 1 0.179489
UPK3A uroplakin 3A 0.179462
STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 0.179168
PPARG peroxisome proliferator-activated receptor gamma 0.179168
CTSB cathepsin B 0.178693
LOX lysyl oxidase 0.17774
CRBN cereblon 0.177519
IFNB1 interferon, beta 1, fibroblast 0.177519
EFNA1 ephrin-A1 0.177488
SKP2 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase 0.17715
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 0.176476
ODF1 outer dense fiber of sperm tails 1 0.176018
TSPO translocator protein (18kDa) 0.175444
ROCK1P1 Rho-associated, coiled-coil containing protein kinase 1 pseudogene 1 0.17516
HBEGF heparin-binding EGF-like growth factor 0.175057
EREG epiregulin 0.174074
MET MET proto-oncogene, receptor tyrosine kinase 0.174034
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.173995
HIPK2 homeodomain interacting protein kinase 2 0.173895
RPE ribulose-5-phosphate-3-epimerase 0.173755
CCL22 chemokine (C-C motif) ligand 22 0.173714
COX5A cytochrome c oxidase subunit Va 0.173519
IFNA1 interferon, alpha 1 0.173273
F3 coagulation factor III (thromboplastin, tissue factor) 0.17303
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.17258
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 0.172526
MT3 metallothionein 3 0.17245
POU3F3 POU class 3 homeobox 3 0.172341
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 0.17203
NRG2 neuregulin 2 0.171715
CCNB1 cyclin B1 0.171102
UPK1A uroplakin 1A 0.170779
CDK2 cyclin-dependent kinase 2 0.170731
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.170084
MIR10A microRNA 10a 0.170072
TACC3 transforming, acidic coiled-coil containing protein 3 0.170022
MAP2K3 mitogen-activated protein kinase kinase 3 0.169746
HPGD hydroxyprostaglandin dehydrogenase 15-(NAD) 0.169695
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.169466
TRIP10 thyroid hormone receptor interactor 10 0.168998
HMBS hydroxymethylbilane synthase 0.168919
SH3GL2 SH3-domain GRB2-like 2 0.16884
BAX BCL2-associated X protein 0.168735
SAA4 serum amyloid A4, constitutive 0.168683
FAXDC2 fatty acid hydroxylase domain containing 2 0.168358
TPX2 TPX2, microtubule-associated 0.167073
THBS1 thrombospondin 1 0.165816
ERV3-1 endogenous retrovirus group 3, member 1 0.165462
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.165027
FOXO3 forkhead box O3 0.164629
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D 0.16439
PPARD peroxisome proliferator-activated receptor delta 0.164275
UNC5B unc-5 homolog B (C. elegans) 0.164095
APAF1 apoptotic peptidase activating factor 1 0.163651
IDO1 indoleamine 2,3-dioxygenase 1 0.163263
ANXA5 annexin A5 0.163195
POU3F2 POU class 3 homeobox 2 0.162649
CDK1 cyclin-dependent kinase 1 0.161352
S100A11 S100 calcium binding protein A11 0.161226
EPHA2 EPH receptor A2 0.161226
NBPF8 neuroblastoma breakpoint family, member 8 0.16056
NR2C2 nuclear receptor subfamily 2, group C, member 2 0.160373
DHCR24 24-dehydrocholesterol reductase 0.160336
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein 0.159418
PODXL podocalyxin-like 0.159264
OR2AG1 olfactory receptor, family 2, subfamily AG, member 1 (gene/pseudogene) 0.158948
EPAS1 endothelial PAS domain protein 1 0.158629
TFRC transferrin receptor 0.15855
KRT7 keratin 7, type II 0.15815
IL21 interleukin 21 0.158129
CPM carboxypeptidase M 0.157903
TNFRSF10A tumor necrosis factor receptor superfamily, member 10a 0.155447
MSN moesin 0.154286
ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 0.154061
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.153597
AREG amphiregulin 0.153319
FGF9 fibroblast growth factor 9 0.153226
ARHGAP35 Rho GTPase activating protein 35 0.153134
PLG plasminogen 0.153087
GPI glucose-6-phosphate isomerase 0.152948
RB1 retinoblastoma 1 0.152948
CLEC3A C-type lectin domain family 3, member A 0.152543
DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) 0.152089
TYMP thymidine phosphorylase 0.151946
LTA lymphotoxin alpha 0.151385
IL1A interleukin 1, alpha 0.151139
CLEC2B C-type lectin domain family 2, member B 0.150893
CLEC10A C-type lectin domain family 10, member A 0.150696
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 0.150672
DUSP1 dual specificity phosphatase 1 0.150523
BCL2 B-cell CLL/lymphoma 2 0.149788
ZYX zyxin 0.149459
TRPV2 transient receptor potential cation channel, subfamily V, member 2 0.149306
AMFR autocrine motility factor receptor, E3 ubiquitin protein ligase 0.14915
IL6 interleukin 6 0.148967
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 0.14816
FLT4 fms-related tyrosine kinase 4 0.14816
DKK3 dickkopf WNT signaling pathway inhibitor 3 0.148001
CASP10 caspase 10, apoptosis-related cysteine peptidase 0.147304
PRIMA1 proline rich membrane anchor 1 0.147197
LPO lactoperoxidase 0.146548
REST RE1-silencing transcription factor 0.145446
KRT13 keratin 13, type I 0.144654
AQP7 aquaporin 7 0.144371
LALBA lactalbumin, alpha- 0.143565
DACH1 dachshund family transcription factor 1 0.143565
BTG2 BTG family, member 2 0.143449
CYBB cytochrome b-245, beta polypeptide 0.143333
NUMA1 nuclear mitotic apparatus protein 1 0.143333
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.1431
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.142217
CFLAR CASP8 and FADD-like apoptosis regulator 0.14174
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 0.141442
PTGER4 prostaglandin E receptor 4 (subtype EP4) 0.141323
EDNRB endothelin receptor type B 0.14102
KRT18 keratin 18, type I 0.140684
SIRT1 sirtuin 1 0.139889
MIF macrophage migration inhibitory factor (glycosylation-inhibiting factor) 0.139705
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.139391
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1) 0.138827
NCOR1 nuclear receptor corepressor 1 0.138545
C4A complement component 4A (Rodgers blood group) 0.137847
SOCS3 suppressor of cytokine signaling 3 0.137526
CXCL10 chemokine (C-X-C motif) ligand 10 0.137333
HAS2 hyaluronan synthase 2 0.136496
ICAM1 intercellular adhesion molecule 1 0.13551
HAS1 hyaluronan synthase 1 0.134277
DNTT DNA nucleotidylexotransferase 0.133025
PDPN podoplanin 0.132029
IGHV3-30 immunoglobulin heavy variable 3-30 0.130175
VEGFC vascular endothelial growth factor C 0.128134
KCNK9 potassium channel, two pore domain subfamily K, member 9 0.127988
NQO1 NAD(P)H dehydrogenase, quinone 1 0.123113
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.122616
SERPINC1 serpin peptidase inhibitor, clade C (antithrombin), member 1 0.122539
POR P450 (cytochrome) oxidoreductase 0.1225
EDNRA endothelin receptor type A 0.120135
SRSF1 serine/arginine-rich splicing factor 1 0.118042
PARP1 poly (ADP-ribose) polymerase 1 0.116118
CASP9 caspase 9, apoptosis-related cysteine peptidase 0.114657
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A 0.114411
GSR glutathione reductase 0.113552
CAT catalase 0.112064
ESR2 estrogen receptor 2 (ER beta) 0.110775
MMP1 matrix metallopeptidase 1 0.110733
PRSS8 protease, serine, 8 0.110313
MMP2 matrix metallopeptidase 2 0.1096
FGFR2 fibroblast growth factor receptor 2 0.108672
SOD2 superoxide dismutase 2, mitochondrial 0.108417
F2 coagulation factor II (thrombin) 0.107951
PROS1 protein S (alpha) 0.107146
CD40LG CD40 ligand 0.103448
IL4 interleukin 4 0.100706
TNF tumor necrosis factor 0.100618
EDN1 endothelin 1 0.100003
TYR tyrosinase 0.099476
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.097759
MRE11A MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 0.097715
TF transferrin 0.097494
CKB creatine kinase, brain 0.097229
FLT1 fms-related tyrosine kinase 1 0.097185
WEE1 WEE1 G2 checkpoint kinase 0.096788
RFXANK regulatory factor X-associated ankyrin-containing protein 0.096744
RNASEL ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent) 0.095501
DNM2 dynamin 2 0.095412
SPINK1 serine peptidase inhibitor, Kazal type 1 0.095412
MPZ myelin protein zero 0.095234
IL1B interleukin 1, beta 0.094747
KRT8 keratin 8, type II 0.094348
RARB retinoic acid receptor, beta 0.093678
FOXA1 forkhead box A1 0.093678
SRC SRC proto-oncogene, non-receptor tyrosine kinase 0.09341
SIRT2 sirtuin 2 0.093276
CD68 CD68 molecule 0.093098
FOXP3 forkhead box P3 0.092964
HDAC4 histone deacetylase 4 0.09292