transitional cell carcinoma cell line Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
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Genes

226 proteins co-occuring with the tissue transitional cell carcinoma cell line in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
UPK2 uroplakin 2 1.4011
TP53 tumor protein p53 1.09651
ART1 ADP-ribosyltransferase 1 1.00065
CDH1 cadherin 1, type 1, E-cadherin (epithelial) 0.994554
UPK1B uroplakin 1B 0.994554
EGFR epidermal growth factor receptor 0.931908
C1QTNF6 C1q and tumor necrosis factor related protein 6 0.917779
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.907535
BIRC5 baculoviral IAP repeat containing 5 0.906256
UPK3B uroplakin 3B 0.903275
NF2 neurofibromin 2 (merlin) 0.864734
IFNA6 interferon, alpha 6 0.845805
ELAVL3 ELAV like neuron-specific RNA binding protein 3 0.802293
HGS hepatocyte growth factor-regulated tyrosine kinase substrate 0.774834
MYEOV myeloma overexpressed 0.751645
FNBP1 formin binding protein 1 0.744214
POU6F1 POU class 6 homeobox 1 0.719934
PODN podocan 0.717472
PRAMEF12 PRAME family member 12 0.704764
CASP3 caspase 3, apoptosis-related cysteine peptidase 0.689634
MUC7 mucin 7, secreted 0.685143
UPK3A uroplakin 3A 0.674135
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1) 0.673321
STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 0.665995
UPK1A uroplakin 1A 0.642454
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 0.639214
HEPACAM hepatic and glial cell adhesion molecule 0.636785
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase 0.628293
LOX lysyl oxidase 0.627081
CRBN cereblon 0.621024
IFNB1 interferon, beta 1, fibroblast 0.621024
CCNB1 cyclin B1 0.615377
SKP2 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase 0.61175
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.601283
ODF1 outer dense fiber of sperm tails 1 0.585224
RASSF1 Ras association (RalGDS/AF-6) domain family member 1 0.572418
HBEGF heparin-binding EGF-like growth factor 0.563637
EREG epiregulin 0.543359
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.541773
HIPK2 homeodomain interacting protein kinase 2 0.539793
RPE ribulose-5-phosphate-3-epimerase 0.537021
CCL22 chemokine (C-C motif) ligand 22 0.536625
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.514924
POU3F3 POU class 3 homeobox 3 0.510599
FAM195A family with sequence similarity 195, member A 0.506279
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 0.505102
NRG2 neuregulin 2 0.500007
F7 coagulation factor VII (serum prothrombin conversion accelerator) 0.498048
MTOR mechanistic target of rapamycin (serine/threonine kinase) 0.496874
FGFR3 fibroblast growth factor receptor 3 0.495309
ROCK1P1 Rho-associated, coiled-coil containing protein kinase 1 pseudogene 1 0.494918
PLEKHB1 pleckstrin homology domain containing, family B (evectins) member 1 0.494528
TYMP thymidine phosphorylase 0.4914
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.483986
CDK2 cyclin-dependent kinase 2 0.483206
MIR10A microRNA 10a 0.473092
TACC3 transforming, acidic coiled-coil containing protein 3 0.471927
MAP2K3 mitogen-activated protein kinase kinase 3 0.46766
HPGD hydroxyprostaglandin dehydrogenase 15-(NAD) 0.466885
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.4634
FGFR1 fibroblast growth factor receptor 1 0.463013
TRIP10 thyroid hormone receptor interactor 10 0.456828
HMBS hydroxymethylbilane synthase 0.45567
SH3GL2 SH3-domain GRB2-like 2 0.454126
SAA4 serum amyloid A4, constitutive 0.452198
FAXDC2 fatty acid hydroxylase domain containing 2 0.447192
PPARG peroxisome proliferator-activated receptor gamma 0.446807
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 0.444115
KCNK10 potassium channel, two pore domain subfamily K, member 10 0.440274
HRAS Harvey rat sarcoma viral oncogene homolog 0.43414
IFNA2 interferon, alpha 2 0.43146
TPX2 TPX2, microtubule-associated 0.42993
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.419242
KRT7 keratin 7, type II 0.415814
ESR1 estrogen receptor 1 0.414293
CNOT1 CCR4-NOT transcription complex, subunit 1 0.412391
ERV3-1 endogenous retrovirus group 3, member 1 0.409351
CTSB cathepsin B 0.404797
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.40366
MET MET proto-oncogene, receptor tyrosine kinase 0.40328
SRSF1 serine/arginine-rich splicing factor 1 0.40328
MMP2 matrix metallopeptidase 2 0.402901
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D 0.396087
PPARD peroxisome proliferator-activated receptor delta 0.394953
UNC5B unc-5 homolog B (C. elegans) 0.392686
IDO1 indoleamine 2,3-dioxygenase 1 0.383637
ANXA5 annexin A5 0.382508
POU3F2 POU class 3 homeobox 2 0.376494
CDK1 cyclin-dependent kinase 1 0.36302
S100A11 S100 calcium binding protein A11 0.361527
BAX BCL2-associated X protein 0.358919
NBPF8 neuroblastoma breakpoint family, member 8 0.354826
DHCR24 24-dehydrocholesterol reductase 0.352969
NR2C2 nuclear receptor subfamily 2, group C, member 2 0.352969
FASLG Fas ligand (TNF superfamily, member 6) 0.350372
TSPO translocator protein (18kDa) 0.34334
PODXL podocalyxin-like 0.342233
OR2AG1 olfactory receptor, family 2, subfamily AG, member 1 (gene/pseudogene) 0.33965
EPAS1 endothelial PAS domain protein 1 0.336704
ESR2 estrogen receptor 2 (ER beta) 0.336336
PRSS8 protease, serine, 8 0.332294
CPM carboxypeptidase M 0.329727
IL6 interleukin 6 0.326432
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.323509
APAF1 apoptotic peptidase activating factor 1 0.320956
IFNA1 interferon, alpha 1 0.316951
TNFRSF10A tumor necrosis factor receptor superfamily, member 10a 0.308612
TNF tumor necrosis factor 0.301398
MSN moesin 0.299601
ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 0.297806
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.293866
AREG amphiregulin 0.291722
ARHGAP35 Rho GTPase activating protein 35 0.290652
PLG plasminogen 0.289939
GPI glucose-6-phosphate isomerase 0.28887
RB1 retinoblastoma 1 0.28887
HAT1 histone acetyltransferase 1 0.284253
COX5A cytochrome c oxidase subunit Va 0.283899
DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) 0.282483
NR1I2 nuclear receptor subfamily 1, group I, member 2 0.278955
CCND1 cyclin D1 0.278603
F3 coagulation factor III (thromboplastin, tissue factor) 0.275444
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 0.2723
DUSP1 dual specificity phosphatase 1 0.271604
IL1B interleukin 1, beta 0.269174
MT3 metallothionein 3 0.266069
ZYX zyxin 0.264011
TRPV2 transient receptor potential cation channel, subfamily V, member 2 0.262986
AMFR autocrine motility factor receptor, E3 ubiquitin protein ligase 0.261964
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 0.255567
FGA fibrinogen alpha chain 0.255234
DKK3 dickkopf WNT signaling pathway inhibitor 3 0.254902
CASP10 caspase 10, apoptosis-related cysteine peptidase 0.250301
EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 0.249977
PRIMA1 proline rich membrane anchor 1 0.249653
LPO lactoperoxidase 0.245807
REST RE1-silencing transcription factor 0.23961
ERBB4 erb-b2 receptor tyrosine kinase 4 0.236332
KRT13 keratin 13, type I 0.235457
AQP7 aquaporin 7 0.234016
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.233731
DACH1 dachshund family transcription factor 1 0.230382
BTG2 BTG family, member 2 0.229839
CYBB cytochrome b-245, beta polypeptide 0.229032
NUMA1 nuclear mitotic apparatus protein 1 0.229032
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.22797
RFXANK regulatory factor X-associated ankyrin-containing protein 0.226155
BCL2 B-cell CLL/lymphoma 2 0.225647
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.22415
CFLAR CASP8 and FADD-like apoptosis regulator 0.22246
PTGER4 prostaglandin E receptor 4 (subtype EP4) 0.220604
DAPK1 death-associated protein kinase 1 0.21883
KRT18 keratin 18, type I 0.218398
EFNA1 ephrin-A1 0.21673
ICAM1 intercellular adhesion molecule 1 0.214202
CXCL8 chemokine (C-X-C motif) ligand 8 0.181789
THBS1 thrombospondin 1 0.169433
FOXO3 forkhead box O3 0.168352
EPHA2 EPH receptor A2 0.165236
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein 0.163567
IL21 interleukin 21 0.162367
HMGB1 high mobility group box 1 0.160817
FGF9 fibroblast growth factor 9 0.157772
CLEC3A C-type lectin domain family 3, member A 0.157129
LTA lymphotoxin alpha 0.156029
IL1A interleukin 1, alpha 0.155794
MMP9 matrix metallopeptidase 9 0.15563
CLEC2B C-type lectin domain family 2, member B 0.155559
CLEC10A C-type lectin domain family 10, member A 0.155371
FLT4 fms-related tyrosine kinase 4 0.152947
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.151472
LALBA lactalbumin, alpha- 0.148502
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 0.146427
EDNRB endothelin receptor type B 0.146011
SIRT1 sirtuin 1 0.1449
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.144412
NCOR1 nuclear receptor corepressor 1 0.143576
C4A complement component 4A (Rodgers blood group) 0.142888
SOCS3 suppressor of cytokine signaling 3 0.142573
CXCL10 chemokine (C-X-C motif) ligand 10 0.14238
HAS2 hyaluronan synthase 2 0.141545
HAS1 hyaluronan synthase 1 0.139338
DNTT DNA nucleotidylexotransferase 0.138087
PDPN podoplanin 0.137084
IGHV3-30 immunoglobulin heavy variable 3-30 0.135219
VEGFC vascular endothelial growth factor C 0.133155
KCNK9 potassium channel, two pore domain subfamily K, member 9 0.133006
NQO1 NAD(P)H dehydrogenase, quinone 1 0.128038
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.127527
SERPINC1 serpin peptidase inhibitor, clade C (antithrombin), member 1 0.127448
POR P450 (cytochrome) oxidoreductase 0.127409
EDNRA endothelin receptor type A 0.124982
CASP9 caspase 9, apoptosis-related cysteine peptidase 0.11931
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A 0.119056
GSR glutathione reductase 0.118156
CAT catalase 0.116605
MMP1 matrix metallopeptidase 1 0.115215
FGFR2 fibroblast growth factor receptor 2 0.113053
SOD2 superoxide dismutase 2, mitochondrial 0.112785
F2 coagulation factor II (thrombin) 0.112294
PROS1 protein S (alpha) 0.111446
TFRC transferrin receptor 0.109868
AR androgen receptor 0.109642
CD40LG CD40 ligand 0.107547
IL4 interleukin 4 0.104641
EDN1 endothelin 1 0.103896
FGF1 fibroblast growth factor 1 (acidic) 0.103338
TYR tyrosinase 0.103338
PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent) 0.101464
MRE11A MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 0.101464
PLAU plasminogen activator, urokinase 0.10123
CKB creatine kinase, brain 0.100948
FLT1 fms-related tyrosine kinase 1 0.100902
WEE1 WEE1 G2 checkpoint kinase 0.100476
RNASEL ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent) 0.099105
SPINK1 serine peptidase inhibitor, Kazal type 1 0.099011
DNM2 dynamin 2 0.099011
MPZ myelin protein zero 0.098822
KRT8 keratin 8, type II 0.097871
RARB retinoic acid receptor, beta 0.097158
FOXA1 forkhead box A1 0.097158
SRC SRC proto-oncogene, non-receptor tyrosine kinase 0.096873
SIRT2 sirtuin 2 0.09673
CD68 CD68 molecule 0.09654
FOXP3 forkhead box P3 0.096397
HDAC4 histone deacetylase 4 0.096349