transcription factor complex Gene Set

Dataset COMPARTMENTS Curated Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A protein complex that is capable of associating with DNA by direct binding, or via other DNA-binding proteins or complexes, and regulating transcription. (Gene Ontology, GO_0005667)
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Genes

244 proteins localized to the transcription factor complex cellular component from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
KAT2A K(lysine) acetyltransferase 2A 0.663342
GCM1 glial cells missing homolog 1 (Drosophila) 0.663342
EPAS1 endothelial PAS domain protein 1 0.663342
ERCC3 excision repair cross-complementation group 3 0.663342
ERCC2 excision repair cross-complementation group 2 0.663342
MED27 mediator complex subunit 27 0.663342
SNAPC4 small nuclear RNA activating complex, polypeptide 4, 190kDa 0.663342
FIGLA folliculogenesis specific basic helix-loop-helix 0.663342
TBPL1 TBP-like 1 0.663342
FOXE3 forkhead box E3 0.663342
PITX2 paired-like homeodomain 2 0.663342
TRRAP transformation/transcription domain-associated protein 0.663342
TBP TATA box binding protein 0.663342
TAF7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa 0.663342
TADA3 transcriptional adaptor 3 0.663342
MED23 mediator complex subunit 23 0.663342
MED7 mediator complex subunit 7 0.663342
SNF8 SNF8, ESCRT-II complex subunit 0.663342
TAF5L TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa 0.663342
BRF1 BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit 0.663342
TAF1B TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa 0.663342
ASCC1 activating signal cointegrator 1 complex subunit 1 0.663342
TCF3 transcription factor 3 0.663342
NAA15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit 0.663342
SMAD3 SMAD family member 3 0.663342
MED17 mediator complex subunit 17 0.663342
SCX scleraxis basic helix-loop-helix transcription factor 0.663342
HMGA1 high mobility group AT-hook 1 0.663342
CCNH cyclin H 0.663342
LMO4 LIM domain only 4 0.663342
TAF6 TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 0.663342
SUB1 SUB1 homolog (S. cerevisiae) 0.663342
NFYB nuclear transcription factor Y, beta 0.663342
NFYC nuclear transcription factor Y, gamma 0.663342
ZFHX3 zinc finger homeobox 3 0.663342
TAF9 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa 0.663342
FOXF2 forkhead box F2 0.663342
TAF2 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa 0.663342
MMS19 MMS19 nucleotide excision repair homolog (S. cerevisiae) 0.663342
TAF13 TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa 0.663342
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.663342
TAF12 TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa 0.663342
TAF11 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa 0.663342
TAF10 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa 0.663342
TAF9B TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa 0.663342
NCOA6 nuclear receptor coactivator 6 0.663342
NFYA nuclear transcription factor Y, alpha 0.663342
TAF8 TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa 0.663342
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) 0.663342
TAF5 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa 0.663342
TAF4 TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa 0.663342
CDK7 cyclin-dependent kinase 7 0.663342
TAF3 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa 0.663342
MNAT1 MNAT CDK-activating kinase assembly factor 1 0.663342
GTF2H4 general transcription factor IIH, polypeptide 4, 52kDa 0.663342
GTF2H1 general transcription factor IIH, polypeptide 1, 62kDa 0.663342
GTF2H2 general transcription factor IIH, polypeptide 2, 44kDa 0.663342
ING2 inhibitor of growth family, member 2 0.663342
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A 0.663342
GTF2H3 general transcription factor IIH, polypeptide 3, 34kDa 0.663342
MLXIPL MLX interacting protein-like 0.663342
NPAS2 neuronal PAS domain protein 2 0.237908
HAX1 HCLS1 associated protein X-1 0.237908
GTF2A1 general transcription factor IIA, 1, 19/37kDa 0.237908
POU5F1 POU class 5 homeobox 1 0.237908
PARP1 poly (ADP-ribose) polymerase 1 0.237908
CD3EAP CD3e molecule, epsilon associated protein 0.237908
GTF2A2 general transcription factor IIA, 2, 12kDa 0.237908
NAA16 N(alpha)-acetyltransferase 16, NatA auxiliary subunit 0.237908
SOX2 SRY (sex determining region Y)-box 2 0.237908
SIX1 SIX homeobox 1 0.237908
E2F1 E2F transcription factor 1 0.237908
GTF3C3 general transcription factor IIIC, polypeptide 3, 102kDa 0.237908
GTF3C2 general transcription factor IIIC, polypeptide 2, beta 110kDa 0.237908
LEF1 lymphoid enhancer-binding factor 1 0.237908
IVNS1ABP influenza virus NS1A binding protein 0.237908
LDB1 LIM domain binding 1 0.237908
GATA1 GATA binding protein 1 (globin transcription factor 1) 0.237908
RBM14 RNA binding motif protein 14 0.237908
HES6 hes family bHLH transcription factor 6 0.237908
SOX17 SRY (sex determining region Y)-box 17 0.237908
SMAD4 SMAD family member 4 0.237908
MTA2 metastasis associated 1 family, member 2 0.237908
PMF1 polyamine-modulated factor 1 0.237908
RBM4 RNA binding motif protein 4 0.237908
TAL1 T-cell acute lymphocytic leukemia 1 0.237908
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.237908
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.237908
LMO2 LIM domain only 2 (rhombotin-like 1) 0.237908
USF1 upstream transcription factor 1 0.237908
CLOCK clock circadian regulator 0.237908
TAF1 TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa 0.237908
KDM1A lysine (K)-specific demethylase 1A 0.237908
AHR aryl hydrocarbon receptor 0.237908
GTF2F1 general transcription factor IIF, polypeptide 1, 74kDa 0.237908
NHLH2 nescient helix loop helix 2 0.237908
BEX1 brain expressed, X-linked 1 0.237908
SMAD2 SMAD family member 2 0.237908
RB1 retinoblastoma 1 0.237908
FOXF1 forkhead box F1 0.237908
ARNTL aryl hydrocarbon receptor nuclear translocator-like 0.237908
NR6A1 nuclear receptor subfamily 6, group A, member 1 0.237908
HDAC9 histone deacetylase 9 0.237908
ZFPM1 zinc finger protein, FOG family member 1 0.237908
GFI1B growth factor independent 1B transcription repressor 0.237908
GTF3C1 general transcription factor IIIC, polypeptide 1, alpha 220kDa 0.237908
GTF3C6 general transcription factor IIIC, polypeptide 6, alpha 35kDa 0.237908
HOXA11 homeobox A11 0.237908
GTF3C5 general transcription factor IIIC, polypeptide 5, 63kDa 0.237908
GTF3C4 general transcription factor IIIC, polypeptide 4, 90kDa 0.237908
PTF1A pancreas specific transcription factor, 1a 0.237908
FOXH1 forkhead box H1 0.237908
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.237908
HCLS1 hematopoietic cell-specific Lyn substrate 1 0.237908
MYOG myogenin (myogenic factor 4) 0.098109
SKI SKI proto-oncogene 0.098109
HAND2 heart and neural crest derivatives expressed 2 0.098109
TP63 tumor protein p63 0.098109
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.098109
TCF7L1 transcription factor 7-like 1 (T-cell specific, HMG-box) 0.098109
TP73 tumor protein p73 0.098109
NKX2-5 NK2 homeobox 5 0.098109
RARG retinoic acid receptor, gamma 0.098109
TCF4 transcription factor 4 0.098109
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.098109
MYOD1 myogenic differentiation 1 0.098109
TCF7 transcription factor 7 (T-cell specific, HMG-box) 0.098109
NFATC4 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4 0.03318
E2F2 E2F transcription factor 2 0.03318
LDB2 LIM domain binding 2 0.03318
HELT helt bHLH transcription factor 0.03318
RBL2 retinoblastoma-like 2 0.03318
RBL1 retinoblastoma-like 1 0.03318
E2F8 E2F transcription factor 8 0.03318
HOXA10 homeobox A10 0.03318
NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 0.03318
GTF2A1L general transcription factor IIA, 1-like 0.03318
SATB2 SATB homeobox 2 0.03318
ALX1 ALX homeobox 1 0.03318
E2F3 E2F transcription factor 3 0.03318
ECSIT ECSIT signalling integrator 0.03318
ERCC1 excision repair cross-complementation group 1 0.03318
TBX5 T-box 5 0.03318
PROP1 PROP paired-like homeobox 1 0.03318
FOS FBJ murine osteosarcoma viral oncogene homolog 0.03318
PKNOX1 PBX/knotted 1 homeobox 1 0.03318
E2F6 E2F transcription factor 6 0.03318
YAP1 Yes-associated protein 1 0.03318
ALX4 ALX homeobox 4 0.03318
E2F5 E2F transcription factor 5, p130-binding 0.03318
E2F4 E2F transcription factor 4, p107/p130-binding 0.03318
CREBBP CREB binding protein 0.03318
NKX2-1 NK2 homeobox 1 0.03318
TAF1L TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like 0.03318
GATA6 GATA binding protein 6 0.03318
ARNT aryl hydrocarbon receptor nuclear translocator 0.03318
RUNX2 runt-related transcription factor 2 0.03318
ZEB1 zinc finger E-box binding homeobox 1 0.03318
LHX3 LIM homeobox 3 0.03318
TAF4B TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa 0.03318
POU2F3 POU class 2 homeobox 3 0.03318
GSC goosecoid homeobox 0.03318
BARX2 BARX homeobox 2 0.03318
RBPJL recombination signal binding protein for immunoglobulin kappa J region-like 0.03318
HNF1B HNF1 homeobox B 0.03318
CDK4 cyclin-dependent kinase 4 0.03318
DMBX1 diencephalon/mesencephalon homeobox 1 0.03318
TAF1A TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa 0.03318
TLE1 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) 0.03318
MSX1 msh homeobox 1 0.03318
MSX2 msh homeobox 2 0.03318
SIN3A SIN3 transcription regulator family member A 0.03318
HOXB13 homeobox B13 0.03318
TBX2 T-box 2 0.03318
CDK2 cyclin-dependent kinase 2 0.03318
MGA MGA, MAX dimerization protein 0.03318
MEIS1 Meis homeobox 1 0.03318
TEAD3 TEA domain family member 3 0.03318
GTF2E2 general transcription factor IIE, polypeptide 2, beta 34kDa 0.03318
AJUBA ajuba LIM protein 0.03318
ONECUT3 one cut homeobox 3 0.03318
TCF12 transcription factor 12 0.03318
ASCL3 achaete-scute family bHLH transcription factor 3 0.03318
SMAD7 SMAD family member 7 0.03318
SMAD6 SMAD family member 6 0.03318
SMAD5 SMAD family member 5 0.03318
SMAD9 SMAD family member 9 0.03318
PITX1 paired-like homeodomain 1 0.03318
EYA3 EYA transcriptional coactivator and phosphatase 3 0.03318
MAFB v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B 0.03318
SNAI3 snail family zinc finger 3 0.03318
DEAF1 DEAF1 transcription factor 0.03318
ARID5A AT rich interactive domain 5A (MRF1-like) 0.03318
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.03318
CREB1 cAMP responsive element binding protein 1 0.03318
SMAD1 SMAD family member 1 0.03318
HOXD12 homeobox D12 0.03318
TFAP2D transcription factor AP-2 delta (activating enhancer binding protein 2 delta) 0.03318
CREM cAMP responsive element modulator 0.03318
POU3F2 POU class 3 homeobox 2 0.03318
POU3F1 POU class 3 homeobox 1 0.03318
NR2E3 nuclear receptor subfamily 2, group E, member 3 0.03318
PUS1 pseudouridylate synthase 1 0.03318
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.03318
JUN jun proto-oncogene 0.03318
NPAS4 neuronal PAS domain protein 4 0.03318
GTF2F2 general transcription factor IIF, polypeptide 2, 30kDa 0.03318
TFDP3 transcription factor Dp family, member 3 0.03318
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) 0.03318
TFDP1 transcription factor Dp-1 0.03318
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.03318
PBX2 pre-B-cell leukemia homeobox 2 0.03318
PBX3 pre-B-cell leukemia homeobox 3 0.03318
RCOR2 REST corepressor 2 0.03318
KLF4 Kruppel-like factor 4 (gut) 0.03318
EP300 E1A binding protein p300 0.03318
APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1 0.03318
NCOR1 nuclear receptor corepressor 1 0.03318
SKOR1 SKI family transcriptional corepressor 1 0.03318
CTBP1 C-terminal binding protein 1 0.03318
SRA1 steroid receptor RNA activator 1 0.03318
TAF7L TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa 0.03318
PDLIM1 PDZ and LIM domain 1 0.03318
CREG1 cellular repressor of E1A-stimulated genes 1 0.03318
DACH1 dachshund family transcription factor 1 0.03318
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.03318
ERCC4 excision repair cross-complementation group 4 0.03318
REL v-rel avian reticuloendotheliosis viral oncogene homolog 0.03318
MINA MYC induced nuclear antigen 0.03318
PBX1 pre-B-cell leukemia homeobox 1 0.03318
HDAC2 histone deacetylase 2 0.03318
ARNT2 aryl-hydrocarbon receptor nuclear translocator 2 0.03318
LBX1 ladybird homeobox 1 0.03318
YY1 YY1 transcription factor 0.03318
WWTR1 WW domain containing transcription regulator 1 0.03318
CRX cone-rod homeobox 0.03318
ARNTL2 aryl hydrocarbon receptor nuclear translocator-like 2 0.03318
KAT5 K(lysine) acetyltransferase 5 0.03318
ABT1 activator of basal transcription 1 0.03318
ATF5 activating transcription factor 5 0.03318
ATF4 activating transcription factor 4 0.03318
ATF1 activating transcription factor 1 0.03318
BSX brain-specific homeobox 0.03318
E2F7 E2F transcription factor 7 0.03318