thylakoid membrane Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The pigmented membrane of any thylakoid. (Gene Ontology, GO_0042651)
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Genes

168 proteins co-occuring with the thylakoid membrane cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
BFSP2 beaded filament structural protein 2, phakinin 2.3376
SPX spexin hormone 2.11876
TSPO translocator protein (18kDa) 2.03506
CYP26A1 cytochrome P450, family 26, subfamily A, polypeptide 1 1.99191
YME1L1 YME1-like 1 ATPase 1.71435
ATP5O ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit 1.4774
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 1.35594
MGAM maltase-glucoamylase 1.34174
GPR152 G protein-coupled receptor 152 1.32654
TXN thioredoxin 1.1916
SAMHD1 SAM domain and HD domain 1 1.1803
DNAH8 dynein, axonemal, heavy chain 8 1.08171
UQCRFS1 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 1.05539
FES FES proto-oncogene, tyrosine kinase 1.05337
SRP54 signal recognition particle 54kDa 0.961667
CELSR3 cadherin, EGF LAG seven-pass G-type receptor 3 0.945432
CLEC3A C-type lectin domain family 3, member A 0.921854
CLEC2B C-type lectin domain family 2, member B 0.904602
CLEC10A C-type lectin domain family 10, member A 0.898109
ATP5E ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit 0.890707
RPE ribulose-5-phosphate-3-epimerase 0.883321
EFS embryonal Fyn-associated substrate 0.854339
CLPP caseinolytic mitochondrial matrix peptidase proteolytic subunit 0.834597
FDXR ferredoxin reductase 0.833679
CPA1 carboxypeptidase A1 (pancreatic) 0.741416
FBP1 fructose-1,6-bisphosphatase 1 0.737363
SFTPA1 surfactant protein A1 0.698663
ARPP21 cAMP-regulated phosphoprotein, 21kDa 0.680284
CPA2 carboxypeptidase A2 (pancreatic) 0.64958
CDS2 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 0.612471
SCARA3 scavenger receptor class A, member 3 0.611625
MOSPD3 motile sperm domain containing 3 0.597276
RPIA ribose 5-phosphate isomerase A 0.591812
LAP3 leucine aminopeptidase 3 0.549773
CDSN corneodesmosin 0.548122
SOD2 superoxide dismutase 2, mitochondrial 0.54606
TGM1 transglutaminase 1 0.542352
CLPS colipase, pancreatic 0.53454
CARS cysteinyl-tRNA synthetase 0.526341
CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase 0.523476
SMPX small muscle protein, X-linked 0.521841
CFH complement factor H 0.518165
THEG theg spermatid protein 0.517756
ATP5J ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 0.517348
OVGP1 oviductal glycoprotein 1, 120kDa 0.501476
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.475625
RNH1 ribonuclease/angiogenin inhibitor 1 0.470406
MDH1 malate dehydrogenase 1, NAD (soluble) 0.470005
PECR peroxisomal trans-2-enoyl-CoA reductase 0.468802
JTB jumping translocation breakpoint 0.465998
SMAD4 SMAD family member 4 0.463598
RBSN rabenosyn, RAB effector 0.448848
CTU1 cytosolic thiouridylase subunit 1 0.447656
ARHGEF19 Rho guanine nucleotide exchange factor (GEF) 19 0.444482
CCDC130 coiled-coil domain containing 130 0.443689
ATP12A ATPase, H+/K+ transporting, nongastric, alpha polypeptide 0.439333
ATP4A ATPase, H+/K+ exchanging, alpha polypeptide 0.438146
ATP11A ATPase, class VI, type 11A 0.431829
LARS2 leucyl-tRNA synthetase 2, mitochondrial 0.416902
MDH2 malate dehydrogenase 2, NAD (mitochondrial) 0.41182
PLA2G1B phospholipase A2, group IB (pancreas) 0.410259
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.405582
APC2 adenomatosis polyposis coli 2 0.398587
IMPACT impact RWD domain protein 0.396648
HOXC6 homeobox C6 0.388909
CGA glycoprotein hormones, alpha polypeptide 0.387365
CACNB4 calcium channel, voltage-dependent, beta 4 subunit 0.377354
CAT catalase 0.37697
NOL9 nucleolar protein 9 0.374666
NVL nuclear VCP-like 0.372366
NPDC1 neural proliferation, differentiation and control, 1 0.368153
ZBTB17 zinc finger and BTB domain containing 17 0.367006
FECH ferrochelatase 0.365095
NFYB nuclear transcription factor Y, beta 0.360133
ZNF197 zinc finger protein 197 0.356705
CPE carboxypeptidase E 0.355563
AIP aryl hydrocarbon receptor interacting protein 0.354802
SRI sorcin 0.352522
PGS1 phosphatidylglycerophosphate synthase 1 0.34645
GUSB glucuronidase, beta 0.344556
LRRC25 leucine rich repeat containing 25 0.344178
CYP4B1 cytochrome P450, family 4, subfamily B, polypeptide 1 0.343421
PGAP3 post-GPI attachment to proteins 3 0.341907
SKIV2L superkiller viralicidic activity 2-like (S. cerevisiae) 0.341151
NFYA nuclear transcription factor Y, alpha 0.326829
DYNLL1 dynein, light chain, LC8-type 1 0.324201
NETO2 neuropilin (NRP) and tolloid (TLL)-like 2 0.309986
UGP2 UDP-glucose pyrophosphorylase 2 0.307004
GLDC glycine dehydrogenase (decarboxylating) 0.305515
CSNK2A1 casein kinase 2, alpha 1 polypeptide 0.305515
NBPF10 neuroblastoma breakpoint family, member 10 0.302168
CA1 carbonic anhydrase I 0.299569
DRAP1 DR1-associated protein 1 (negative cofactor 2 alpha) 0.298455
DCLRE1C DNA cross-link repair 1C 0.291047
AKTIP AKT interacting protein 0.289938
PIF1 PIF1 5'-to-3' DNA helicase 0.282282
AP2S1 adaptor-related protein complex 2, sigma 1 subunit 0.279245
PDXP pyridoxal (pyridoxine, vitamin B6) phosphatase 0.277774
IPP intracisternal A particle-promoted polypeptide 0.271533
HAO1 hydroxyacid oxidase (glycolate oxidase) 1 0.267505
HAO2 hydroxyacid oxidase 2 (long chain) 0.266042
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.265311
AP1S1 adaptor-related protein complex 1, sigma 1 subunit 0.261296
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 0.259837
GZMM granzyme M (lymphocyte met-ase 1) 0.257652
PDSS1 prenyl (decaprenyl) diphosphate synthase, subunit 1 0.254743
FDPS farnesyl diphosphate synthase 0.251839
TAS1R1 taste receptor, type 1, member 1 0.247492
PNLIP pancreatic lipase 0.24424
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.243879
STOM stomatin 0.243879
PES1 pescadillo ribosomal biogenesis factor 1 0.241356
PDCL3 phosducin-like 3 0.240636
TRIM10 tripartite motif containing 10 0.230245
TKT transketolase 0.229176
FBLIM1 filamin binding LIM protein 1 0.228108
TRIM26 tripartite motif containing 26 0.225267
PPP1R8 protein phosphatase 1, regulatory subunit 8 0.224204
CRYZ crystallin, zeta (quinone reductase) 0.217511
SAR1B secretion associated, Ras related GTPase 1B 0.21716
RBBP9 retinoblastoma binding protein 9 0.21716
TRIM15 tripartite motif containing 15 0.215761
GGPS1 geranylgeranyl diphosphate synthase 1 0.215761
TSKU tsukushi, small leucine rich proteoglycan 0.208825
CPEB1 cytoplasmic polyadenylation element binding protein 1 0.200663
NME3 NME/NM23 nucleoside diphosphate kinase 3 0.200663
PPP1R14A protein phosphatase 1, regulatory (inhibitor) subunit 14A 0.197993
SH3TC2 SH3 domain and tetratricopeptide repeats 2 0.196669
CNTN3 contactin 3 (plasmacytoma associated) 0.19601
ACE2 angiotensin I converting enzyme 2 0.191135
CCDC62 coiled-coil domain containing 62 0.190175
NME4 NME/NM23 nucleoside diphosphate kinase 4 0.188905
PPA1 pyrophosphatase (inorganic) 1 0.183328
GLUL glutamate-ammonia ligase 0.179167
G6PD glucose-6-phosphate dehydrogenase 0.177439
BLVRB biliverdin reductase B 0.176024
SIX2 SIX homeobox 2 0.174635
C21ORF2 chromosome 21 open reading frame 2 0.173814
PGLS 6-phosphogluconolactonase 0.172735
FEN1 flap structure-specific endonuclease 1 0.171937
EGLN2 egl-9 family hypoxia-inducible factor 2 0.168101
GSR glutathione reductase 0.167856
ZNF77 zinc finger protein 77 0.166405
RPS18P12 ribosomal protein S18 pseudogene 12 0.165932
NCF4 neutrophil cytosolic factor 4, 40kDa 0.164315
SERPINA6 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6 0.162546
RPS18 ribosomal protein S18 0.161275
MTO1 mitochondrial tRNA translation optimization 1 0.158882
IL4I1 interleukin 4 induced 1 0.15776
VTA1 vesicle (multivesicular body) trafficking 1 0.15776
ZNF79 zinc finger protein 79 0.156342
SLC26A6 solute carrier family 26 (anion exchanger), member 6 0.14291
NADK NAD kinase 0.142013
CPLX1 complexin 1 0.141574
ADH1A alcohol dehydrogenase 1A (class I), alpha polypeptide 0.141519
ATPIF1 ATPase inhibitory factor 1 0.141433
LHB luteinizing hormone beta polypeptide 0.141331
CHL1 cell adhesion molecule L1-like 0.140828
SCX scleraxis basic helix-loop-helix transcription factor 0.140388
MSH2 mutS homolog 2 0.140059
ADAMTS2 ADAM metallopeptidase with thrombospondin type 1 motif, 2 0.13975
SLC27A1 solute carrier family 27 (fatty acid transporter), member 1 0.139544
GPR182 G protein-coupled receptor 182 0.139409
RPS2 ribosomal protein S2 0.139239
PYGB phosphorylase, glycogen; brain 0.136856
PYGL phosphorylase, glycogen, liver 0.136841
PYGM phosphorylase, glycogen, muscle 0.13676
ALB albumin 0.128409