sw-1353 cell Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description Human bone chondrosarcoma cell line. The SW 1353 cell line was initiated by A. Leibovitz at the Scott and White Clinic, Temple, Texas in 1977 from a primary grade II chondrosarcoma of the right humerus obtained from a 72 year old female Caucasian. (BRENDA Tissue and Enzyme Source Ontology, BTO_0002003)
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Genes

72 proteins co-occuring with the tissue sw-1353 cell in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
MMP13 matrix metallopeptidase 13 2.12725
MMP1 matrix metallopeptidase 1 1.61659
ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif, 4 1.3228
MMP3 matrix metallopeptidase 3 1.22291
SOX9 SRY (sex determining region Y)-box 9 1.16826
ADAMTS3 ADAM metallopeptidase with thrombospondin type 1 motif, 3 1.14609
COL2A1 collagen, type II, alpha 1 1.13811
ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 1.1142
PRRC2A proline-rich coiled-coil 2A 1.10756
SRPX sushi-repeat containing protein, X-linked 1.10004
IL1B interleukin 1, beta 1.0462
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.925051
MYBPH myosin binding protein H 0.900296
ACAN aggrecan 0.890525
BAX BCL2-associated X protein 0.8601
BCL3 B-cell CLL/lymphoma 3 0.809803
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.800626
RGCC regulator of cell cycle 0.766125
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.755364
FGFRL1 fibroblast growth factor receptor-like 1 0.724041
ADGRG1 adhesion G protein-coupled receptor G1 0.70886
CASP9 caspase 9, apoptosis-related cysteine peptidase 0.700671
JUN jun proto-oncogene 0.655836
XYLT1 xylosyltransferase I 0.620217
BCL2L1 BCL2-like 1 0.620217
PDCD5 programmed cell death 5 0.617796
ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 0.612958
HDAC9 histone deacetylase 9 0.592043
RUNX2 runt-related transcription factor 2 0.553683
IL10RA interleukin 10 receptor, alpha 0.551298
TNF tumor necrosis factor 0.531484
MAP3K7 mitogen-activated protein kinase kinase kinase 7 0.530693
MMP9 matrix metallopeptidase 9 0.518465
MAPK8 mitogen-activated protein kinase 8 0.478923
MMP2 matrix metallopeptidase 2 0.474646
HHAT hedgehog acyltransferase 0.474258
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.469599
CORIN corin, serine peptidase 0.466498
SPINT1 serine peptidase inhibitor, Kunitz type 1 0.463013
S100A1 S100 calcium binding protein A1 0.461465
CASP3 caspase 3, apoptosis-related cysteine peptidase 0.461078
TIMP3 TIMP metallopeptidase inhibitor 3 0.417718
COL10A1 collagen, type X, alpha 1 0.412391
MMP14 matrix metallopeptidase 14 (membrane-inserted) 0.393064
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.373493
CRLF1 cytokine receptor-like factor 1 0.363766
ENDOG endonuclease G 0.345558
GRIN2D glutamate receptor, ionotropic, N-methyl D-aspartate 2D 0.342602
EFNA5 ephrin-A5 0.330827
FAM195A family with sequence similarity 195, member A 0.304279
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.294581
APOD apolipoprotein D 0.287092
TIMP1 TIMP metallopeptidase inhibitor 1 0.266069
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 0.263669
CASP8 caspase 8, apoptosis-related cysteine peptidase 0.259254
PARP1 poly (ADP-ribose) polymerase 1 0.256234
FGF9 fibroblast growth factor 9 0.256234
MAP2K3 mitogen-activated protein kinase kinase 3 0.253578
ERN1 endoplasmic reticulum to nucleus signaling 1 0.252919
SRY sex determining region Y 0.242983
HDAC3 histone deacetylase 3 0.242672
CEBPB CCAAT/enhancer binding protein (C/EBP), beta 0.23961
RXRA retinoid X receptor, alpha 0.238706
CASP6 caspase 6, apoptosis-related cysteine peptidase 0.235457
CYR61 cysteine-rich, angiogenic inducer, 61 0.228234
PTHLH parathyroid hormone-like hormone 0.224398
IL1A interleukin 1, alpha 0.223662
ADIPOR2 adiponectin receptor 2 0.222699
B3GAT2 beta-1,3-glucuronyltransferase 2 0.216933
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b 0.216528
SMAD2 SMAD family member 2 0.213112
TIMP2 TIMP metallopeptidase inhibitor 2 0.212936