striated muscle thin filament Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description Filaments formed of actin and associated proteins; attached to Z discs at either end of sarcomeres in myofibrils. (Gene Ontology, GO_0005865)
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Genes

79 proteins co-occuring with the striated muscle thin filament cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
TNNT2 troponin T type 2 (cardiac) 3.67284
TNNI3 troponin I type 3 (cardiac) 3.3997
TPM1 tropomyosin 1 (alpha) 2.28846
MB myoglobin 1.82592
FABP3 fatty acid binding protein 3, muscle and heart 1.56959
NPPB natriuretic peptide B 1.43331
CTNS cystinosin, lysosomal cystine transporter 1.24865
CRP C-reactive protein, pentraxin-related 1.15928
TNNT3 troponin T type 3 (skeletal, fast) 0.95305
PYGB phosphorylase, glycogen; brain 0.928892
PYGL phosphorylase, glycogen, liver 0.928422
PYGM phosphorylase, glycogen, muscle 0.926074
LCN2 lipocalin 2 0.855257
ITGA2B integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41) 0.822206
IKZF3 IKAROS family zinc finger 3 (Aiolos) 0.770907
PAPPA pregnancy-associated plasma protein A, pappalysin 1 0.769539
DNAH8 dynein, axonemal, heavy chain 8 0.760887
TCF15 transcription factor 15 (basic helix-loop-helix) 0.706598
GOT2 glutamic-oxaloacetic transaminase 2, mitochondrial 0.700863
GDF15 growth differentiation factor 15 0.669425
CST3 cystatin C 0.669425
TPM2 tropomyosin 2 (beta) 0.650439
TNNI2 troponin I type 2 (skeletal, fast) 0.624355
TNNC1 troponin C type 1 (slow) 0.613742
CALM3 calmodulin 3 (phosphorylase kinase, delta) 0.60444
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.60444
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.604017
LGALS3 lectin, galactoside-binding, soluble, 3 0.595173
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.590553
ADM adrenomedullin 0.562602
ALB albumin 0.545236
C1QTNF3 C1q and tumor necrosis factor related protein 3 0.530028
RCAN3 RCAN family member 3 0.508383
DHX40 DEAH (Asp-Glu-Ala-His) box polypeptide 40 0.493775
ENHO energy homeostasis associated 0.478843
TNNI1 troponin I type 1 (skeletal, slow) 0.470005
MYOM2 myomesin 2 0.465198
MYL3 myosin, light chain 3, alkali; ventricular, skeletal, slow 0.450438
C16ORF82 chromosome 16 open reading frame 82 0.441708
PKNOX1 PBX/knotted 1 homeobox 1 0.431041
LCN8 lipocalin 8 0.429859
CD40LG CD40 ligand 0.41143
NEBL nebulette 0.388137
MYOM3 myomesin 3 0.376202
TNN tenascin N 0.374283
MGAM maltase-glucoamylase 0.348346
GOT1 glutamic-oxaloacetic transaminase 1, soluble 0.314839
INTU inturned planar cell polarity protein 0.311478
LGALS2 lectin, galactoside-binding, soluble, 2 0.305515
IL18 interleukin 18 0.294378
CSRP2 cysteine and glycine-rich protein 2 0.278509
GATA4 GATA binding protein 4 0.277406
QRSL1 glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 0.266774
SDSL serine dehydratase-like 0.264946
FRG1 FSHD region gene 1 0.262025
RCAN2 regulator of calcineurin 2 0.259109
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.258381
PVALB parvalbumin 0.257289
MYL2 myosin, light chain 2, regulatory, cardiac, slow 0.256561
CAPZB capping protein (actin filament) muscle Z-line, beta 0.250026
CA3 carbonic anhydrase III 0.246046
AMH anti-Mullerian hormone 0.235966
IL1RL1 interleukin 1 receptor-like 1 0.233817
MPO myeloperoxidase 0.220321
CALD1 caldesmon 1 0.215761
HAVCR1 hepatitis A virus cellular receptor 1 0.208481
PDCD1 programmed cell death 1 0.196999
APOBEC2 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2 0.195025
GSN gelsolin 0.194045
CHEK2 checkpoint kinase 2 0.192423
PCM1 pericentriolar material 1 0.187333
NEB nebulin 0.181524
CCR1 chemokine (C-C motif) receptor 1 0.177724
NPPA natriuretic peptide A 0.171149
PLAG1 pleiomorphic adenoma gene 1 0.171149
ACVR2B activin A receptor, type IIB 0.170888
BET1 Bet1 golgi vesicular membrane trafficking protein 0.16233
LXN latexin 0.161693
TRIM32 tripartite motif containing 32 0.158502