stratum lucidum Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description A thin somewhat translucent layer of cells lying superficial to the stratum granulosum and under the stratum corneum especially in thickened parts of the epidermis. (BRENDA Tissue and Enzyme Source Ontology, BTO_0000364)
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Genes

107 proteins co-occuring with the tissue stratum lucidum in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
CA13 carbonic anhydrase XIII 1.32371
CA4 carbonic anhydrase IV 1.28726
CALB2 calbindin 2 1.28592
SYP synaptophysin 1.26263
SLC17A7 solute carrier family 17 (vesicular glutamate transporter), member 7 1.24163
SV2A synaptic vesicle glycoprotein 2A 1.22781
GRM2 glutamate receptor, metabotropic 2 1.22781
CALB1 calbindin 1, 28kDa 1.19756
SYN1 synapsin I 1.16826
PLXNA2 plexin A2 1.15141
PLXNA4 plexin A4 1.09739
SLC30A3 solute carrier family 30 (zinc transporter), member 3 1.0603
PVALB parvalbumin 1.05677
SEMA6A sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 1.04049
NETO1 neuropilin (NRP) and tolloid (TLL)-like 1 1.01418
KCNA4 potassium channel, voltage gated shaker related subfamily A, member 4 0.944366
NETO2 neuropilin (NRP) and tolloid (TLL)-like 2 0.940066
SEMA6B sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B 0.916069
SNAP25 synaptosomal-associated protein, 25kDa 0.904553
AHSA1 AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast) 0.892223
PIP4K2A phosphatidylinositol-5-phosphate 4-kinase, type II, alpha 0.853788
GJD2 gap junction protein, delta 2, 36kDa 0.848325
CAMK2G calcium/calmodulin-dependent protein kinase II gamma 0.822757
KARS lysyl-tRNA synthetase 0.792709
SST somatostatin 0.792709
SDF4 stromal cell derived factor 4 0.792293
SYNPR synaptoporin 0.769855
PDYN prodynorphin 0.750818
BDNF brain-derived neurotrophic factor 0.731031
GAD2 glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa) 0.730208
SLC32A1 solute carrier family 32 (GABA vesicular transporter), member 1 0.718292
PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 0.706812
GNB5 guanine nucleotide binding protein (G protein), beta 5 0.704355
CORT cortistatin 0.701899
GRIA1 glutamate receptor, ionotropic, AMPA 1 0.659491
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B 0.654618
GRIK1 glutamate receptor, ionotropic, kainate 1 0.641238
DUOXA1 dual oxidase maturation factor 1 0.627081
PVRL1 poliovirus receptor-related 1 (herpesvirus entry mediator C) 0.620621
MAP1B microtubule-associated protein 1B 0.599675
ACTN1 actinin, alpha 1 0.586427
GRM1 glutamate receptor, metabotropic 1 0.586026
KCNC4 potassium channel, voltage gated Shaw related subfamily C, member 4 0.582019
GRM5 glutamate receptor, metabotropic 5 0.571219
ARL6IP5 ADP-ribosylation factor-like 6 interacting protein 5 0.568424
CNTN6 contactin 6 0.562042
NSF N-ethylmaleimide-sensitive factor 0.539396
SLC8A2 solute carrier family 8 (sodium/calcium exchanger), member 2 0.531089
CA3 carbonic anhydrase III 0.51453
NPY neuropeptide Y 0.510206
PRDX3 peroxiredoxin 3 0.509027
RPL13A ribosomal protein L13a 0.494136
KRT9 keratin 9, type I 0.493745
SCN10A sodium channel, voltage gated, type X alpha subunit 0.483206
CCK cholecystokinin 0.482428
ATP6V0A1 ATPase, H+ transporting, lysosomal V0 subunit a1 0.466885
PPP1R9B protein phosphatase 1, regulatory subunit 9B 0.466498
HRH4 histamine receptor H4 0.458373
MLLT4 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 0.4576
GRIK4 glutamate receptor, ionotropic, kainate 4 0.45567
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 0.451813
CGB7 chorionic gonadotropin, beta polypeptide 7 0.445653
STXBP1 syntaxin binding protein 1 0.444499
MARCH7 membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 0.442962
CGB5 chorionic gonadotropin, beta polypeptide 5 0.44181
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.44181
EHMT1 euchromatic histone-lysine N-methyltransferase 1 0.441042
DBN1 drebrin 1 0.426109
CGB chorionic gonadotropin, beta polypeptide 0.425726
CGB8 chorionic gonadotropin, beta polypeptide 8 0.424581
PSAP prosaposin 0.412011
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.408212
KCNAB2 potassium channel, voltage gated subfamily A regulatory beta subunit 2 0.40328
UGP2 UDP-glucose pyrophosphorylase 2 0.395709
WNT7A wingless-type MMTV integration site family, member 7A 0.383637
CA12 carbonic anhydrase XII 0.377621
GRM7 glutamate receptor, metabotropic 7 0.376494
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A 0.372743
NCAN neurocan 0.369373
AIF1 allograft inflammatory factor 1 0.364513
GRIN2D glutamate receptor, ionotropic, N-methyl D-aspartate 2D 0.360782
CD226 CD226 molecule 0.352227
BSN bassoon presynaptic cytomatrix protein 0.350001
RAB3A RAB3A, member RAS oncogene family 0.333396
ADRA2A adrenoceptor alpha 2A 0.320227
ARF6 ADP-ribosylation factor 6 0.310059
CHGB chromogranin B 0.303559
SYNPO synaptopodin 0.29996
C1R complement component 1, r subcomponent 0.299242
DCX doublecortin 0.298165
TACR1 tachykinin receptor 1 0.294223
ADRA1B adrenoceptor alpha 1B 0.285671
ACHE acetylcholinesterase (Yt blood group) 0.282837
NTF3 neurotrophin 3 0.282483
ADRA1A adrenoceptor alpha 1A 0.273346
C1S complement component 1, s subcomponent 0.271952
KCNA2 potassium channel, voltage gated shaker related subfamily A, member 2 0.265725
NGF nerve growth factor (beta polypeptide) 0.258917
KCNA1 potassium channel, voltage gated shaker related subfamily A, member 1 0.257572
EPHB3 EPH receptor B3 0.244545
RYR2 ryanodine receptor 2 (cardiac) 0.240826
CACNA1D calcium channel, voltage-dependent, L type, alpha 1D subunit 0.240826
RBFOX3 RNA binding protein, fox-1 homolog (C. elegans) 3 0.23781
EPHA4 EPH receptor A4 0.23459
SFRP1 secreted frizzled-related protein 1 0.234302
GRIA2 glutamate receptor, ionotropic, AMPA 2 0.232039
IARS isoleucyl-tRNA synthetase 0.227707