splenic marginal zone lymphoma Gene Set

Dataset DISEASES Text-mining Gene-Disease Assocation Evidence Scores
Category disease or phenotype associations
Type disease
Description A marginal zone B-cell lymphocyte located_in the spleen comprised of B-cells in place of white pulp. (Human Disease Ontology, DOID_0050750)
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Genes

108 genes co-occuring with the disease splenic marginal zone lymphoma in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

Symbol Name Standardized Value
IGH immunoglobulin heavy locus 1.69451
CD5 CD5 molecule 1.41446
TMEM209 transmembrane protein 209 1.3241
IGHV5-51 immunoglobulin heavy variable 5-51 1.30925
IGHV3-64 immunoglobulin heavy variable 3-64 1.25341
IGHV4-34 immunoglobulin heavy variable 4-34 1.24254
MAP3K14 mitogen-activated protein kinase kinase kinase 14 1.2369
ITGAE integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide) 1.23212
IGKV3-15 immunoglobulin kappa variable 3-15 1.20007
CD19 CD19 molecule 1.18927
CCND1 cyclin D1 1.17421
COPG2 coatomer protein complex, subunit gamma 2 1.17078
PLA2G4D phospholipase A2, group IVD (cytosolic) 1.1635
CARD11 caspase recruitment domain family, member 11 1.15794
IGHV3-74 immunoglobulin heavy variable 3-74 1.15198
CD79B CD79b molecule, immunoglobulin-associated beta 1.149
IGHV3-7 immunoglobulin heavy variable 3-7 1.09671
AMOTL1 angiomotin like 1 1.08579
NOTCH2 notch 2 1.069
SPEN spen family transcriptional repressor 1.0585
GNG11 guanine nucleotide binding protein (G protein), gamma 11 1.0383
BCL6 B-cell CLL/lymphoma 6 1.03072
OCIAD1 OCIA domain containing 1 1.01723
RBM15 RNA binding motif protein 15 1.01132
CD22 CD22 molecule 0.982636
IGKV1-39 immunoglobulin kappa variable 1-39 (gene/pseudogene) 0.980531
IGHV1-2 immunoglobulin heavy variable 1-2 0.97212
TCL1A T-cell leukemia/lymphoma 1A 0.958287
NOTCH2NL notch 2 N-terminal like 0.93497
ZC3HC1 zinc finger, C3HC-type containing 1 0.879014
PCDH9 protocadherin 9 0.872462
MYD88 myeloid differentiation primary response 88 0.866321
SOX11 SRY (sex determining region Y)-box 11 0.838066
CELSR1 cadherin, EGF LAG seven-pass G-type receptor 1 0.829049
LPXN leupaxin 0.812642
MALT1 MALT1 paracaspase 0.803616
BIRC3 baculoviral IAP repeat containing 3 0.802385
TP53 tumor protein p53 0.799103
FBXO11 F-box protein 11 0.777386
CLLU1 chronic lymphocytic leukemia up-regulated 1 0.774523
DTX1 deltex 1, E3 ubiquitin ligase 0.771661
FAT4 FAT atypical cadherin 4 0.761862
SND1 staphylococcal nuclease and tudor domain containing 1 0.743141
IGHV1-69 immunoglobulin heavy variable 1-69 0.72612
IGKV1D-42 immunoglobulin kappa variable 1D-42 (non-functional) 0.720058
IGHV4-39 immunoglobulin heavy variable 4-39 0.6939
CD27 CD27 molecule 0.687491
TFDP1 transcription factor Dp-1 0.687091
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6 0.66914
CALU calumenin 0.658422
TRRAP transformation/transcription domain-associated protein 0.65565
MNDA myeloid cell nuclear differentiation antigen 0.649323
IGHV3-9 immunoglobulin heavy variable 3-9 0.646559
SERPINA9 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9 0.646165
PAX5 paired box 5 0.641433
TRAF3 TNF receptor-associated factor 3 0.635135
TRAF5 TNF receptor-associated factor 5 0.62728
MIR26B microRNA 26b 0.619051
BCR breakpoint cluster region 0.604201
IGKV3-20 immunoglobulin kappa variable 3-20 0.594843
IRF5 interferon regulatory factor 5 0.593674
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.585108
NFKB2 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) 0.561004
CD81 CD81 molecule 0.551686
MIR27B microRNA 27b 0.53928
PAX2 paired box 2 0.528063
CDK6 cyclin-dependent kinase 6 0.522659
CBFA2T3 core-binding factor, runt domain, alpha subunit 2; translocated to, 3 0.518034
PRKCA protein kinase C, alpha 0.500761
CLPTM1L CLPTM1-like 0.471468
CD72 CD72 molecule 0.471089
SEMG1 semenogelin I 0.469954
ANXA1 annexin A1 0.46655
CD38 CD38 molecule 0.465416
TNIP1 TNFAIP3 interacting protein 1 0.441666
MIR100 microRNA 100 0.438658
KMT2B lysine (K)-specific methyltransferase 2B 0.438282
SETX senataxin 0.428516
RAD51C RAD51 paralog C 0.427015
HYLS1 hydrolethalus syndrome 1 0.416896
MIB1 mindbomb E3 ubiquitin protein ligase 1 0.398216
CUL1 cullin 1 0.391885
BCL2 B-cell CLL/lymphoma 2 0.336144
MIR21 microRNA 21 0.335778
CD200 CD200 molecule 0.335412
CDK7 cyclin-dependent kinase 7 0.330295
FOXP1 forkhead box P1 0.327375
CAV2 caveolin 2 0.326646
CXCR3 chemokine (C-X-C motif) receptor 3 0.305587
CXCL9 chemokine (C-X-C motif) ligand 9 0.301254
MIR223 microRNA 223 0.294053
CD40 CD40 molecule, TNF receptor superfamily member 5 0.290103
EP300 E1A binding protein p300 0.289744
BCL3 B-cell CLL/lymphoma 3 0.287593
USH2A Usher syndrome 2A (autosomal recessive, mild) 0.269753
SLC35B2 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2 0.266913
JUND jun D proto-oncogene 0.255241
NOTCH1 notch 1 0.236312
SELPLG selectin P ligand 0.223165
ICAM3 intercellular adhesion molecule 3 0.221108
MIR145 microRNA 145 0.201962
CXCR5 chemokine (C-X-C motif) receptor 5 0.199033
MIR146A microRNA 146a 0.191719
AICDA activation-induced cytidine deaminase 0.190476
C1S complement component 1, s subcomponent 0.175146
SERPING1 serpin peptidase inhibitor, clade G (C1 inhibitor), member 1 0.16933
FBL fibrillarin 0.167452
CREBBP CREB binding protein 0.163111