spinal root Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description The anterior and posterior roots of the spinal nerves. (BRENDA Tissue and Enzyme Source Ontology, BTO_0000883)
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Genes

186 proteins co-occuring with the tissue spinal root in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
COL6A1 collagen, type VI, alpha 1 1.694
HSF4 heat shock transcription factor 4 1.59275
NF1 neurofibromin 1 1.41999
HTRA1 HtrA serine peptidase 1 1.31739
CST7 cystatin F (leukocystatin) 1.26665
CRLF1 cytokine receptor-like factor 1 1.25413
TAC1 tachykinin, precursor 1 1.18468
PMP22 peripheral myelin protein 22 1.17802
CALCA calcitonin-related polypeptide alpha 1.16515
MBP myelin basic protein 1.11774
SNX15 sorting nexin 15 1.06868
NF2 neurofibromin 2 (merlin) 1.06382
GDNF glial cell derived neurotrophic factor 1.05809
MPZ myelin protein zero 1.03566
BCS1L BC1 (ubiquinol-cytochrome c reductase) synthesis-like 1.01418
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3 0.976315
CHAT choline O-acetyltransferase 0.974149
BDNF brain-derived neurotrophic factor 0.94867
AVPR2 arginine vasopressin receptor 2 0.945656
MAG myelin associated glycoprotein 0.945656
KLK8 kallikrein-related peptidase 8 0.943075
EDA ectodysplasin A 0.92291
ASMTL acetylserotonin O-methyltransferase-like 0.916923
NOTCH1 notch 1 0.902424
TNF tumor necrosis factor 0.898595
DCD dermcidin 0.878666
PARP16 poly (ADP-ribose) polymerase family, member 16 0.842027
BIN1 bridging integrator 1 0.820248
PPM1F protein phosphatase, Mg2+/Mn2+ dependent, 1F 0.800208
GFAP glial fibrillary acidic protein 0.797291
SNN stannin 0.783141
ATF3 activating transcription factor 3 0.781894
SYP synaptophysin 0.742152
PSMD13 proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 0.740503
PPARGC1B peroxisome proliferator-activated receptor gamma, coactivator 1 beta 0.739678
ASIC3 acid sensing (proton gated) ion channel 3 0.719524
ENO2 enolase 2 (gamma, neuronal) 0.707631
TES testin LIM domain protein 0.697399
CYHR1 cysteine/histidine-rich 1 0.696581
CNTF ciliary neurotrophic factor 0.692902
NTF3 neurotrophin 3 0.679433
C1D C1D nuclear receptor corepressor 0.67495
CCS copper chaperone for superoxide dismutase 0.673728
NEFH neurofilament, heavy polypeptide 0.670471
PMP2 peripheral myelin protein 2 0.661523
ACHE acetylcholinesterase (Yt blood group) 0.659897
ESPN espin 0.65746
NGF nerve growth factor (beta polypeptide) 0.65543
TBX1 T-box 1 0.644074
CRNN cornulin 0.642048
KPNA3 karyopherin alpha 3 (importin alpha 4) 0.638404
PGRMC1 progesterone receptor membrane component 1 0.634762
FTH1 ferritin, heavy polypeptide 1 0.63274
CD6 CD6 molecule 0.631931
IVD isovaleryl-CoA dehydrogenase 0.628293
IL1B interleukin 1, beta 0.621428
LSR lipolysis stimulated lipoprotein receptor 0.615377
NPS neuropeptide S 0.612555
CD99 CD99 molecule 0.607319
ALB albumin 0.604502
SETD2 SET domain containing 2 0.602892
RICTOR RPTOR independent companion of MTOR, complex 2 0.58242
ALDH4A1 aldehyde dehydrogenase 4 family, member A1 0.580818
NRG1 neuregulin 1 0.576816
GLDN gliomedin 0.573217
PLA2G1B phospholipase A2, group IB (pancreas) 0.566828
NPFF neuropeptide FF-amide peptide precursor 0.565631
PASK PAS domain containing serine/threonine kinase 0.563637
GDF2 growth differentiation factor 2 0.56284
ACCS 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional) 0.552888
NEFM neurofilament, medium polypeptide 0.550106
ARL2 ADP-ribosylation factor-like 2 0.546533
BIN3 bridging integrator 3 0.536229
TRPV1 transient receptor potential cation channel, subfamily V, member 1 0.53267
SETD1A SET domain containing 1A 0.529113
LSS lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) 0.529113
FOS FBJ murine osteosarcoma viral oncogene homolog 0.524377
CANX calnexin 0.5228
KPNA1 karyopherin alpha 1 (importin alpha 5) 0.520435
OMG oligodendrocyte myelin glycoprotein 0.519253
RAB3C RAB3C, member RAS oncogene family 0.518465
EWSR1 EWS RNA-binding protein 1 0.512957
IGHMBP2 immunoglobulin mu binding protein 2 0.505887
GAP43 growth associated protein 43 0.50275
GDAP1 ganglioside induced differentiation associated protein 1 0.501182
KIF5A kinesin family member 5A 0.497266
MTMR2 myotubularin related protein 2 0.487886
GRM6 glutamate receptor, metabotropic 6 0.487886
AGAP3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 0.482038
NCAN neurocan 0.47348
IVL involucrin 0.468436
STK39 serine threonine kinase 39 0.466498
PLXNA2 plexin A2 0.466111
CAPNS1 calpain, small subunit 1 0.464948
CDH7 cadherin 7, type 2 0.464561
PTN pleiotrophin 0.464174
TNC tenascin C 0.456828
PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 0.451428
IL6 interleukin 6 0.449116
SLC22A9 solute carrier family 22 (organic anion transporter), member 9 0.442962
SCN10A sodium channel, voltage gated, type X alpha subunit 0.441042
SLC22A11 solute carrier family 22 (organic anion/urate transporter), member 11 0.43414
WDFY2 WD repeat and FYVE domain containing 2 0.432225
CDH19 cadherin 19, type 2 0.430695
LAMA4 laminin, alpha 4 0.430312
CD2BP2 CD2 (cytoplasmic tail) binding protein 2 0.426109
NGFR nerve growth factor receptor 0.424963
PLXNA4 plexin A4 0.419242
ATL1 atlastin GTPase 1 0.410111
REXO2 RNA exonuclease 2 0.399114
MARCH7 membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 0.395709
LAMA2 laminin, alpha 2 0.394576
SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 0.391931
CD68 CD68 molecule 0.391176
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.388912
MBTPS2 membrane-bound transcription factor peptidase, site 2 0.388535
RBFOX3 RNA binding protein, fox-1 homolog (C. elegans) 3 0.381755
MAPK14 mitogen-activated protein kinase 14 0.381755
RPH3A rabphilin 3A 0.37687
SEMA6A sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 0.370496
LBX1 ladybird homeobox 1 0.365633
AIF1 allograft inflammatory factor 1 0.364513
HOXD10 homeobox D10 0.364139
BMP2 bone morphogenetic protein 2 0.363393
FXYD3 FXYD domain containing ion transport regulator 3 0.361527
LAMA5 laminin, alpha 5 0.35557
CRYBB2 crystallin, beta B2 0.35334
ARHGEF1 Rho guanine nucleotide exchange factor (GEF) 1 0.351114
SMN2 survival of motor neuron 2, centromeric 0.348148
SLC1A2 solute carrier family 1 (glial high affinity glutamate transporter), member 2 0.345558
CRP C-reactive protein, pentraxin-related 0.341495
NDUFB8 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa 0.335233
TCHH trichohyalin 0.329361
FCN3 ficolin (collagen/fibrinogen domain containing) 3 0.327896
ADGRL4 adhesion G protein-coupled receptor L4 0.326432
KCNA1 potassium channel, voltage gated shaker related subfamily A, member 1 0.322779
TTR transthyretin 0.32132
CCL23 chemokine (C-C motif) ligand 23 0.317315
SST somatostatin 0.314046
EPS8 epidermal growth factor receptor pathway substrate 8 0.312957
BCHE butyrylcholinesterase 0.310421
TRPV4 transient receptor potential cation channel, subfamily V, member 4 0.310421
TAC3 tachykinin 3 0.303198
EXT2 exostosin glycosyltransferase 2 0.300679
CAPN1 calpain 1, (mu/I) large subunit 0.299601
ZC3H12D zinc finger CCCH-type containing 12D 0.29673
CHGA chromogranin A 0.296013
FN1 fibronectin 1 0.294581
MOG myelin oligodendrocyte glycoprotein 0.292436
ATXN7 ataxin 7 0.287447
TCEA1 transcription elongation factor A (SII), 1 0.287447
LARS leucyl-tRNA synthetase 0.284962
DPYSL5 dihydropyrimidinase-like 5 0.282837
TAP1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) 0.282837
TPBG trophoblast glycoprotein 0.281776
TRPV3 transient receptor potential cation channel, subfamily V, member 3 0.275794
KCNA6 potassium channel, voltage gated shaker related subfamily A, member 6 0.274394
TNXA tenascin XA (pseudogene) 0.270909
TNXB tenascin XB 0.270561
PLXNA1 plexin A1 0.269174
BMP7 bone morphogenetic protein 7 0.268828
KIF3A kinesin family member 3A 0.268137
TH tyrosine hydroxylase 0.255234
MAVS mitochondrial antiviral signaling protein 0.25259
NPSR1 neuropeptide S receptor 1 0.251606
LGI1 leucine-rich, glioma inactivated 1 0.251606
CA1 carbonic anhydrase I 0.249329
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.247079
B3GAT1 beta-1,3-glucuronyltransferase 1 0.246124
NFASC neurofascin 0.243918
GDF6 growth differentiation factor 6 0.240826
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 0.23604
CELSR3 cadherin, EGF LAG seven-pass G-type receptor 3 0.235167
SLC18A3 solute carrier family 18 (vesicular acetylcholine transporter), member 3 0.231482
MLANA melan-A 0.230931
CYS1 cystin 1 0.230931
IL1A interleukin 1, alpha 0.226155
ITIH4 inter-alpha-trypsin inhibitor heavy chain family, member 4 0.223419
OTP orthopedia homeobox 0.21883
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.217554
FLI1 Fli-1 proto-oncogene, ETS transcription factor 0.217346
EMX1 empty spiracles homeobox 1 0.214388
MRI1 methylthioribose-1-phosphate isomerase 1 0.212761
MAPT microtubule-associated protein tau 0.199633
TRH thyrotropin-releasing hormone 0.196198
CD34 CD34 molecule 0.189078