smooth endoplasmic reticulum part Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description Any constituent part of the smooth endoplasmic reticulum (also called smooth ER, or SER). (Gene Ontology, GO_0097425)
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Genes

106 proteins co-occuring with the smooth endoplasmic reticulum part cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
IGF1 insulin-like growth factor 1 (somatomedin C) 3.00765
GHRH growth hormone releasing hormone 1.59546
INS insulin 1.48758
SMC5 structural maintenance of chromosomes 5 1.06802
PRL prolactin 0.972263
SMCP sperm mitochondria-associated cysteine-rich protein 0.931245
IGF2 insulin-like growth factor 2 0.915776
CDRT1 CMT1A duplicated region transcript 1 0.881477
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) 0.858933
CSH1 chorionic somatomammotropin hormone 1 (placental lactogen) 0.856635
CSH2 chorionic somatomammotropin hormone 2 0.834597
TRH thyrotropin-releasing hormone 0.829548
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 0.79148
SMC6 structural maintenance of chromosomes 6 0.768627
PPFIA2 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 0.75453
SMC2 structural maintenance of chromosomes 2 0.707482
LPPR4 lipid phosphate phosphatase-related protein type 4 0.679849
FGF1 fibroblast growth factor 1 (acidic) 0.663368
FBXW10 F-box and WD repeat domain containing 10 0.610778
HSD3B1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 0.601909
SST somatostatin 0.583012
PTGR1 prostaglandin reductase 1 0.561772
GNRH1 gonadotropin-releasing hormone 1 (luteinizing-releasing hormone) 0.547297
SMC3 structural maintenance of chromosomes 3 0.543587
CYP21A2 cytochrome P450, family 21, subfamily A, polypeptide 2 0.466399
JPH3 junctophilin 3 0.439728
YRDC yrdC N(6)-threonylcarbamoyltransferase domain containing 0.429859
SERPINB8 serpin peptidase inhibitor, clade B (ovalbumin), member 8 0.383509
RRAS related RAS viral (r-ras) oncogene homolog 0.382354
TRPC6 transient receptor potential cation channel, subfamily C, member 6 0.380429
INSR insulin receptor 0.332848
TRIM10 tripartite motif containing 10 0.320077
RRAS2 related RAS viral (r-ras) oncogene homolog 2 0.315212
TRIM26 tripartite motif containing 26 0.314839
CYP11B2 cytochrome P450, family 11, subfamily B, polypeptide 2 0.310732
TRIM15 tripartite motif containing 15 0.305143
GCG glucagon 0.280716
STX17 syntaxin 17 0.276671
MARCH7 membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 0.2719
PURB purine-rich element binding protein B 0.254743
CARS cysteinyl-tRNA synthetase 0.245323
NBPF8 neuroblastoma breakpoint family, member 8 0.240276
ARTN artemin 0.209858
GH1 growth hormone 1 0.200663
IGFBP1 insulin-like growth factor binding protein 1 0.196339
UBE2G1 ubiquitin-conjugating enzyme E2G 1 0.194371
NCK1 NCK adaptor protein 1 0.192746
FCER1A Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide 0.192423
LIN7A lin-7 homolog A (C. elegans) 0.192423
FCER1G Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide 0.188905
TTR transthyretin 0.183328
GH2 growth hormone 2 0.179167
SNRNP40 small nuclear ribonucleoprotein 40kDa (U5) 0.165932
SEC23B Sec23 homolog B (S. cerevisiae) 0.165932
CAMK4 calcium/calmodulin-dependent protein kinase IV 0.162117
TPP2 tripeptidyl peptidase II 0.159658
RYR1 ryanodine receptor 1 (skeletal) 0.147674
TMBIM4 transmembrane BAX inhibitor motif containing 4 0.142565
ADRA2A adrenoceptor alpha 2A 0.142392
MTTP microsomal triglyceride transfer protein 0.14064
CSN3 casein kappa 0.13876
GJB1 gap junction protein, beta 1, 32kDa 0.138278
SDF4 stromal cell derived factor 4 0.136491
GJB2 gap junction protein, beta 2, 26kDa 0.13614
CALM3 calmodulin 3 (phosphorylase kinase, delta) 0.136129
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.136124
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.136119
RYR2 ryanodine receptor 2 (cardiac) 0.135364
G6PC glucose-6-phosphatase, catalytic subunit 0.135192
DNAH8 dynein, axonemal, heavy chain 8 0.134002
TH tyrosine hydroxylase 0.133963
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.133205
ALDH3A2 aldehyde dehydrogenase 3 family, member A2 0.130439
UBE2G2 ubiquitin-conjugating enzyme E2G 2 0.130107
APOB apolipoprotein B 0.129737
CALB2 calbindin 2 0.128538
ACHE acetylcholinesterase (Yt blood group) 0.128431
CALB1 calbindin 1, 28kDa 0.128322
DPAGT1 dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) 0.127967
EPHX1 epoxide hydrolase 1, microsomal (xenobiotic) 0.127555
PYGB phosphorylase, glycogen; brain 0.125511
PYGL phosphorylase, glycogen, liver 0.125498
PYGM phosphorylase, glycogen, muscle 0.125414
HM13 histocompatibility (minor) 13 0.125345
SEC13 SEC13 homolog (S. cerevisiae) 0.124532
GSS glutathione synthetase 0.124136
TRDN triadin 0.123759
HBD hemoglobin, delta 0.123054
JAG2 jagged 2 0.122918
MX1 MX dynamin-like GTPase 1 0.122643
CALR calreticulin 0.121855
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) 0.121115
PGRMC1 progesterone receptor membrane component 1 0.120999
SREBF2 sterol regulatory element binding transcription factor 2 0.1206
AQP1 aquaporin 1 (Colton blood group) 0.118887
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.118704
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 0.118285
HBB hemoglobin, beta 0.117087
CANX calnexin 0.115354
CA4 carbonic anhydrase IV 0.11405
ANPEP alanyl (membrane) aminopeptidase 0.113809
EEF2 eukaryotic translation elongation factor 2 0.111364
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.10889
NCL nucleolin 0.10665
PPFIA3 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 0.106153
MUL1 mitochondrial E3 ubiquitin protein ligase 1 0.10607