small-subunit processome Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins. (Gene Ontology, GO_0032040)
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36 proteins co-occuring with the small-subunit processome cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
UTP18 UTP18 small subunit (SSU) processome component homolog (yeast) 2.08745
UTP6 UTP6, small subunit (SSU) processome component, homolog (yeast) 2.05321
UTP23 UTP23, small subunit (SSU) processome component, homolog (yeast) 2.01124
UTP20 UTP20, small subunit (SSU) processome component, homolog (yeast) 1.92368
WDR43 WD repeat domain 43 1.80841
UTP15 UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae) 1.76367
CIRH1A cirrhosis, autosomal recessive 1A (cirhin) 1.54009
PWP2 PWP2 periodic tryptophan protein homolog (yeast) 1.51299
NOL10 nucleolar protein 10 1.49831
DCAF13 DDB1 and CUL4 associated factor 13 1.48249
UTP14A UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast) 1.46948
EMG1 EMG1 N1-specific pseudouridine methyltransferase 1.28836
PWP1 PWP1 homolog (S. cerevisiae) 1.2777
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) 1.23975
TBL3 transducin (beta)-like 3 1.23505
WDR46 WD repeat domain 46 1.20189
RCL1 RNA terminal phosphate cyclase-like 1 1.10307
NHP2 NHP2 ribonucleoprotein 1.06094
BMS1 BMS1 ribosome biogenesis factor 1.02829
PDCD11 programmed cell death 11 0.917644
RUVBL1 RuvB-like AAA ATPase 1 0.894868
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) 0.866287
RPS9 ribosomal protein S9 0.810735
FTSJ2 FtsJ RNA methyltransferase homolog 2 (E. coli) 0.750904
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 0.599381
RPS14 ribosomal protein S14 0.514493
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.473617
PRC1 protein regulator of cytokinesis 1 0.373516
XRN2 5'-3' exoribonuclease 2 0.365095
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.275202
RPS6 ribosomal protein S6 0.232744
NCL nucleolin 0.224558
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.224204
TP53 tumor protein p53 0.180634
FBLL1 fibrillarin-like 1 0.173814
G6PD glucose-6-phosphate dehydrogenase 0.165463