small ribosomal subunit Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The smaller of the two subunits of a ribosome. (Gene Ontology, GO_0015935)
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Genes

237 proteins co-occuring with the small ribosomal subunit cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 1.84361
EIF4E eukaryotic translation initiation factor 4E 1.77796
EIF4B eukaryotic translation initiation factor 4B 1.71621
EIF5 eukaryotic translation initiation factor 5 1.63479
RPS6 ribosomal protein S6 1.51299
RPS2 ribosomal protein S2 1.47514
RPS5 ribosomal protein S5 1.4429
RPS14 ribosomal protein S14 1.41082
RPS19 ribosomal protein S19 1.39127
EIF5B eukaryotic translation initiation factor 5B 1.34828
RIOK2 RIO kinase 2 1.32925
RPS3 ribosomal protein S3 1.28409
RPS7 ribosomal protein S7 1.26392
RPS23 ribosomal protein S23 1.21738
EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa 1.20447
NOB1 NIN1/RPN12 binding protein 1 homolog (S. cerevisiae) 1.19314
RPS24 ribosomal protein S24 1.15364
LTV1 LTV1 ribosome biogenesis factor 1.15057
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) 1.14546
GNB2L1 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 1.11021
RPS21 ribosomal protein S21 1.08831
RPS17 ribosomal protein S17 1.07765
ERAL1 Era-like 12S mitochondrial rRNA chaperone 1 1.07714
RCL1 RNA terminal phosphate cyclase-like 1 1.07562
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 1.04833
RPS20 ribosomal protein S20 1.03179
RPS12 ribosomal protein S12 1.00547
BMS1 BMS1 ribosome biogenesis factor 1.00153
PRMT3 protein arginine methyltransferase 3 0.997595
RPS28 ribosomal protein S28 0.98683
ELF2 E74-like factor 2 (ets domain transcription factor) 0.948284
RPL35A ribosomal protein L35a 0.940689
EIF4H eukaryotic translation initiation factor 4H 0.929363
PABPC1 poly(A) binding protein, cytoplasmic 1 0.926074
RPS15 ribosomal protein S15 0.926074
RPS8 ribosomal protein S8 0.924197
DDX52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 0.923728
RPS13 ribosomal protein S13 0.922322
EIF3CL eukaryotic translation initiation factor 3, subunit C-like 0.916243
FTSJ2 FtsJ RNA methyltransferase homolog 2 (E. coli) 0.90739
EIF3C eukaryotic translation initiation factor 3, subunit C 0.895331
KRI1 KRI1 homolog (S. cerevisiae) 0.887936
RPS25 ribosomal protein S25 0.873647
RPS3A ribosomal protein S3A 0.867206
BYSL bystin-like 0.862149
NGDN neuroguidin, EIF4E binding protein 0.857555
RPS15A ribosomal protein S15a 0.844696
ZNF24 zinc finger protein 24 0.841023
NOL11 nucleolar protein 11 0.835974
EIF3E eukaryotic translation initiation factor 3, subunit E 0.827254
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.825418
EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 0.813487
UTP20 UTP20, small subunit (SSU) processome component, homolog (yeast) 0.811193
EMG1 EMG1 N1-specific pseudouridine methyltransferase 0.797895
RPL13A ribosomal protein L13a 0.797436
EIF3H eukaryotic translation initiation factor 3, subunit H 0.797436
WDR3 WD repeat domain 3 0.793771
EEF2 eukaryotic translation elongation factor 2 0.788733
LARP4B La ribonucleoprotein domain family, member 4B 0.783698
UTP18 UTP18 small subunit (SSU) processome component homolog (yeast) 0.783241
TIA1 TIA1 cytotoxic granule-associated RNA binding protein 0.775928
RPS9 ribosomal protein S9 0.774101
MKNK1 MAP kinase interacting serine/threonine kinase 1 0.768171
UTP23 UTP23, small subunit (SSU) processome component, homolog (yeast) 0.762252
MRPS22 mitochondrial ribosomal protein S22 0.761342
RRP36 ribosomal RNA processing 36 homolog (S. cerevisiae) 0.755891
EEF2KMT eukaryotic elongation factor 2 lysine methyltransferase 0.746381
NOA1 nitric oxide associated 1 0.745025
PAIP1 poly(A) binding protein interacting protein 1 0.743671
RPS10 ribosomal protein S10 0.740965
MRPS2 mitochondrial ribosomal protein S2 0.738263
UTP14A UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast) 0.735565
RPS16 ribosomal protein S16 0.724812
RPS29 ribosomal protein S29 0.71946
CDV3 CDV3 homolog (mouse) 0.71768
EIF1AY eukaryotic translation initiation factor 1A, Y-linked 0.71768
FAU Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed 0.715458
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 0.715014
WBSCR22 Williams Beuren syndrome chromosome region 22 0.711465
MRPS24 mitochondrial ribosomal protein S24 0.698223
EIF1AX eukaryotic translation initiation factor 1A, X-linked 0.678978
MRPS27 mitochondrial ribosomal protein S27 0.665096
FAM20C family with sequence similarity 20, member C 0.662935
ADGRE2 adhesion G protein-coupled receptor E2 0.654741
EIF3B eukaryotic translation initiation factor 3, subunit B 0.645716
TFB1M transcription factor B1, mitochondrial 0.644429
NOP14 NOP14 nucleolar protein 0.640573
RIOK3 RIO kinase 3 0.637578
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 0.636723
RNASEH2A ribonuclease H2, subunit A 0.633305
PDCD4 programmed cell death 4 (neoplastic transformation inhibitor) 0.625206
EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 0.624355
PTBP1 polypyrimidine tract binding protein 1 0.619255
OGFOD1 2-oxoglutarate and iron-dependent oxygenase domain containing 1 0.613318
MRPS11 mitochondrial ribosomal protein S11 0.612048
MTOR mechanistic target of rapamycin (serine/threonine kinase) 0.609509
RPL18A ribosomal protein L18a 0.608663
NAT10 N-acetyltransferase 10 (GCN5-related) 0.604017
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 0.600223
TXNL4B thioredoxin-like 4B 0.599381
EIF3L eukaryotic translation initiation factor 3, subunit L 0.598538
EIF3F eukaryotic translation initiation factor 3, subunit F 0.594332
ETF1 eukaryotic translation termination factor 1 0.593072
RPL5 ribosomal protein L5 0.589714
RPS18 ribosomal protein S18 0.565923
EIF4E2 eukaryotic translation initiation factor 4E family member 2 0.555559
PRAMEF10 PRAME family member 10 0.548947
MRPS16 mitochondrial ribosomal protein S16 0.548947
SSB Sjogren syndrome antigen B (autoantigen La) 0.545236
UTP6 UTP6, small subunit (SSU) processome component, homolog (yeast) 0.537005
EIF4E1B eukaryotic translation initiation factor 4E family member 1B 0.528388
WDR46 WD repeat domain 46 0.525522
MGAM maltase-glucoamylase 0.523885
CSNK1A1 casein kinase 1, alpha 1 0.516124
RBM22 RNA binding motif protein 22 0.511233
EIF1 eukaryotic translation initiation factor 1 0.499853
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) 0.499042
MTIF2 mitochondrial translational initiation factor 2 0.491348
EIF4A3 eukaryotic translation initiation factor 4A3 0.482467
DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 0.480453
FLVCR1 feline leukemia virus subgroup C cellular receptor 1 0.459602
SNRNP27 small nuclear ribonucleoprotein 27kDa (U4/U6.U5) 0.458803
MSL2 male-specific lethal 2 homolog (Drosophila) 0.447656
UNC45A unc-45 homolog A (C. elegans) 0.444085
MTFMT mitochondrial methionyl-tRNA formyltransferase 0.440124
RPS27 ribosomal protein S27 0.43696
RPL11 ribosomal protein L11 0.434985
RPS26P6 ribosomal protein S26 pseudogene 6 0.432224
DEFA1B defensin, alpha 1B 0.431041
WDR36 WD repeat domain 36 0.430647
MTIF3 mitochondrial translational initiation factor 3 0.427497
GRSF1 G-rich RNA sequence binding factor 1 0.42396
GTF2H1 general transcription factor IIH, polypeptide 1, 62kDa 0.420036
RPSA ribosomal protein SA 0.417685
DEFA1 defensin, alpha 1 0.41612
RPS18P12 ribosomal protein S18 pseudogene 12 0.415337
PPP1R1B protein phosphatase 1, regulatory (inhibitor) subunit 1B 0.409089
PSMD11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 0.406361
RPS27L ribosomal protein S27-like 0.403637
CSDE1 cold shock domain containing E1, RNA-binding 0.401304
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.395485
C11ORF58 chromosome 11 open reading frame 58 0.390841
TFB2M transcription factor B2, mitochondrial 0.389296
P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) 0.385051
MKNK2 MAP kinase interacting serine/threonine kinase 2 0.379276
ELF5 E74-like factor 5 (ets domain transcription factor) 0.378891
RPL3 ribosomal protein L3 0.373516
RPL31 ribosomal protein L31 0.370067
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6 0.368536
EIF6 eukaryotic translation initiation factor 6 0.368153
DAZAP2 DAZ associated protein 2 0.365859
ACSS1 acyl-CoA synthetase short-chain family member 1 0.362422
GPR162 G protein-coupled receptor 162 0.348346
EIF3K eukaryotic translation initiation factor 3, subunit K 0.348346
TPI1 triosephosphate isomerase 1 0.346071
TP53INP1 tumor protein p53 inducible nuclear protein 1 0.344556
RBM8A RNA binding motif protein 8A 0.33511
YBX1 Y box binding protein 1 0.334733
EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 0.331719
PDCD11 programmed cell death 11 0.331719
INS insulin 0.330213
ASCC3 activating signal cointegrator 1 complex subunit 3 0.324201
DDX21 DEAD (Asp-Glu-Ala-Asp) box helicase 21 0.323075
EIF4A2 eukaryotic translation initiation factor 4A2 0.319702
ACO1 aconitase 1, soluble 0.319328
SH2D3A SH2 domain containing 3A 0.318579
YME1L1 YME1-like 1 ATPase 0.317269
CSN1S1 casein alpha s1 0.314839
DAP3 death associated protein 3 0.312224
PES1 pescadillo ribosomal biogenesis factor 1 0.310358
XPO1 exportin 1 0.305143
EIF3G eukaryotic translation initiation factor 3, subunit G 0.29623
DDX24 DEAD (Asp-Glu-Ala-Asp) box helicase 24 0.294007
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.291047
PAPSS1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 0.285138
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein) 0.283663
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.273734
EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 0.261296
DYNC1LI1 dynein, cytoplasmic 1, light intermediate chain 1 0.261296
RPS6KA1 ribosomal protein S6 kinase, 90kDa, polypeptide 1 0.259109
LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) 0.258381
NDC1 NDC1 transmembrane nucleoporin 0.257289
RPL30 ribosomal protein L30 0.255107
KCNG1 potassium channel, voltage gated modifier subfamily G, member 1 0.24894
RPS26 ribosomal protein S26 0.244962
CPEB1 cytoplasmic polyadenylation element binding protein 1 0.239557
TSKU tsukushi, small leucine rich proteoglycan 0.233817
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.227397
IFNG interferon, gamma 0.217861
GCDH glutaryl-CoA dehydrogenase 0.21646
RPL36 ribosomal protein L36 0.214714
SNRPA small nuclear ribonucleoprotein polypeptide A 0.21228
MRPL13 mitochondrial ribosomal protein L13 0.209169
SPTBN1 spectrin, beta, non-erythrocytic 1 0.208481
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.205399
RNASET2 ribonuclease T2 0.204378
SLC35B2 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2 0.203022
FCF1 FCF1 rRNA-processing protein 0.201672
SLC25A18 solute carrier family 25 (glutamate carrier), member 18 0.200999
NOP10 NOP10 ribonucleoprotein 0.198325
PARL presenilin associated, rhomboid-like 0.197993
XRN1 5'-3' exoribonuclease 1 0.195025
ENY2 enhancer of yellow 2 homolog (Drosophila) 0.193719
NCBP2 nuclear cap binding protein subunit 2, 20kDa 0.193719
MIER1 mesoderm induction early response 1, transcriptional regulator 0.1921
ABCE1 ATP-binding cassette, sub-family E (OABP), member 1 0.187646
EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 0.186397
RNMT RNA (guanine-7-) methyltransferase 0.180339
MORF4 mortality factor 4 (pseudogene) 0.179459
TET2 tet methylcytosine dioxygenase 2 0.177439
IFIT1 interferon-induced protein with tetratricopeptide repeats 1 0.175466
RPL14 ribosomal protein L14 0.168847
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 0.168598
HSPBP1 HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 0.166167
PCBP2 poly(rC) binding protein 2 0.165932
AQP9 aquaporin 9 0.165463
THPO thrombopoietin 0.160254
SLC38A2 solute carrier family 38, member 2 0.156688
PTCD3 pentatricopeptide repeat domain 3 0.147151
CBS cystathionine-beta-synthase 0.139637
MAT1A methionine adenosyltransferase I, alpha 0.114318
BDKRB1 bradykinin receptor B1 0.11399
DHRS2 dehydrogenase/reductase (SDR family) member 2 0.113596
NME1 NME/NM23 nucleoside diphosphate kinase 1 0.113534
DCD dermcidin 0.113379
AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 0.113131
MUT methylmalonyl CoA mutase 0.112719
PADI4 peptidyl arginine deiminase, type IV 0.112558
TMTC1 transmembrane and tetratricopeptide repeat containing 1 0.112525
CPN1 carboxypeptidase N, polypeptide 1 0.111602
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 0.11133
CRY1 cryptochrome circadian clock 1 0.111159
CDC6 cell division cycle 6 0.110918
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.109413
SP6 Sp6 transcription factor 0.107654
DAP death-associated protein 0.106933
LPO lactoperoxidase 0.106933