skin stem cell Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description Skin stem cells occur in the basal layer of the epidermis and at the base of hair follicles. (BRENDA Tissue and Enzyme Source Ontology, BTO_0005097)
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Genes

179 proteins co-occuring with the tissue skin stem cell in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
KRT15 keratin 15, type I 2.14694
LRIG1 leucine-rich repeats and immunoglobulin-like domains 1 1.95987
PHLDA1 pleckstrin homology-like domain, family A, member 1 1.67007
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 1.56232
KRT14 keratin 14, type I 1.51855
KRT10 keratin 10, type I 1.29399
KRT19 keratin 19, type I 1.26576
LAMB3 laminin, beta 3 1.24163
FRMD4A FERM domain containing 4A 1.18734
IVL involucrin 1.16737
E4F1 E4F transcription factor 1 1.16072
TFRC transferrin receptor 1.11951
LGR6 leucine-rich repeat containing G protein-coupled receptor 6 1.09562
SETD8 SET domain containing (lysine methyltransferase) 8 1.05985
CEMP1 cementum protein 1 1.01856
LEF1 lymphoid enhancer-binding factor 1 0.985425
BMI1 BMI1 proto-oncogene, polycomb ring finger 0.978049
EZH1 enhancer of zeste 1 polycomb repressive complex 2 subunit 0.95729
REXO2 RNA exonuclease 2 0.902424
MIR95 microRNA 95 0.900721
UTF1 undifferentiated embryonic cell transcription factor 1 0.885862
NES nestin 0.884591
CBX4 chromobox homolog 4 0.876552
CSPG4 chondroitin sulfate proteoglycan 4 0.865155
NANOG Nanog homeobox 0.861363
MACF1 microtubule-actin crosslinking factor 1 0.855891
NOTCH1 notch 1 0.854209
KRT20 keratin 20, type I 0.838672
PPL periplakin 0.827778
SHH sonic hedgehog 0.823175
CD34 CD34 molecule 0.810638
KRT16 keratin 16, type I 0.808968
CD200 CD200 molecule 0.799791
ING5 inhibitor of growth family, member 5 0.790212
BPTF bromodomain PHD finger transcription factor 0.788547
LGALS1 lectin, galactoside-binding, soluble, 1 0.780232
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) 0.761984
NSUN2 NOP2/Sun RNA methyltransferase family, member 2 0.7595
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 0.758259
RNMT RNA (guanine-7-) methyltransferase 0.75495
YAP1 Yes-associated protein 1 0.748753
FBXO11 F-box protein 11 0.747102
GLI1 GLI family zinc finger 1 0.742976
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 0.742152
CLASP2 cytoplasmic linker associated protein 2 0.724863
COL7A1 collagen, type VII, alpha 1 0.7105
LOR loricrin 0.700262
DLL1 delta-like 1 (Drosophila) 0.682695
JARID2 jumonji, AT rich interactive domain 2 0.680248
XPO5 exportin 5 0.676172
TP53 tumor protein p53 0.66925
PTCH1 patched 1 0.655836
ITGA6 integrin, alpha 6 0.650966
BMP4 bone morphogenetic protein 4 0.621428
WNT7A wingless-type MMTV integration site family, member 7A 0.621024
HOXC13 homeobox C13 0.612555
SMO smoothened, frizzled class receptor 0.606514
WNT1 wingless-type MMTV integration site family, member 1 0.592444
KRT5 keratin 5, type II 0.571219
HIPK2 homeodomain interacting protein kinase 2 0.570021
SPRY1 sprouty homolog 1, antagonist of FGF signaling (Drosophila) 0.564035
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.55607
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 0.555671
ZFP42 ZFP42 zinc finger protein 0.554876
AMIGO2 adhesion molecule with Ig-like domain 2 0.540981
KRT8 keratin 8, type II 0.540188
NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 0.539793
HNF4A hepatocyte nuclear factor 4, alpha 0.537812
SFN stratifin 0.520829
FGFBP1 fibroblast growth factor binding protein 1 0.515317
KRT1 keratin 1, type II 0.51453
SPRR1B small proline-rich protein 1B 0.498048
SPRY4 sprouty homolog 4 (Drosophila) 0.494528
PLCD1 phospholipase C, delta 1 0.491791
DSG3 desmoglein 3 0.483986
PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 0.482817
ARNTL aryl hydrocarbon receptor nuclear translocator-like 0.479702
MIR27B microRNA 27b 0.477756
WNT3A wingless-type MMTV integration site family, member 3A 0.476589
ITGB4 integrin, beta 4 0.474258
MLANA melan-A 0.460305
PCNA proliferating cell nuclear antigen 0.459918
CASP14 caspase 14, apoptosis-related cysteine peptidase 0.456055
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.452584
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.444115
CLOCK clock circadian regulator 0.422673
MED1 mediator complex subunit 1 0.42191
PTCH2 patched 2 0.405935
CCND1 cyclin D1 0.404797
FABP5 fatty acid binding protein 5 (psoriasis-associated) 0.404039
BHLHE22 basic helix-loop-helix family, member e22 0.401007
SOX2 SRY (sex determining region Y)-box 2 0.397222
LAMC2 laminin, gamma 2 0.385143
UHRF1 ubiquitin-like with PHD and ring finger domains 1 0.385143
GLB1 galactosidase, beta 1 0.38439
MIR203A microRNA 203a 0.382508
FGF7 fibroblast growth factor 7 0.381755
PRC1 protein regulator of cytokinesis 1 0.373493
LGALS3 lectin, galactoside-binding, soluble, 3 0.369747
MMP7 matrix metallopeptidase 7 0.369373
CHD4 chromodomain helicase DNA binding protein 4 0.365633
KRT75 keratin 75, type II 0.36302
DHH desert hedgehog 0.360036
IL1R2 interleukin 1 receptor, type II 0.350372
IHH indian hedgehog 0.350001
TERF2 telomeric repeat binding factor 2 0.348148
S100A4 S100 calcium binding protein A4 0.344449
ATOH1 atonal homolog 1 (Drosophila) 0.336336
SRF serum response factor (c-fos serum response element-binding transcription factor) 0.335233
FGF10 fibroblast growth factor 10 0.324605
DICER1 dicer 1, ribonuclease type III 0.323509
WNT2B wingless-type MMTV integration site family, member 2B 0.319863
HIST1H4J histone cluster 1, H4j 0.316224
HIST1H4A histone cluster 1, H4a 0.316224
HIST1H4E histone cluster 1, H4e 0.316224
HIST1H4F histone cluster 1, H4f 0.316224
HIST1H4H histone cluster 1, H4h 0.316224
HIST2H4B histone cluster 2, H4b 0.316224
HIST2H4A histone cluster 2, H4a 0.316224
HIST1H4I histone cluster 1, H4i 0.316224
HIST1H4K histone cluster 1, H4k 0.316224
HIST1H4B histone cluster 1, H4b 0.316224
HIST1H4C histone cluster 1, H4c 0.316224
HIST1H4D histone cluster 1, H4d 0.316224
HIST4H4 histone cluster 4, H4 0.314772
CDH1 cadherin 1, type 1, E-cadherin (epithelial) 0.314772
HIST1H4L histone cluster 1, H4l 0.314772
ZMPSTE24 zinc metallopeptidase STE24 0.311507
SOX4 SRY (sex determining region Y)-box 4 0.306444
ACD adrenocortical dysplasia homolog (mouse) 0.305001
MEIS1 Meis homeobox 1 0.303559
DGCR8 DGCR8 microprocessor complex subunit 0.303198
SFRP4 secreted frizzled-related protein 4 0.301758
CDKN2A cyclin-dependent kinase inhibitor 2A 0.30032
FN1 fibronectin 1 0.298883
NGFR nerve growth factor receptor 0.291008
BCL11B B-cell CLL/lymphoma 11B (zinc finger protein) 0.290295
MIR210 microRNA 210 0.28887
KRT7 keratin 7, type II 0.288514
PROM1 prominin 1 0.278251
KRT4 keratin 4, type II 0.275094
LMNA lamin A/C 0.271952
KRT17 keratin 17, type I 0.264696
WNT7B wingless-type MMTV integration site family, member 7B 0.264696
FGF1 fibroblast growth factor 1 (acidic) 0.262645
SOX1 SRY (sex determining region Y)-box 1 0.25858
PARD6A par-6 family cell polarity regulator alpha 0.255234
CD24 CD24 molecule 0.253578
CLEC2A C-type lectin domain family 2, member A 0.253578
ID4 inhibitor of DNA binding 4, dominant negative helix-loop-helix protein 0.249006
ITGB8 integrin, beta 8 0.24676
S100A7 S100 calcium binding protein A7 0.243918
ITGB6 integrin, beta 6 0.242983
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.23961
EGFR epidermal growth factor receptor 0.23459
LPP LIM domain containing preferred translocation partner in lipoma 0.23176
DAZL deleted in azoospermia-like 0.228764
ITGB7 integrin, beta 7 0.226155
KRT18 keratin 18, type I 0.225647
HRAS Harvey rat sarcoma viral oncogene homolog 0.221521
XPC xeroderma pigmentosum, complementation group C 0.219707
SIRT2 sirtuin 2 0.217974
JUP junction plakoglobin 0.217554
S100A6 S100 calcium binding protein A6 0.196433
PDGFA platelet-derived growth factor alpha polypeptide 0.196136
CD8B CD8b molecule 0.194849
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.194064
MITF microphthalmia-associated transcription factor 0.193305
HPSE heparanase 0.19294
MCAM melanoma cell adhesion molecule 0.190556
FST follistatin 0.188492
KITLG KIT ligand 0.1852
UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 0.1821
HOXA9 homeobox A9 0.181421
AXIN2 axin 2 0.180735
ANO1 anoctamin 1, calcium activated chloride channel 0.180587
EVPL envoplakin 0.180165
EFS embryonal Fyn-associated substrate 0.179761
CCNB1 cyclin B1 0.179408