skin melanoma Gene Set

Dataset GWASdb SNP-Disease Associations
Category disease or phenotype associations
Type disease
Description A skin cancer that has_material_basis_in melanocytes. (Human Disease Ontology, DOID_8923)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/DOID:8923
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Genes

61 genes associated with the disease skin melanoma in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset.

Symbol Name Standardized Value
CDK10 cyclin-dependent kinase 10 2.20043
MYH7B myosin, heavy chain 7B, cardiac muscle, beta 1.83338
PIGU phosphatidylinositol glycan anchor biosynthesis, class U 1.83309
TYR tyrosinase 1.77455
FTO fat mass and obesity associated 1.6622
NCOA6 nuclear receptor coactivator 6 1.60998
SPATA33 spermatogenesis associated 33 1.58238
DEF8 differentially expressed in FDCP 8 homolog (mouse) 1.57217
BPIFA3 BPI fold containing family A, member 3 1.54374
AFG3L1P AFG3-like AAA ATPase 1, pseudogene 1.53412
ALS2CR12 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 1.51254
PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent) 1.48714
ATM ATM serine/threonine kinase 1.47287
MX2 MX dynamin-like GTPase 2 1.47287
CASP8 caspase 8, apoptosis-related cysteine peptidase 1.46953
MTAP methylthioadenosine phosphorylase 1.44134
HERC2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 1.38108
CLPTM1L CLPTM1-like 1.37327
DBNDD1 dysbindin (dystrobrevin binding protein 1) domain containing 1 1.33211
NID1 nidogen 1 1.33186
CDK5RAP1 CDK5 regulatory subunit associated protein 1 1.32743
PARP1 poly (ADP-ribose) polymerase 1 1.32087
PHF20 PHD finger protein 20 1.29654
SLC45A2 solute carrier family 45, member 2 1.28906
ANKRD11 ankyrin repeat domain 11 1.26457
ZNF276 zinc finger protein 276 1.17051
DPEP1 dipeptidase 1 (renal) 1.1662
FANCA Fanconi anemia, complementation group A 1.16005
ANXA9 annexin A9 1.14463
CSMD1 CUB and Sushi multiple domains 1 1.03603
CPNE7 copine VII 1.02993
RALY RALY heterogeneous nuclear ribonucleoprotein 0.970888
PRMT8 protein arginine methyltransferase 8 0.929316
COTL1 coactosin-like F-actin binding protein 1 0.922781
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.895671
DOCK8 dedicator of cytokinesis 8 0.885252
SAFB2 scaffold attachment factor B2 0.88034
SOX6 SRY (sex determining region Y)-box 6 0.874542
RPS7P5 ribosomal protein S7 pseudogene 5 0.850354
NTN1 netrin 1 0.837718
TOX2 TOX high mobility group box family member 2 0.830304
PPA2 pyrophosphatase (inorganic) 2 0.822728
PARD3B par-3 family cell polarity regulator beta 0.819144
DNAH9 dynein, axonemal, heavy chain 9 0.800621
PTPRG protein tyrosine phosphatase, receptor type, G 0.79774
ZFAT zinc finger and AT hook domain containing 0.797385
ELMO1 engulfment and cell motility 1 0.797032
E2F1 E2F transcription factor 1 0.793562
ERO1L ERO1-like (S. cerevisiae) 0.785047
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.78442
TNFRSF19 tumor necrosis factor receptor superfamily, member 19 0.774598
GRM7 glutamate receptor, metabotropic 7 0.774032
KIF16B kinesin family member 16B 0.730518
HDAC4 histone deacetylase 4 0.728674
PCDH15 protocadherin-related 15 0.72376
KCNK2 potassium channel, two pore domain subfamily K, member 2 0.70946
LST1 leukocyte specific transcript 1 0.705888
ALDH9A1 aldehyde dehydrogenase 9 family, member A1 0.689868
CLEC4M C-type lectin domain family 4, member M 0.678119
STK4 serine/threonine kinase 4 0.676587
KIFC3 kinesin family member C3 0.669646