skin melanoma Gene Set

Dataset DISEASES Text-mining Gene-Disease Assocation Evidence Scores
Category disease or phenotype associations
Type disease
Description A skin cancer that has_material_basis_in melanocytes. (Human Disease Ontology, DOID_8923)
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Genes

142 genes co-occuring with the disease skin melanoma in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

Symbol Name Standardized Value
NMS neuromedin S 1.7546
TYR tyrosinase 1.13585
SEC23IP SEC23 interacting protein 1.05513
MLANA melan-A 0.979268
MIA melanoma inhibitory activity 0.968761
GNAQ guanine nucleotide binding protein (G protein), q polypeptide 0.965825
G3BP2 GTPase activating protein (SH3 domain) binding protein 2 0.94369
ABCB5 ATP-binding cassette, sub-family B (MDR/TAP), member 5 0.892129
MITF microphthalmia-associated transcription factor 0.854859
EBF3 early B-cell factor 3 0.818385
HRAS Harvey rat sarcoma viral oncogene homolog 0.815924
IFNA8 interferon, alpha 8 0.807308
NRAS neuroblastoma RAS viral (v-ras) oncogene homolog 0.766351
CDKN2A cyclin-dependent kinase inhibitor 2A 0.746798
FGFR1OP FGFR1 oncogene partner 0.731786
MANEA mannosidase, endo-alpha 0.727738
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease 0.720865
KRAS Kirsten rat sarcoma viral oncogene homolog 0.716425
KRT9 keratin 9, type I 0.693098
EFNA1 ephrin-A1 0.658422
TP53 tumor protein p53 0.654858
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.650113
PXDN peroxidasin 0.623751
MCAM melanoma cell adhesion molecule 0.6003
MTAP methylthioadenosine phosphorylase 0.596402
USO1 USO1 vesicle transport factor 0.591337
NR1D1 nuclear receptor subfamily 1, group D, member 1 0.589001
ALDH7A1 aldehyde dehydrogenase 7 family, member A1 0.58433
PRAC1 prostate cancer susceptibility candidate 1 0.583163
KISS1 KiSS-1 metastasis-suppressor 0.577327
TCF21 transcription factor 21 0.574217
PDZD4 PDZ domain containing 4 0.562558
MCM4 minichromosome maintenance complex component 4 0.559839
FZD2 frizzled class receptor 2 0.533475
PMEL premelanosome protein 0.52729
KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog 0.526518
PGLYRP1 peptidoglycan recognition protein 1 0.51842
PLD1 phospholipase D1, phosphatidylcholine-specific 0.514571
CASP3 caspase 3, apoptosis-related cysteine peptidase 0.514186
SH3GL1 SH3-domain GRB2-like 1 0.491978
XPR1 xenotropic and polytropic retrovirus receptor 1 0.485885
MC1R melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor) 0.480945
LGALS7B lectin, galactoside-binding, soluble, 7B 0.473361
MCM3 minichromosome maintenance complex component 3 0.471468
HLA-A major histocompatibility complex, class I, A 0.468441
MIR191 microRNA 191 0.467306
S100B S100 calcium binding protein B 0.460129
TPD52 tumor protein D52 0.459373
WNT5A wingless-type MMTV integration site family, member 5A 0.452585
TCF12 transcription factor 12 0.438282
PCNA proliferating cell nuclear antigen 0.42814
PROM1 prominin 1 0.423265
MMP16 matrix metallopeptidase 16 (membrane-inserted) 0.420266
VEGFC vascular endothelial growth factor C 0.418019
PDXK pyridoxal (pyridoxine, vitamin B6) kinase 0.411283
TPRG1L tumor protein p63 regulated 1-like 0.405305
APAF1 apoptotic peptidase activating factor 1 0.401945
BCL2A1 BCL2-related protein A1 0.401199
CENPF centromere protein F, 350/400kDa 0.398962
CASP9 caspase 9, apoptosis-related cysteine peptidase 0.394491
NES nestin 0.393001
GRK1 G protein-coupled receptor kinase 1 0.392257
NLRP1 NLR family, pyrin domain containing 1 0.378514
ACR acrosin 0.378143
MMP2 matrix metallopeptidase 2 0.376661
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.368518
CTSH cathepsin H 0.361133
BRAF B-Raf proto-oncogene, serine/threonine kinase 0.351923
FASLG Fas ligand (TNF superfamily, member 6) 0.346409
KLK8 kallikrein-related peptidase 8 0.344207
BAX BCL2-associated X protein 0.339806
EHF ets homologous factor 0.337975
AMFR autocrine motility factor receptor, E3 ubiquitin protein ligase 0.331391
CD63 CD63 molecule 0.32701
ADAM9 ADAM metallopeptidase domain 9 0.317545
ANK1 ankyrin 1, erythrocytic 0.309928
KRT15 keratin 15, type I 0.296931
FGF2 fibroblast growth factor 2 (basic) 0.296211
IL2 interleukin 2 0.292975
EBF1 early B-cell factor 1 0.286877
MIB1 mindbomb E3 ubiquitin protein ligase 1 0.283655
PDCL phosducin-like 0.281153
DMBT1 deleted in malignant brain tumors 1 0.277227
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.272953
KIR2DL3 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3 0.272953
CCND1 cyclin D1 0.267622
TFAP2A transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 0.26514
CDH3 cadherin 3, type 1, P-cadherin (placental) 0.252422
CD27 CD27 molecule 0.249608
PTTG1 pituitary tumor-transforming 1 0.246799
THBS1 thrombospondin 1 0.240497
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.238403
NGFR nerve growth factor receptor 0.238403
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.235964
FAM195A family with sequence similarity 195, member A 0.232489
MVP major vault protein 0.232489
TMEM11 transmembrane protein 11 0.231448
CASP6 caspase 6, apoptosis-related cysteine peptidase 0.230063
RCVRN recoverin 0.223165
PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent) 0.221793
TERT telomerase reverse transcriptase 0.217352
IFNB1 interferon, beta 1, fibroblast 0.214297
ICAM1 intercellular adhesion molecule 1 0.212271
KIR2DL1 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1 0.208579
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 0.198386
NMU neuromedin U 0.198386
AQP3 aquaporin 3 (Gill blood group) 0.190476
FXYD5 FXYD domain containing ion transport regulator 5 0.189244
MCOLN1 mucolipin 1 0.187719
JUP junction plakoglobin 0.184424
HLA-B major histocompatibility complex, class I, B 0.180937
ITGA6 integrin, alpha 6 0.178682
MMP9 matrix metallopeptidase 9 0.177576
ZNF135 zinc finger protein 135 0.175947
TYRP1 tyrosinase-related protein 1 0.173571
GRM1 glutamate receptor, metabotropic 1 0.173314
FGFR4 fibroblast growth factor receptor 4 0.167452
PDPN podoplanin 0.166319
ANKRD11 ankyrin repeat domain 11 0.164149
GSR glutathione reductase 0.160021
GNA11 guanine nucleotide binding protein (G protein), alpha 11 (Gq class) 0.144752
KITLG KIT ligand 0.143736
CD68 CD68 molecule 0.14337
NQO1 NAD(P)H dehydrogenase, quinone 1 0.139741
CTSC cathepsin C 0.137077
DSG3 desmoglein 3 0.135956
DSG1 desmoglein 1 0.135929
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.135888
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein 0.135366
PTEN phosphatase and tensin homolog 0.135336
C1QBP complement component 1, q subcomponent binding protein 0.135174
LYVE1 lymphatic vessel endothelial hyaluronan receptor 1 0.134854
EPHA2 EPH receptor A2 0.134474
DES desmin 0.134408
IRF4 interferon regulatory factor 4 0.134392
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.134375
SEBOX SEBOX homeobox 0.13421
HLA-C major histocompatibility complex, class I, C 0.134076
CCND3 cyclin D3 0.13132
NLRP3 NLR family, pyrin domain containing 3 0.12943
MET MET proto-oncogene, receptor tyrosine kinase 0.128488
CDC42 cell division cycle 42 0.126991