skin fibroblast cell line Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
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Genes

195 proteins co-occuring with the tissue skin fibroblast cell line in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
LIG1 ligase I, DNA, ATP-dependent 1.4813
DNAJA3 DnaJ (Hsp40) homolog, subfamily A, member 3 1.26531
MMP1 matrix metallopeptidase 1 1.18201
ZNF74 zinc finger protein 74 1.06382
ECM2 extracellular matrix protein 2, female organ and adipocyte specific 0.97285
KIAA1109 KIAA1109 0.96809
COL1A2 collagen, type I, alpha 2 0.920344
TRIM16 tripartite motif containing 16 0.900721
ACKR1 atypical chemokine receptor 1 (Duffy blood group) 0.880358
MCRS1 microspherule protein 1 0.87782
RAD23A RAD23 homolog A (S. cerevisiae) 0.874439
MMP21 matrix metallopeptidase 21 0.873172
PDCD6IP programmed cell death 6 interacting protein 0.865999
C21ORF2 chromosome 21 open reading frame 2 0.835737
MITF microphthalmia-associated transcription factor 0.834899
AKAP8 A kinase (PRKA) anchor protein 8 0.832385
DEFB105B defensin, beta 105B 0.796874
ACAT2 acetyl-CoA acetyltransferase 2 0.794375
TP53 tumor protein p53 0.772759
MC1R melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor) 0.760328
PEX1 peroxisomal biogenesis factor 1 0.757432
CALY calcyon neuron-specific vesicular protein 0.745451
ABCD3 ATP-binding cassette, sub-family D (ALD), member 3 0.734323
HSF4 heat shock transcription factor 4 0.711729
RUVBL2 RuvB-like AAA ATPase 2 0.703127
RPL29 ribosomal protein L29 0.681471
TYR tyrosinase 0.681471
RFC5 replication factor C (activator 1) 5, 36.5kDa 0.6721
GPC4 glypican 4 0.664775
RFC3 replication factor C (activator 1) 3, 38kDa 0.652589
ZNF222 zinc finger protein 222 0.640833
LILRP1 leukocyte immunoglobulin-like receptor pseudogene 1 0.640833
RFC4 replication factor C (activator 1) 4, 37kDa 0.639214
FAM195A family with sequence similarity 195, member A 0.625869
NLRP2 NLR family, pyrin domain containing 2 0.623446
RPL5 ribosomal protein L5 0.619007
HOXB6 homeobox B6 0.612555
COL1A1 collagen, type I, alpha 1 0.598067
LIG3 ligase III, DNA, ATP-dependent 0.592444
TERT telomerase reverse transcriptase 0.592043
PSD pleckstrin and Sec7 domain containing 0.587228
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.574416
KDM6A lysine (K)-specific demethylase 6A 0.545342
PLK1 polo-like kinase 1 0.531089
EPS8 epidermal growth factor receptor pathway substrate 8 0.524377
MMP26 matrix metallopeptidase 26 0.51335
UPK2 uroplakin 2 0.50942
TMBIM4 transmembrane BAX inhibitor motif containing 4 0.506672
RFC1 replication factor C (activator 1) 1, 145kDa 0.505887
H2AFX H2A histone family, member X 0.49844
IRF3 interferon regulatory factor 3 0.495701
ZEB1 zinc finger E-box binding homeobox 1 0.490229
CDC25C cell division cycle 25C 0.489057
PARP1 poly (ADP-ribose) polymerase 1 0.489057
MFN1 mitofusin 1 0.47348
RIPK2 receptor-interacting serine-threonine kinase 2 0.461078
FN1 fibronectin 1 0.442578
CHEK1 checkpoint kinase 1 0.438356
PRPF4B pre-mRNA processing factor 4B 0.437972
TLK1 tousled-like kinase 1 0.432225
ACAT1 acetyl-CoA acetyltransferase 1 0.430695
FLG filaggrin 0.423818
CASP3 caspase 3, apoptosis-related cysteine peptidase 0.42191
PSG9 pregnancy specific beta-1-glycoprotein 9 0.412391
STK4 serine/threonine kinase 4 0.409351
PLK2 polo-like kinase 2 0.402901
ATM ATM serine/threonine kinase 0.401386
BAX BCL2-associated X protein 0.399492
JUN jun proto-oncogene 0.398357
HOXA5 homeobox A5 0.397979
CHEK2 checkpoint kinase 2 0.3976
WRN Werner syndrome, RecQ helicase-like 0.397222
TCF12 transcription factor 12 0.397222
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 0.394953
PRKD3 protein kinase D3 0.391176
PLK4 polo-like kinase 4 0.388158
TIMP1 TIMP metallopeptidase inhibitor 1 0.382131
PDIA3 protein disulfide isomerase family A, member 3 0.380627
MMP3 matrix metallopeptidase 3 0.379499
CDK7 cyclin-dependent kinase 7 0.373868
DNM1L dynamin 1-like 0.368624
HDAC9 histone deacetylase 9 0.367502
HOXB7 homeobox B7 0.367129
CDC25B cell division cycle 25B 0.364886
ANGPT2 angiopoietin 2 0.351485
CAT catalase 0.348148
RFC2 replication factor C (activator 1) 2, 40kDa 0.347408
DKK3 dickkopf WNT signaling pathway inhibitor 3 0.345558
ACACA acetyl-CoA carboxylase alpha 0.344449
SRSF2 serine/arginine-rich splicing factor 2 0.342971
EGFR epidermal growth factor receptor 0.33965
FGF2 fibroblast growth factor 2 (basic) 0.337072
BIRC5 baculoviral IAP repeat containing 5 0.333028
GLB1 galactosidase, beta 1 0.329727
EREG epiregulin 0.325701
AKAP13 A kinase (PRKA) anchor protein 13 0.32205
HBEGF heparin-binding EGF-like growth factor 0.320227
FOS FBJ murine osteosarcoma viral oncogene homolog 0.319498
CDK9 cyclin-dependent kinase 9 0.316588
AFF2 AF4/FMR2 family, member 2 0.312957
ASGR2 asialoglycoprotein receptor 2 0.306805
COL3A1 collagen, type III, alpha 1 0.30032
ASGR1 asialoglycoprotein receptor 1 0.29673
MFN2 mitofusin 2 0.289939
ANGPT1 angiopoietin 1 0.289582
SIRT1 sirtuin 1 0.287447
MARK2 MAP/microtubule affinity-regulating kinase 2 0.286736
CENPV centromere protein V 0.278603
PDSS1 prenyl (decaprenyl) diphosphate synthase, subunit 1 0.276145
PCNA proliferating cell nuclear antigen 0.274394
SMN1 survival of motor neuron 1, telomeric 0.273346
FMOD fibromodulin 0.2723
IL17A interleukin 17A 0.271256
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1) 0.266413
CSF2RA colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) 0.262304
MMP13 matrix metallopeptidase 13 0.261624
LIG4 ligase IV, DNA, ATP-dependent 0.261284
FGR FGR proto-oncogene, Src family tyrosine kinase 0.259929
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.24676
ERCC2 excision repair cross-complementation group 2 0.246124
FES FES proto-oncogene, tyrosine kinase 0.243294
VCL vinculin 0.240826
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.238108
ITGB4 integrin, beta 4 0.238108
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.233731
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.233446
TKT transketolase 0.231482
AURKB aurora kinase B 0.229568
XPA xeroderma pigmentosum, complementation group A 0.228234
SMN2 survival of motor neuron 2, centromeric 0.2259
PSEN2 presenilin 2 0.225647
PHB prohibitin 0.223419
HDAC3 histone deacetylase 3 0.221061
CEBPD CCAAT/enhancer binding protein (C/EBP), delta 0.217762
XRCC1 X-ray repair complementing defective repair in Chinese hamster cells 1 0.214954
MMP9 matrix metallopeptidase 9 0.214388
JAG2 jagged 2 0.214202
EPB41L4A erythrocyte membrane protein band 4.1 like 4A 0.198016
SUGP1 SURP and G patch domain containing 1 0.192076
TTK TTK protein kinase 0.191208
PTGDS prostaglandin D2 synthase 21kDa (brain) 0.191073
FAM20C family with sequence similarity 20, member C 0.189922
GYPC glycophorin C (Gerbich blood group) 0.188002
CREBBP CREB binding protein 0.186668
PTGIS prostaglandin I2 (prostacyclin) synthase 0.184551
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 0.184485
CDC25A cell division cycle 25A 0.182983
TIMP2 TIMP metallopeptidase inhibitor 2 0.182377
SFRP1 secreted frizzled-related protein 1 0.18231
SRSF1 serine/arginine-rich splicing factor 1 0.182028
TBXAS1 thromboxane A synthase 1 (platelet) 0.181635
UBE2K ubiquitin-conjugating enzyme E2K 0.181528
ANXA5 annexin A5 0.180339
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 0.180208
PI3 peptidase inhibitor 3, skin-derived 0.179729
LUM lumican 0.17909
MAPK8 mitogen-activated protein kinase 8 0.177142
PNP purine nucleoside phosphorylase 0.177027
GADD45A growth arrest and DNA-damage-inducible, alpha 0.176812
PTGIR prostaglandin I2 (prostacyclin) receptor (IP) 0.175866
CASP7 caspase 7, apoptosis-related cysteine peptidase 0.173965
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.173273
ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase 0.171054
FGFR2 fibroblast growth factor receptor 2 0.169037
CD46 CD46 molecule, complement regulatory protein 0.16848
FGF7 fibroblast growth factor 7 0.166595
COMT catechol-O-methyltransferase 0.165601
EDNRA endothelin receptor type A 0.162596
IGHV3-30 immunoglobulin heavy variable 3-30 0.162316
CTSB cathepsin B 0.159938
FASN fatty acid synthase 0.159007
CTSD cathepsin D 0.157227
ADA adenosine deaminase 0.156888
MAPK14 mitogen-activated protein kinase 14 0.154894
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.154758
PROM1 prominin 1 0.153899
TNC tenascin C 0.153528
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.153389
ACTB actin, beta 0.152972
ACTG1 actin gamma 1 0.150598
ADCY2 adenylate cyclase 2 (brain) 0.147921
THRB thyroid hormone receptor, beta 0.145639
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 0.144738
IL11 interleukin 11 0.141412
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 0.141174
KRAS Kirsten rat sarcoma viral oncogene homolog 0.1405
RHD Rh blood group, D antigen 0.140194
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein 0.138639
CASP9 caspase 9, apoptosis-related cysteine peptidase 0.138263
GJA1 gap junction protein, alpha 1, 43kDa 0.13743
CDKN2A cyclin-dependent kinase inhibitor 2A 0.136002
TGFB1 transforming growth factor, beta 1 0.134949
CXCL2 chemokine (C-X-C motif) ligand 2 0.134815
DCT dopachrome tautomerase 0.133403
DKK1 dickkopf WNT signaling pathway inhibitor 1 0.133197