signal recognition particle Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A complex of protein and RNA which facilitates translocation of proteins across membranes. (Gene Ontology, GO_0048500)
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Genes

162 proteins co-occuring with the signal recognition particle cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
SRP54 signal recognition particle 54kDa 3.55694
SRP19 signal recognition particle 19kDa 2.98115
SRP9P1 signal recognition particle 9 pseudogene 1 2.70191
SRP9 signal recognition particle 9kDa 2.70191
SRPR signal recognition particle receptor (docking protein) 2.50207
SRP72 signal recognition particle 72kDa 2.48813
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein) 2.45797
SRP68 signal recognition particle 68kDa 2.34001
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 1.42993
MMP8 matrix metallopeptidase 8 1.41026
KPNA3 karyopherin alpha 3 (importin alpha 4) 1.30927
KPNA1 karyopherin alpha 1 (importin alpha 5) 1.16389
SEC62 SEC62 homolog (S. cerevisiae) 1.13625
SRPX sushi-repeat containing protein, X-linked 0.881938
EVC Ellis van Creveld protein 0.85342
SERPINF2 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2 0.833679
SEC63 SEC63 homolog (S. cerevisiae) 0.830466
RPL23 ribosomal protein L23 0.807982
KPNA5 karyopherin alpha 5 (importin alpha 6) 0.805689
BTF3 basic transcription factor 3 0.788733
PAPOLG poly(A) polymerase gamma 0.787817
C4BPB complement component 4 binding protein, beta 0.774558
PAAF1 proteasomal ATPase-associated factor 1 0.745025
MSMP microseminoprotein, prostate associated 0.738263
TARS2 threonyl-tRNA synthetase 2, mitochondrial (putative) 0.714126
HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 0.710579
EVC2 Ellis van Creveld syndrome 2 0.710579
HARS histidyl-tRNA synthetase 0.708366
ASNA1 arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) 0.706598
DHRS7C dehydrogenase/reductase (SDR family) member 7C 0.701744
PMS1 PMS1 postmeiotic segregation increased 1 (S. cerevisiae) 0.680719
SLC43A1 solute carrier family 43 (amino acid system L transporter), member 1 0.677238
IFT80 intraflagellar transport 80 0.670725
CYB5A cytochrome b5 type A (microsomal) 0.670292
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b 0.65001
TRIM21 tripartite motif containing 21 0.638434
SCARA3 scavenger receptor class A, member 3 0.627335
TROVE2 TROVE domain family, member 2 0.597697
NLRP8 NLR family, pyrin domain containing 8 0.596435
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1 0.593072
DHFR dihydrofolate reductase 0.592652
TRIM24 tripartite motif containing 24 0.575912
RALA v-ral simian leukemia viral oncogene homolog A (ras related) 0.547297
SEPHS1 selenophosphate synthetase 1 0.527979
SRPRB signal recognition particle receptor, B subunit 0.525931
TARS threonyl-tRNA synthetase 0.522659
NEK1 NIMA-related kinase 1 0.518981
C4BPA complement component 4 binding protein, alpha 0.518573
CLK3 CDC-like kinase 3 0.5149
PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 0.506757
TNFSF11 tumor necrosis factor (ligand) superfamily, member 11 0.500664
TTC21B tetratricopeptide repeat domain 21B 0.49418
IFI44 interferon-induced protein 44 0.485289
WDR35 WD repeat domain 35 0.48005
NT5M 5',3'-nucleotidase, mitochondrial 0.47442
ANK1 ankyrin 1, erythrocytic 0.468001
HSPB1 heat shock 27kDa protein 1 0.461199
SNRNP70 small nuclear ribonucleoprotein 70kDa (U1) 0.446069
CYP2B6 cytochrome P450, family 2, subfamily B, polypeptide 6 0.445275
SOX21 SRY (sex determining region Y)-box 21 0.4425
RDH12 retinol dehydrogenase 12 (all-trans/9-cis/11-cis) 0.438542
TRAM1 translocation associated membrane protein 1 0.43617
IL1B interleukin 1, beta 0.422389
GTF2H1 general transcription factor IIH, polypeptide 1, 62kDa 0.421997
RPS15 ribosomal protein S15 0.41886
CRP C-reactive protein, pentraxin-related 0.41143
DNAJC7 DnaJ (Hsp40) homolog, subfamily C, member 7 0.403637
IPO8 importin 8 0.397811
APOBEC3G apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G 0.393549
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.392775
CDA cytidine deaminase 0.379276
GGT6 gamma-glutamyltransferase 6 0.37505
DNAH8 dynein, axonemal, heavy chain 8 0.373899
DEFB103A defensin, beta 103A 0.367388
GGT7 gamma-glutamyltransferase 7 0.366241
GGTLC1 gamma-glutamyltransferase light chain 1 0.365477
GGT5 gamma-glutamyltransferase 5 0.365477
CERKL ceramide kinase-like 0.357467
AARS alanyl-tRNA synthetase 0.354042
SHMT1 serine hydroxymethyltransferase 1 (soluble) 0.352901
SLPI secretory leukocyte peptidase inhibitor 0.350622
RPN1 ribophorin I 0.343799
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.343042
SEC11A SEC11 homolog A (S. cerevisiae) 0.341907
HSPA4 heat shock 70kDa protein 4 0.340395
DEFB103B defensin, beta 103B 0.336996
LARP6 La ribonucleoprotein domain family, member 6 0.336241
RAB40AL RAB40A, member RAS oncogene family-like 0.331719
GTF3C1 general transcription factor IIIC, polypeptide 1, alpha 220kDa 0.330966
ALPPL2 alkaline phosphatase, placental-like 2 0.320826
ALPL alkaline phosphatase, liver/bone/kidney 0.320451
ALPP alkaline phosphatase, placental 0.320077
UCN2 urocortin 2 0.304771
WRAP73 WD repeat containing, antisense to TP73 0.303283
FDXR ferredoxin reductase 0.302912
TIMM44 translocase of inner mitochondrial membrane 44 homolog (yeast) 0.298826
PMS2 PMS2 postmeiotic segregation increased 2 (S. cerevisiae) 0.295489
MFRP membrane frizzled-related protein 0.295489
MOCS2 molybdenum cofactor synthesis 2 0.293637
KCNK6 potassium channel, two pore domain subfamily K, member 6 0.286614
WDR19 WD repeat domain 19 0.281453
FBXL20 F-box and leucine-rich repeat protein 20 0.278877
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase 0.274468
OSM oncostatin M 0.270434
TMPRSS15 transmembrane protease, serine 15 0.267505
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) 0.26312
HLA-DQA2 major histocompatibility complex, class II, DQ alpha 2 0.254017
NDP Norrie disease (pseudoglioma) 0.252564
SRA1 steroid receptor RNA activator 1 0.237042
METAP1 methionyl aminopeptidase 1 0.234533
MKKS McKusick-Kaufman syndrome 0.234533
SRSF9 serine/arginine-rich splicing factor 9 0.228819
KMO kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) 0.225976
MMP1 matrix metallopeptidase 1 0.219617
CRYAB crystallin, alpha B 0.200663
SP6 Sp6 transcription factor 0.198991
CCT4 chaperonin containing TCP1, subunit 4 (delta) 0.190495
CRHR1 corticotropin releasing hormone receptor 1 0.189857
COG8 component of oligomeric golgi complex 8 0.18859
SRSF5 serine/arginine-rich splicing factor 5 0.185777
RPN2 ribophorin II 0.185469
STX2 syntaxin 2 0.18516
SEMG1 semenogelin I 0.183328
TNF tumor necrosis factor 0.182422
IL17A interleukin 17A 0.181823
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease 0.180045
UBTF upstream binding transcription factor, RNA polymerase I 0.180045
RPL19 ribosomal protein L19 0.178588
PRSS21 protease, serine, 21 (testisin) 0.173273
METAP2 methionyl aminopeptidase 2 0.170114
CCDC130 coiled-coil domain containing 130 0.167611
CXCL8 chemokine (C-X-C motif) ligand 8 0.166643
DCPS decapping enzyme, scavenger 0.163865
FGF9 fibroblast growth factor 9 0.16342
TOMM40 translocase of outer mitochondrial membrane 40 homolog (yeast) 0.160658
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) 0.158882
NOP10 NOP10 ribonucleoprotein 0.157397
SPP1 secreted phosphoprotein 1 0.156688
ACVRL1 activin A receptor type II-like 1 0.156513
INVS inversin 0.140253
CRHR2 corticotropin releasing hormone receptor 2 0.140143
MANF mesencephalic astrocyte-derived neurotrophic factor 0.13972
SRSF3 serine/arginine-rich splicing factor 3 0.139691
IBSP integrin-binding sialoprotein 0.139308
RPS5 ribosomal protein S5 0.139287
PAPD7 PAP associated domain containing 7 0.138958
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.138671
SH3BP5 SH3-domain binding protein 5 (BTK-associated) 0.13866
LBP lipopolysaccharide binding protein 0.138469
TGM4 transglutaminase 4 0.13825
LIFR leukemia inhibitory factor receptor alpha 0.137959
SNAPIN SNAP-associated protein 0.137921
EIF5A eukaryotic translation initiation factor 5A 0.137777
IFT122 intraflagellar transport 122 0.137483
TNFRSF11A tumor necrosis factor receptor superfamily, member 11a, NFKB activator 0.137276
RHCE Rh blood group, CcEe antigens 0.137221
HOXA9 homeobox A9 0.136863
TIMP1 TIMP metallopeptidase inhibitor 1 0.136566
STX1A syntaxin 1A (brain) 0.136521
PLAT plasminogen activator, tissue 0.135879
TPP1 tripeptidyl peptidase I 0.135814
STC1 stanniocalcin 1 0.135798