shoot tip Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description The terminal bud (0.1 - 1.0 mm) of a plant, which consists of the apical meristem (0.05 - 0.1 mm) and the immediate surrounding leaf primordia and developing leaves and adjacent stem tissue. (BRENDA Tissue and Enzyme Source Ontology, BTO_0000247)
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Genes

250 proteins co-occuring with the tissue shoot tip in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
DNAJC22 DnaJ (Hsp40) homolog, subfamily C, member 22 2.66152
GUSB glucuronidase, beta 2.09151
MNX1 motor neuron and pancreas homeobox 1 1.96251
NAA15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit 1.85585
AXIN2 axin 2 1.48692
MDN1 MDN1, midasin homolog (yeast) 1.32777
WFDC13 WAP four-disulfide core domain 13 1.30433
RPL27 ribosomal protein L27 1.25503
MYB v-myb avian myeloblastosis viral oncogene homolog 1.24297
AKTIP AKT interacting protein 1.24253
NTHL1 nth endonuclease III-like 1 (E. coli) 1.2198
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein 1.2109
GRWD1 glutamate-rich WD repeat containing 1 1.198
PTGDR prostaglandin D2 receptor (DP) 1.11907
XPO5 exportin 5 1.10889
RPL35 ribosomal protein L35 1.09872
ZFP62 ZFP62 zinc finger protein 1.09429
PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 1.07132
AGO1 argonaute RISC catalytic component 1 1.06206
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein 1.02995
NUDC nudC nuclear distribution protein 1.02381
NR1D1 nuclear receptor subfamily 1, group D, member 1 1.01506
COG7 component of oligomeric golgi complex 7 1.00545
CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 0.992379
FEN1 flap structure-specific endonuclease 1 0.98977
NACA nascent polypeptide-associated complex alpha subunit 0.987162
ATN1 atrophin 1 0.955565
IREB2 iron-responsive element binding protein 2 0.916923
PEBP1 phosphatidylethanolamine binding protein 1 0.905404
NSA2 NSA2 ribosome biogenesis homolog (S. cerevisiae) 0.903275
HMGA1 high mobility group AT-hook 1 0.89647
LSM4 LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.890101
XPOT exportin, tRNA 0.874439
STYX serine/threonine/tyrosine interacting protein 0.872749
GLDC glycine dehydrogenase (decarboxylating) 0.857995
SARM1 sterile alpha and TIR motif containing 1 0.844126
KLK15 kallikrein-related peptidase 15 0.83448
RPL27A ribosomal protein L27a 0.82736
PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 0.826942
KIN Kin17 DNA and RNA binding protein 0.823175
CHAF1A chromatin assembly factor 1, subunit A (p150) 0.816904
RPS15A ribosomal protein S15a 0.813144
ATP13A1 ATPase type 13A1 0.810221
CHMP1A charged multivesicular body protein 1A 0.806465
VTA1 vesicle (multivesicular body) trafficking 1 0.801876
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.797291
MKRN1 makorin ring finger protein 1 0.788547
RNF6 ring finger protein (C3H2C3 type) 6 0.786052
HIST1H4H histone cluster 1, H4h 0.776909
HIST1H4I histone cluster 1, H4i 0.776909
HIST1H4J histone cluster 1, H4j 0.776909
HIST1H4K histone cluster 1, H4k 0.776909
HIST1H4D histone cluster 1, H4d 0.776909
HIST2H4A histone cluster 2, H4a 0.776909
HIST1H4B histone cluster 1, H4b 0.776909
HIST2H4B histone cluster 2, H4b 0.776909
HIST1H4C histone cluster 1, H4c 0.776909
HIST1H4A histone cluster 1, H4a 0.776909
HIST1H4F histone cluster 1, H4f 0.776909
HIST1H4E histone cluster 1, H4e 0.776909
HIST1H4L histone cluster 1, H4l 0.775664
HIST4H4 histone cluster 4, H4 0.775249
EIF3M eukaryotic translation initiation factor 3, subunit M 0.761984
BARD1 BRCA1 associated RING domain 1 0.76157
EIF3H eukaryotic translation initiation factor 3, subunit H 0.757432
HIST1H3E histone cluster 1, H3e 0.748753
POU2AF1 POU class 2 associating factor 1 0.746277
RNMT RNA (guanine-7-) methyltransferase 0.743389
SNRK SNF related kinase 0.741327
HIST1H3C histone cluster 1, H3c 0.733912
HIST1H3H histone cluster 1, H3h 0.733089
ETFA electron-transfer-flavoprotein, alpha polypeptide 0.731031
HIST1H3A histone cluster 1, H3a 0.726097
ELP2 elongator acetyltransferase complex subunit 2 0.724041
MED25 mediator complex subunit 25 0.720755
OPA3 optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia) 0.718292
DDB1 damage-specific DNA binding protein 1, 127kDa 0.713369
DBF4 DBF4 zinc finger 0.711319
ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide 0.710909
OBFC1 oligonucleotide/oligosaccharide-binding fold containing 1 0.707221
GMDS GDP-mannose 4,6-dehydratase 0.706812
MUC5B mucin 5B, oligomeric mucus/gel-forming 0.703536
KCNA1 potassium channel, voltage gated shaker related subfamily A, member 1 0.701489
MUSTN1 musculoskeletal, embryonic nuclear protein 1 0.694128
FPGS folylpolyglutamate synthase 0.685959
BRD1 bromodomain containing 1 0.684735
SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 0.683103
BPGM 2,3-bisphosphoglycerate mutase 0.67495
AGK acylglycerol kinase 0.671692
SF1 splicing factor 1 0.668843
PRR14 proline rich 14 0.655836
RPA2 replication protein A2, 32kDa 0.654618
GRIK2 glutamate receptor, ionotropic, kainate 2 0.652589
CUL2 cullin 2 0.632335
ARF5 ADP-ribosylation factor 5 0.62991
NLRX1 NLR family member X1 0.62991
ADD3 adducin 3 (gamma) 0.624254
HIST1H2AD histone cluster 1, H2ad 0.621831
HIST1H2AJ histone cluster 1, H2aj 0.621831
HIST1H2AH histone cluster 1, H2ah 0.621428
H2AFJ H2A histone family, member J 0.620621
FDFT1 farnesyl-diphosphate farnesyltransferase 1 0.6182
H2AFY2 H2A histone family, member Y2 0.6182
HIST1H2AM histone cluster 1, H2am 0.616183
H2AFB2 H2A histone family, member B2 0.61578
H2AFB1 H2A histone family, member B1 0.61578
H2AFV H2A histone family, member V 0.615377
HIST1H2AG histone cluster 1, H2ag 0.614571
HIST1H2AE histone cluster 1, H2ae 0.608527
HIST1H2AB histone cluster 1, H2ab 0.608527
AGPS alkylglycerone phosphate synthase 0.606916
NYX nyctalopin 0.601686
SEPT3 septin 3 0.600881
SCP2 sterol carrier protein 2 0.598067
H2AFY H2A histone family, member Y 0.587629
NR1H3 nuclear receptor subfamily 1, group H, member 3 0.586427
SECISBP2 SECIS binding protein 2 0.574816
RFC3 replication factor C (activator 1) 3, 38kDa 0.569222
FBLL1 fibrillarin-like 1 0.562042
ICK intestinal cell (MAK-like) kinase 0.558059
ADD2 adducin 2 (beta) 0.550106
BBOX1 butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1 0.547326
ENTPD8 ectonucleoside triphosphate diphosphohydrolase 8 0.547326
ALDH18A1 aldehyde dehydrogenase 18 family, member A1 0.534647
CCNB1 cyclin B1 0.534251
HIST2H2AC histone cluster 2, H2ac 0.533856
HIST2H2AA3 histone cluster 2, H2aa3 0.533065
HIST2H2AA4 histone cluster 2, H2aa4 0.533065
SCRT1 scratch family zinc finger 1 0.527139
CCDC130 coiled-coil domain containing 130 0.524377
GCAT glycine C-acetyltransferase 0.51571
POLI polymerase (DNA directed) iota 0.505495
ACP1 acid phosphatase 1, soluble 0.501965
POLB polymerase (DNA directed), beta 0.500398
HMX1 H6 family homeobox 1 0.494136
TFAP2A transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 0.492572
SLC50A1 solute carrier family 50 (sugar efflux transporter), member 1 0.482428
ENTPD3 ectonucleoside triphosphate diphosphohydrolase 3 0.481648
PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) 0.477756
HK1 hexokinase 1 0.477367
LAX1 lymphocyte transmembrane adaptor 1 0.474646
VIT vitrin 0.474646
XCL1 chemokine (C motif) ligand 1 0.47348
FANCB Fanconi anemia, complementation group B 0.467273
PPCS phosphopantothenoylcysteine synthetase 0.467273
GZMK granzyme K (granzyme 3; tryptase II) 0.465335
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 0.464561
C5ORF38 chromosome 5 open reading frame 38 0.461465
IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial 0.460305
HMX2 H6 family homeobox 2 0.45374
MYLK myosin light chain kinase 0.451042
CDKN2A cyclin-dependent kinase inhibitor 2A 0.436055
ZC3H12D zinc finger CCCH-type containing 12D 0.42649
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.424581
UCK1 uridine-cytidine kinase 1 0.420004
UCKL1 uridine-cytidine kinase 1-like 1 0.418099
BOLL boule-like RNA-binding protein 0.417718
ACO2 aconitase 2, mitochondrial 0.417337
BLVRA biliverdin reductase A 0.409351
SQLE squalene epoxidase 0.408972
AMER1 APC membrane recruitment protein 1 0.408592
KCNA6 potassium channel, voltage gated shaker related subfamily A, member 6 0.402523
TUB tubby bipartite transcription factor 0.396844
FHL1 four and a half LIM domains 1 0.392686
UCK2 uridine-cytidine kinase 2 0.388158
SNORA29 small nucleolar RNA, H/ACA box 29 0.382131
NIN ninein (GSK3B interacting protein) 0.376494
SLC26A2 solute carrier family 26 (anion exchanger), member 2 0.372369
ATP6V0B ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b 0.371994
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase 0.371245
C10ORF2 chromosome 10 open reading frame 2 0.369373
PCCA propionyl CoA carboxylase, alpha polypeptide 0.365633
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.363766
IL17C interleukin 17C 0.360782
MAT2A methionine adenosyltransferase II, alpha 0.35557
EIF5A eukaryotic translation initiation factor 5A 0.351114
ERCC4 excision repair cross-complementation group 4 0.350001
ACO1 aconitase 1, soluble 0.34926
ZNF77 zinc finger protein 77 0.347038
DICER1 dicer 1, ribonuclease type III 0.345558
CMKLR1 chemerin chemokine-like receptor 1 0.344818
CSN1S1 casein alpha s1 0.338177
RAE1 ribonucleic acid export 1 0.337072
ADD1 adducin 1 (alpha) 0.337072
ATP6V0A2 ATPase, H+ transporting, lysosomal V0 subunit a2 0.335968
HMGB2 high mobility group box 2 0.331927
DNM1L dynamin 1-like 0.325335
HVCN1 hydrogen voltage gated channel 1 0.317679
PGAM2 phosphoglycerate mutase 2 (muscle) 0.316588
ROS1 ROS proto-oncogene 1 , receptor tyrosine kinase 0.313683
KDM1A lysine (K)-specific demethylase 1A 0.309697
AGA aspartylglucosaminidase 0.303919
FKBPL FK506 binding protein like 0.302118
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.299242
AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase 0.29673
CAMKK2 calcium/calmodulin-dependent protein kinase kinase 2, beta 0.295655
ADH1B alcohol dehydrogenase 1B (class I), beta polypeptide 0.295297
HMGA2 high mobility group AT-hook 2 0.295297
PGAM1 phosphoglycerate mutase 1 (brain) 0.294581
MAT1A methionine adenosyltransferase I, alpha 0.294581
SLK STE20-like kinase 0.294581
PGD phosphogluconate dehydrogenase 0.294223
ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 0.292793
ODC1 ornithine decarboxylase 1 0.291722
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein 0.289582
ADH1A alcohol dehydrogenase 1A (class I), alpha polypeptide 0.288514
COASY CoA synthase 0.283191
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.280364
ASXL1 additional sex combs like transcriptional regulator 1 0.279659
ASL argininosuccinate lyase 0.25858
RAPGEF1 Rap guanine nucleotide exchange factor (GEF) 1 0.256568
NMT1 N-myristoyltransferase 1 0.254239
PHGDH phosphoglycerate dehydrogenase 0.24486
MDH2 malate dehydrogenase 2, NAD (mitochondrial) 0.242672
UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 0.238108
MDH1 malate dehydrogenase 1, NAD (soluble) 0.236627
ARF6 ADP-ribosylation factor 6 0.22797
PRODH proline dehydrogenase (oxidase) 1 0.227186
PAPSS1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 0.225395
MSMB microseminoprotein, beta- 0.225395
CDK1 cyclin-dependent kinase 1 0.223419
MLXIPL MLX interacting protein-like 0.219485
CYP20A1 cytochrome P450, family 20, subfamily A, polypeptide 1 0.215341
SOD2 superoxide dismutase 2, mitochondrial 0.213833
MAP2K4 mitogen-activated protein kinase kinase 4 0.206619
DNTT DNA nucleotidylexotransferase 0.198548
NSF N-ethylmaleimide-sensitive factor 0.193257
FBXL20 F-box and leucine-rich repeat protein 20 0.189504
LAP3 leucine aminopeptidase 3 0.184258
EDNRA endothelin receptor type A 0.181605
RPTOR regulatory associated protein of MTOR, complex 1 0.164091
PGM1 phosphoglucomutase 1 0.163538
PIWIL1 piwi-like RNA-mediated gene silencing 1 0.163538
H1FOO H1 histone family, member O, oocyte-specific 0.163538
KCNA4 potassium channel, voltage gated shaker related subfamily A, member 4 0.16292
FDPS farnesyl diphosphate synthase 0.162582
MIR17 microRNA 17 0.161794
GOLPH3 golgi phosphoprotein 3 (coat-protein) 0.161389
UBE2S ubiquitin-conjugating enzyme E2S 0.161338
GYPA glycophorin A (MNS blood group) 0.161237
INA internexin neuronal intermediate filament protein, alpha 0.160877
FKBP4 FK506 binding protein 4, 59kDa 0.160302
NTSR1 neurotensin receptor 1 (high affinity) 0.160146
XPO1 exportin 1 0.160092
IPP intracisternal A particle-promoted polypeptide 0.159391
LAMA2 laminin, alpha 2 0.159391
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.15884
OPRL1 opiate receptor-like 1 0.158284
CCNA2 cyclin A2 0.157711
UBE2H ubiquitin-conjugating enzyme E2H 0.156244