rna splicing, via transesterification reactions Gene Set

Dataset GO Biological Process Annotations
Category structural or functional annotations
Type biological process
Description Splicing of RNA via a series of two transesterification reactions. (Gene Ontology, GO_0000375)
External Link http://amigo.geneontology.org/amigo/term/GO:0000375
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Genes

192 genes participating in the rna splicing, via transesterification reactions biological process from the curated GO Biological Process Annotations dataset.

Symbol Name
ALYREF Aly/REF export factor
AQR aquarius intron-binding spliceosomal factor
BCAS2 breast carcinoma amplified sequence 2
BUD13 BUD13 homolog (S. cerevisiae)
BUD31 BUD31 homolog (S. cerevisiae)
CACTIN cactin, spliceosome C complex subunit
CCAR1 cell division cycle and apoptosis regulator 1
CD2BP2 CD2 (cytoplasmic tail) binding protein 2
CDC40 cell division cycle 40
CDC5L cell division cycle 5-like
CDK13 cyclin-dependent kinase 13
CELF3 CUGBP, Elav-like family member 3
CELF4 CUGBP, Elav-like family member 4
CLP1 cleavage and polyadenylation factor I subunit 1
CPSF1 cleavage and polyadenylation specific factor 1, 160kDa
CPSF2 cleavage and polyadenylation specific factor 2, 100kDa
CPSF3 cleavage and polyadenylation specific factor 3, 73kDa
CPSF7 cleavage and polyadenylation specific factor 7, 59kDa
CRNKL1 crooked neck pre-mRNA splicing factor 1
CSTF1 cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa
CSTF2 cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa
CTNNBL1 catenin, beta like 1
CWC15 CWC15 spliceosome-associated protein
CWC22 CWC22 spliceosome-associated protein
CWC27 CWC27 spliceosome-associated protein homolog (S. cerevisiae)
DBR1 debranching RNA lariats 1
DCPS decapping enzyme, scavenger
DDX23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
DDX39A DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5
DGCR14 DiGeorge syndrome critical region gene 14
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15
DHX16 DEAH (Asp-Glu-Ala-His) box polypeptide 16
DHX32 DEAH (Asp-Glu-Ala-His) box polypeptide 32
DHX35 DEAH (Asp-Glu-Ala-His) box polypeptide 35
DHX38 DEAH (Asp-Glu-Ala-His) box polypeptide 38
DHX8 DEAH (Asp-Glu-Ala-His) box polypeptide 8
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9
DNAJC8 DnaJ (Hsp40) homolog, subfamily C, member 8
DQX1 DEAQ box RNA-dependent ATPase 1
EFTUD2 elongation factor Tu GTP binding domain containing 2
EIF4A3 eukaryotic translation initiation factor 4A3
FRG1 FSHD region gene 1
FUS FUS RNA binding protein
GEMIN2 gem (nuclear organelle) associated protein 2
GEMIN5 gem (nuclear organelle) associated protein 5
GEMIN6 gem (nuclear organelle) associated protein 6
GEMIN7 gem (nuclear organelle) associated protein 7
GPATCH1 G patch domain containing 1
GTF2F1 general transcription factor IIF, polypeptide 1, 74kDa
GTF2F2 general transcription factor IIF, polypeptide 2, 30kDa
HNRNPA0 heterogeneous nuclear ribonucleoprotein A0
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1
HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2)
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
HNRNPF heterogeneous nuclear ribonucleoprotein F
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H)
HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 (H')
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9)
HNRNPK heterogeneous nuclear ribonucleoprotein K
HNRNPL heterogeneous nuclear ribonucleoprotein L
HNRNPM heterogeneous nuclear ribonucleoprotein M
HNRNPR heterogeneous nuclear ribonucleoprotein R
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1
HSPA8 heat shock 70kDa protein 8
KHSRP KH-type splicing regulatory protein
LSM1 LSM1, U6 small nuclear RNA associated
LSM2 LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
LSM3 LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)
LSM6 LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
LSM8 LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
MAGOH mago-nashi homolog, proliferation-associated (Drosophila)
MBNL1 muscleblind-like splicing regulator 1
MPHOSPH10 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
NCBP1 nuclear cap binding protein subunit 1, 80kDa
NCBP2 nuclear cap binding protein subunit 2, 20kDa
NHP2L1 NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
NOVA1 neuro-oncological ventral antigen 1
NUDT21 nudix (nucleoside diphosphate linked moiety X)-type motif 21
PABPC1 poly(A) binding protein, cytoplasmic 1
PABPN1 poly(A) binding protein, nuclear 1
PAPOLA poly(A) polymerase alpha
PAPOLB poly(A) polymerase beta (testis specific)
PCBP1 poly(rC) binding protein 1
PCBP2 poly(rC) binding protein 2
PCF11 PCF11 cleavage and polyadenylation factor subunit
PHF5A PHD finger protein 5A
PLRG1 pleiotropic regulator 1
PNN pinin, desmosome associated protein
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa
POLR2C polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
POLR2D polymerase (RNA) II (DNA directed) polypeptide D
POLR2E polymerase (RNA) II (DNA directed) polypeptide E, 25kDa
POLR2F polymerase (RNA) II (DNA directed) polypeptide F
POLR2G polymerase (RNA) II (DNA directed) polypeptide G
POLR2H polymerase (RNA) II (DNA directed) polypeptide H
POLR2I polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa
POLR2J polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa
POLR2K polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa
POLR2L polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa
PPIE peptidylprolyl isomerase E (cyclophilin E)
PPIH peptidylprolyl isomerase H (cyclophilin H)
PPIL1 peptidylprolyl isomerase (cyclophilin)-like 1
PPIL3 peptidylprolyl isomerase (cyclophilin)-like 3
PPWD1 peptidylprolyl isomerase domain and WD repeat containing 1
PQBP1 polyglutamine binding protein 1
PRPF19 pre-mRNA processing factor 19
PRPF3 pre-mRNA processing factor 3
PRPF31 pre-mRNA processing factor 31
PRPF4 pre-mRNA processing factor 4
PRPF4B pre-mRNA processing factor 4B
PRPF6 pre-mRNA processing factor 6
PRPF8 pre-mRNA processing factor 8
PTBP1 polypyrimidine tract binding protein 1
RALY RALY heterogeneous nuclear ribonucleoprotein
RBM17 RNA binding motif protein 17
RBM22 RNA binding motif protein 22
RBM5 RNA binding motif protein 5
RBM8A RNA binding motif protein 8A
RBMX RNA binding motif protein, X-linked
RNPS1 RNA binding protein S1, serine-rich domain
RSRC1 arginine/serine-rich coiled-coil 1
SART1 squamous cell carcinoma antigen recognized by T cells
SART3 squamous cell carcinoma antigen recognized by T cells 3
SCAF11 SR-related CTD-associated factor 11
SF1 splicing factor 1
SF3A1 splicing factor 3a, subunit 1, 120kDa
SF3A2 splicing factor 3a, subunit 2, 66kDa
SF3A3 splicing factor 3a, subunit 3, 60kDa
SF3B1 splicing factor 3b, subunit 1, 155kDa
SF3B2 splicing factor 3b, subunit 2, 145kDa
SF3B3 splicing factor 3b, subunit 3, 130kDa
SF3B4 splicing factor 3b, subunit 4, 49kDa
SF3B5 splicing factor 3b, subunit 5, 10kDa
SF3B6 splicing factor 3b, subunit 6, 14kDa
SFPQ splicing factor proline/glutamine-rich
SKIV2L2 superkiller viralicidic activity 2-like 2 (S. cerevisiae)
SLU7 SLU7 splicing factor homolog (S. cerevisiae)
SMC1A structural maintenance of chromosomes 1A
SMNDC1 survival motor neuron domain containing 1
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5)
SNRNP40 small nuclear ribonucleoprotein 40kDa (U5)
SNRNP70 small nuclear ribonucleoprotein 70kDa (U1)
SNRPA small nuclear ribonucleoprotein polypeptide A
SNRPA1 small nuclear ribonucleoprotein polypeptide A'
SNRPB small nuclear ribonucleoprotein polypeptides B and B1
SNRPB2 small nuclear ribonucleoprotein polypeptide B
SNRPC small nuclear ribonucleoprotein polypeptide C
SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 16kDa
SNRPD2 small nuclear ribonucleoprotein D2 polypeptide 16.5kDa
SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 18kDa
SNRPE small nuclear ribonucleoprotein polypeptide E
SNRPF small nuclear ribonucleoprotein polypeptide F
SNRPG small nuclear ribonucleoprotein polypeptide G
SNW1 SNW domain containing 1
SRRM1 serine/arginine repetitive matrix 1
SRRM2 serine/arginine repetitive matrix 2
SRSF1 serine/arginine-rich splicing factor 1
SRSF10 serine/arginine-rich splicing factor 10
SRSF11 serine/arginine-rich splicing factor 11
SRSF2 serine/arginine-rich splicing factor 2
SRSF3 serine/arginine-rich splicing factor 3
SRSF4 serine/arginine-rich splicing factor 4
SRSF5 serine/arginine-rich splicing factor 5
SRSF6 serine/arginine-rich splicing factor 6
SRSF7 serine/arginine-rich splicing factor 7
SRSF9 serine/arginine-rich splicing factor 9
SUGP1 SURP and G patch domain containing 1
SYF2 SYF2 pre-mRNA-splicing factor
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein
TFIP11 tuftelin interacting protein 11
TRA2A transformer 2 alpha homolog (Drosophila)
TRA2B transformer 2 beta homolog (Drosophila)
TXNL4A thioredoxin-like 4A
U2AF2 U2 small nuclear RNA auxiliary factor 2
UBL5 ubiquitin-like 5
UPF3B UPF3 regulator of nonsense transcripts homolog B (yeast)
USP49 ubiquitin specific peptidase 49
WBP4 WW domain binding protein 4
WDR83 WD repeat domain 83
XAB2 XPA binding protein 2
YBX1 Y box binding protein 1
ZCCHC8 zinc finger, CCHC domain containing 8
ZRSR2 zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2