rhabdomyosarcoma cell line Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
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Genes

286 proteins co-occuring with the tissue rhabdomyosarcoma cell line in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
RHD Rh blood group, D antigen 2.09097
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal) 1.50858
RDM1 RAD52 motif containing 1 1.40248
PAX3 paired box 3 1.34315
GOLPH3L golgi phosphoprotein 3-like 1.32777
GNRH2 gonadotropin-releasing hormone 2 1.23227
TOMM34 translocase of outer mitochondrial membrane 34 1.18379
DGCR14 DiGeorge syndrome critical region gene 14 1.17802
POM121L7 POM121 transmembrane nucleoporin-like 7 1.16515
DUX4L6 double homeobox 4 like 6 1.14254
DUX4L8 double homeobox 4 like 8 1.13014
CDO1 cysteine dioxygenase type 1 1.11066
MYOD1 myogenic differentiation 1 1.09208
MYOG myogenin (myogenic factor 4) 1.08943
PAX7 paired box 7 1.0625
ATP1B4 ATPase, Na+/K+ transporting, beta 4 polypeptide 1.02206
IGFBP6 insulin-like growth factor binding protein 6 1.01287
FLI1 Fli-1 proto-oncogene, ETS transcription factor 1.00807
CHRNA1 cholinergic receptor, nicotinic, alpha 1 (muscle) 0.998908
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.984122
ULK3 unc-51 like kinase 3 0.976315
KCNN1 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 1 0.963335
IGF2 insulin-like growth factor 2 0.95384
KCNN2 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2 0.953409
FTSJ2 FtsJ RNA methyltransferase homolog 2 (E. coli) 0.946517
KCNN3 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 3 0.92805
FTSJ3 FtsJ homolog 3 (E. coli) 0.924194
GSTT2 glutathione S-transferase theta 2 (gene/pseudogene) 0.911373
DDX42 DEAD (Asp-Glu-Ala-Asp) box helicase 42 0.907961
TP53 tumor protein p53 0.906682
GSTT2B glutathione S-transferase theta 2B (gene/pseudogene) 0.902424
XAB2 XPA binding protein 2 0.901998
CDON cell adhesion associated, oncogene regulated 0.874016
CHRNE cholinergic receptor, nicotinic, epsilon (muscle) 0.872749
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) 0.86642
MUSK muscle, skeletal, receptor tyrosine kinase 0.843706
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.836575
RPS5 ribosomal protein S5 0.784388
IGF1R insulin-like growth factor 1 receptor 0.776909
EWSR1 EWS RNA-binding protein 1 0.768197
COL19A1 collagen, type XIX, alpha 1 0.76364
SLC10A6 solute carrier family 10 (sodium/bile acid cotransporter), member 6 0.742152
ETF1 eukaryotic translation termination factor 1 0.727741
SLC10A4 solute carrier family 10, member 4 0.72733
TFAP4 transcription factor AP-4 (activating enhancer binding protein 4) 0.726097
TRIM24 tripartite motif containing 24 0.717882
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.717061
RPLP1 ribosomal protein, large, P1 0.712959
NAP1L4 nucleosome assembly protein 1-like 4 0.697399
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1) 0.682695
TOP1 topoisomerase (DNA) I 0.659897
RAPSN receptor-associated protein of the synapse 0.656648
MGST1 microsomal glutathione S-transferase 1 0.653807
ESD esterase D 0.642454
SLC10A3 solute carrier family 10, member 3 0.642048
MYF6 myogenic factor 6 (herculin) 0.641643
MLNR motilin receptor 0.634358
GPC5 glypican 5 0.630314
MTOR mechanistic target of rapamycin (serine/threonine kinase) 0.625465
EPHA3 EPH receptor A3 0.614974
ITM2A integral membrane protein 2A 0.613361
C19ORF48 chromosome 19 open reading frame 48 0.607319
ACOT1 acyl-CoA thioesterase 1 0.594451
BARHL1 BarH-like homeobox 1 0.590036
PTGDS prostaglandin D2 synthase 21kDa (brain) 0.580017
TDP1 tyrosyl-DNA phosphodiesterase 1 0.54812
TNFRSF10C tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain 0.544946
MMP2 matrix metallopeptidase 2 0.544946
GRIN3B glutamate receptor, ionotropic, N-methyl-D-aspartate 3B 0.541773
GSTM4 glutathione S-transferase mu 4 0.538604
MSTN myostatin 0.536625
TMPO thymopoietin 0.534251
FTSJ1 FtsJ RNA methyltransferase homolog 1 (E. coli) 0.533065
KIF2C kinesin family member 2C 0.531089
CDK4 cyclin-dependent kinase 4 0.516497
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 0.504318
BVES blood vessel epicardial substance 0.489057
WNT2 wingless-type MMTV integration site family member 2 0.486326
HLTF helicase-like transcription factor 0.471539
FGFR1 fibroblast growth factor receptor 1 0.470763
MMRN1 multimerin 1 0.469599
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.46766
COL9A1 collagen, type IX, alpha 1 0.463013
PHLDA2 pleckstrin homology-like domain, family A, member 2 0.459532
DYRK1B dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B 0.442962
TFAP2B transcription factor AP-2 beta (activating enhancer binding protein 2 beta) 0.440274
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.433757
SLAMF6 SLAM family member 6 0.427636
KHK ketohexokinase (fructokinase) 0.422673
DES desmin 0.413912
FOS FBJ murine osteosarcoma viral oncogene homolog 0.412771
TRIM5 tripartite motif containing 5 0.412391
MET MET proto-oncogene, receptor tyrosine kinase 0.411631
XPR1 xenotropic and polytropic retrovirus receptor 1 0.41087
CASP3 caspase 3, apoptosis-related cysteine peptidase 0.409351
USF1 upstream transcription factor 1 0.408212
TSPAN1 tetraspanin 1 0.405176
KAT2B K(lysine) acetyltransferase 2B 0.402523
PIAS2 protein inhibitor of activated STAT, 2 0.40025
PLAGL1 pleiomorphic adenoma gene-like 1 0.396465
NT5C2 5'-nucleotidase, cytosolic II 0.392686
ACVR2B activin A receptor, type IIB 0.392686
EMILIN1 elastin microfibril interfacer 1 0.391176
SP1 Sp1 transcription factor 0.390044
HRAS Harvey rat sarcoma viral oncogene homolog 0.38665
COL5A1 collagen, type V, alpha 1 0.38439
MIR133B microRNA 133b 0.381755
AGER advanced glycosylation end product-specific receptor 0.380627
SLC22A18 solute carrier family 22, member 18 0.377621
DPYSL3 dihydropyrimidinase-like 3 0.367129
DGCR8 DGCR8 microprocessor complex subunit 0.365633
SH2D3C SH2 domain containing 3C 0.363766
COL14A1 collagen, type XIV, alpha 1 0.359292
COL11A1 collagen, type XI, alpha 1 0.35334
CKM creatine kinase, muscle 0.352598
UTS2 urotensin 2 0.352227
GRM8 glutamate receptor, metabotropic 8 0.34926
NNAT neuronatin 0.342602
CARM1 coactivator-associated arginine methyltransferase 1 0.340388
IGF1 insulin-like growth factor 1 (somatomedin C) 0.331927
CSPG4 chondroitin sulfate proteoglycan 4 0.328628
FGF2 fibroblast growth factor 2 (basic) 0.327164
PDZK1IP1 PDZK1 interacting protein 1 0.326067
GRIA4 glutamate receptor, ionotropic, AMPA 4 0.323874
SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 0.319134
ULBP2 UL16 binding protein 2 0.302838
CDC25C cell division cycle 25C 0.302838
CDKN2C cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) 0.302118
STAT1 signal transducer and activator of transcription 1, 91kDa 0.29996
MYF5 myogenic factor 5 0.29996
SUOX sulfite oxidase 0.296372
FLT1 fms-related tyrosine kinase 1 0.296013
PEG3 paternally expressed 3 0.293866
CREBBP CREB binding protein 0.291008
PIDD1 p53-induced death domain protein 1 0.286736
CCND1 cyclin D1 0.282837
KRT75 keratin 75, type II 0.280364
SET SET nuclear proto-oncogene 0.269867
TGFB1 transforming growth factor, beta 1 0.269174
CCNB1 cyclin B1 0.268137
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1 0.260267
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.256902
ZHX2 zinc fingers and homeoboxes 2 0.256234
TNFRSF10A tumor necrosis factor receptor superfamily, member 10a 0.2559
UTS2R urotensin 2 receptor 0.25259
GSTA1 glutathione S-transferase alpha 1 0.251606
RB1 retinoblastoma 1 0.247719
BOC BOC cell adhesion associated, oncogene regulated 0.246442
DIABLO diablo, IAP-binding mitochondrial protein 0.242983
TFRC transferrin receptor 0.242363
FOXO1 forkhead box O1 0.240826
CDC42 cell division cycle 42 0.23961
CD4 CD4 molecule 0.238108
EPS15 epidermal growth factor receptor pathway substrate 15 0.23781
FAM195A family with sequence similarity 195, member A 0.236921
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide 0.23604
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 0.235457
IL15 interleukin 15 0.235457
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.231482
GRIK4 glutamate receptor, ionotropic, kainate 4 0.231206
MLN motilin 0.229299
TNF tumor necrosis factor 0.227445
CCND2 cyclin D2 0.227445
CREB1 cAMP responsive element binding protein 1 0.223419
TGFA transforming growth factor, alpha 0.221989
ENO2 enolase 2 (gamma, neuronal) 0.221755
TP53INP1 tumor protein p53 inducible nuclear protein 1 0.220604
ROS1 ROS proto-oncogene 1 , receptor tyrosine kinase 0.220152
UCN2 urocortin 2 0.219485
FN1 fibronectin 1 0.219264
CDK2 cyclin-dependent kinase 2 0.218186
RPS6KA1 ribosomal protein S6 kinase, 90kDa, polypeptide 1 0.218186
DDIT3 DNA-damage-inducible transcript 3 0.21573
PDGFC platelet derived growth factor C 0.213833
ADAR adenosine deaminase, RNA-specific 0.212761
TIMP2 TIMP metallopeptidase inhibitor 2 0.18361
LIFR leukemia inhibitory factor receptor alpha 0.17496
RHEB Ras homolog enriched in brain 0.171884
DAND5 DAN domain family member 5, BMP antagonist 0.171078
ACVR2A activin A receptor, type IIA 0.170855
BMP1 bone morphogenetic protein 1 0.16949
AHCY adenosylhomocysteinase 0.169025
COL3A1 collagen, type III, alpha 1 0.168801
KLF2 Kruppel-like factor 2 0.168257
TNFRSF14 tumor necrosis factor receptor superfamily, member 14 0.168193
CREM cAMP responsive element modulator 0.168067
LTBR lymphotoxin beta receptor (TNFR superfamily, member 3) 0.167503
CA13 carbonic anhydrase XIII 0.166766
SGK1 serum/glucocorticoid regulated kinase 1 0.166237
NOTCH3 notch 3 0.16425
CDK6 cyclin-dependent kinase 6 0.163713
RPS6 ribosomal protein S6 0.162926
RBP3 retinol binding protein 3, interstitial 0.16225
TYRO3 TYRO3 protein tyrosine kinase 0.161079
NOTCH4 notch 4 0.160529
CD81 CD81 molecule 0.159792
PLEK pleckstrin 0.159313
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 0.158976
JUP junction plakoglobin 0.158852
JAG1 jagged 1 0.15845
FRY furry homolog (Drosophila) 0.156949
MYEF2 myelin expression factor 2 0.156619
PRDX5 peroxiredoxin 5 0.152972
SAG S-antigen; retina and pineal gland (arrestin) 0.15275
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.150866
HIST2H4A histone cluster 2, H4a 0.149968
HIST1H4I histone cluster 1, H4i 0.149968
HIST2H4B histone cluster 2, H4b 0.149968
HIST1H4C histone cluster 1, H4c 0.149968
HIST1H4A histone cluster 1, H4a 0.149968
HIST1H4B histone cluster 1, H4b 0.149968
HIST1H4H histone cluster 1, H4h 0.149968
HIST1H4D histone cluster 1, H4d 0.149968
HIST1H4J histone cluster 1, H4j 0.149968
HIST1H4F histone cluster 1, H4f 0.149968
HIST1H4E histone cluster 1, H4e 0.149968
HIST1H4K histone cluster 1, H4k 0.149968
TGFB3 transforming growth factor, beta 3 0.149889
HIST1H4L histone cluster 1, H4l 0.14985
HIST4H4 histone cluster 4, H4 0.149811
IL1A interleukin 1, alpha 0.149811
DLL1 delta-like 1 (Drosophila) 0.149054
CD9 CD9 molecule 0.148649
IRF6 interferon regulatory factor 6 0.148568
RARS arginyl-tRNA synthetase 0.147664
VEGFA vascular endothelial growth factor A 0.147039
HLA-A major histocompatibility complex, class I, A 0.145847
GNRH1 gonadotropin-releasing hormone 1 (luteinizing-releasing hormone) 0.145198
SOX4 SRY (sex determining region Y)-box 4 0.145022
CDC20 cell division cycle 20 0.144889
CALR calreticulin 0.144053
IFNA2 interferon, alpha 2 0.143827
BAX BCL2-associated X protein 0.14351
LIG1 ligase I, DNA, ATP-dependent 0.14242
GRIN2D glutamate receptor, ionotropic, N-methyl D-aspartate 2D 0.141863
HLA-G major histocompatibility complex, class I, G 0.141214
FURIN furin (paired basic amino acid cleaving enzyme) 0.141167
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 0.140928
EFNA1 ephrin-A1 0.139594
TGFB2 transforming growth factor, beta 2 0.139252
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.138228
GSTA2 glutathione S-transferase alpha 2 0.138179
DDX19B DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 0.13723
COL1A2 collagen, type I, alpha 2 0.13703
RET ret proto-oncogene 0.136831
KLK15 kallikrein-related peptidase 15 0.136375
IGHV3-30 immunoglobulin heavy variable 3-30 0.136324
EFNA5 ephrin-A5 0.136017
LIG4 ligase IV, DNA, ATP-dependent 0.134628
NGFR nerve growth factor receptor 0.134157
CD83 CD83 molecule 0.13225
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.13225
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.130787
KCNJ8 potassium channel, inwardly rectifying subfamily J, member 8 0.130242
PRODH proline dehydrogenase (oxidase) 1 0.130187
SERPINA5 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 0.1298
CXCL16 chemokine (C-X-C motif) ligand 16 0.128408
TXN thioredoxin 0.128183
HLA-DRB1 major histocompatibility complex, class II, DR beta 1 0.127898
STAT2 signal transducer and activator of transcription 2, 113kDa 0.127557
ACHE acetylcholinesterase (Yt blood group) 0.127387
LOX lysyl oxidase 0.127103
CD276 CD276 molecule 0.126072
LIG3 ligase III, DNA, ATP-dependent 0.125088
FGF1 fibroblast growth factor 1 (acidic) 0.124388
LPL lipoprotein lipase 0.123504
SERPIND1 serpin peptidase inhibitor, clade D (heparin cofactor), member 1 0.123445
CXCL12 chemokine (C-X-C motif) ligand 12 0.123386
DRD3 dopamine receptor D3 0.122796
SOX9 SRY (sex determining region Y)-box 9 0.122376
SCARB2 scavenger receptor class B, member 2 0.122316
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.122016
ODC1 ornithine decarboxylase 1 0.121237
SLC10A1 solute carrier family 10 (sodium/bile acid cotransporter), member 1 0.120265
FGFR4 fibroblast growth factor receptor 4 0.119291
SLC10A2 solute carrier family 10 (sodium/bile acid cotransporter), member 2 0.11923
NLE1 notchless homolog 1 (Drosophila) 0.11923
TYK2 tyrosine kinase 2 0.118551
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 0.118241
HDAC9 histone deacetylase 9 0.11787
LCK LCK proto-oncogene, Src family tyrosine kinase 0.11719
MMP11 matrix metallopeptidase 11 0.117065
GSTA3 glutathione S-transferase alpha 3 0.117065
SCN3A sodium channel, voltage gated, type III alpha subunit 0.116813
TXNRD2 thioredoxin reductase 2 0.116813
GSTA4 glutathione S-transferase alpha 4 0.116687