retinoblastoma cell line Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
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Genes

164 proteins co-occuring with the tissue retinoblastoma cell line in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 1.78184
RBP3 retinol binding protein 3, interstitial 1.51712
RB1 retinoblastoma 1 1.5048
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 1.40662
NRL neural retina leucine zipper 1.3759
OPN1LW opsin 1 (cone pigments), long-wave-sensitive 1.34089
OPN1MW2 opsin 1 (cone pigments), medium-wave-sensitive 2 1.33953
OPN1MW opsin 1 (cone pigments), medium-wave-sensitive 1.32822
ABCF3 ATP-binding cassette, sub-family F (GCN20), member 3 1.28322
GNAT2 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 1.23896
BHLHE23 basic helix-loop-helix family, member e23 1.23584
ASMT acetylserotonin O-methyltransferase 1.23494
FABP12 fatty acid binding protein 12 1.22514
PDE6A phosphodiesterase 6A, cGMP-specific, rod, alpha 1.21446
MDM4 MDM4, p53 regulator 1.1421
ABCF1 ATP-binding cassette, sub-family F (GCN20), member 1 1.09606
TP53 tumor protein p53 1.01768
ARR3 arrestin 3, retinal (X-arrestin) 0.984991
EGFLAM EGF-like, fibronectin type III and laminin G domains 0.984556
OPN1SW opsin 1 (cone pigments), short-wave-sensitive 0.971552
CRX cone-rod homeobox 0.970253
GRIK5 glutamate receptor, ionotropic, kainate 5 0.962471
SLC5A6 solute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6 0.953409
SAG S-antigen; retina and pineal gland (arrestin) 0.943935
RHO rhodopsin 0.938777
ABCB10 ATP-binding cassette, sub-family B (MDR/TAP), member 10 0.938777
CRHR1 corticotropin releasing hormone receptor 1 0.927621
TRHDE thyrotropin-releasing hormone degrading enzyme 0.924194
PDE6G phosphodiesterase 6G, cGMP-specific, rod, gamma 0.922055
DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 0.896895
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.890101
ELK1 ELK1, member of ETS oncogene family 0.832804
ABCF2 ATP-binding cassette, sub-family F (GCN20), member 2 0.830709
ENO2 enolase 2 (gamma, neuronal) 0.828197
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.81565
ABCB7 ATP-binding cassette, sub-family B (MDR/TAP), member 7 0.787299
GNAT1 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 0.772759
DRD4 dopamine receptor D4 0.760742
EPCAM epithelial cell adhesion molecule 0.745039
ADRBK2 adrenergic, beta, receptor kinase 2 0.736382
GTSE1 G-2 and S-phase expressed 1 0.726507
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group) 0.720345
PAX6 paired box 6 0.665588
ABCA12 ATP-binding cassette, sub-family A (ABC1), member 12 0.655836
CASP3 caspase 3, apoptosis-related cysteine peptidase 0.650154
DRAM1 DNA-damage regulated autophagy modulator 1 0.632335
MVP major vault protein 0.617393
DDX53 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 0.614974
ANOS1 anosmin 1 0.602892
KIRREL2 kin of IRRE like 2 (Drosophila) 0.602892
E2F4 E2F transcription factor 4, p107/p130-binding 0.59124
MIR191 microRNA 191 0.589234
NR2E1 nuclear receptor subfamily 2, group E, member 1 0.586427
TFAP2B transcription factor AP-2 beta (activating enhancer binding protein 2 beta) 0.58242
PGPEP1 pyroglutamyl-peptidase I 0.582019
ABCA7 ATP-binding cassette, sub-family A (ABC1), member 7 0.567626
CRH corticotropin releasing hormone 0.548517
RCVRN recoverin 0.54812
TOP1 topoisomerase (DNA) I 0.535438
FADS2 fatty acid desaturase 2 0.533856
PPOX protoporphyrinogen oxidase 0.53267
RD3 retinal degeneration 3 0.531879
MIRLET7C microRNA let-7c 0.529903
TFF2 trefoil factor 2 0.504318
SLC1A7 solute carrier family 1 (glutamate transporter), member 7 0.503533
ABCE1 ATP-binding cassette, sub-family E (OABP), member 1 0.495701
TFF1 trefoil factor 1 0.493354
JAG2 jagged 2 0.488667
MYH10 myosin, heavy chain 10, non-muscle 0.483206
MIR22 microRNA 22 0.482038
MSI1 musashi RNA-binding protein 1 0.480091
RCOR1 REST corepressor 1 0.474258
BAX BCL2-associated X protein 0.469211
FABP9 fatty acid binding protein 9, testis 0.466498
NUTM1 NUT midline carcinoma, family member 1 0.461078
MIR10B microRNA 10b 0.454126
CDKN2A cyclin-dependent kinase inhibitor 2A 0.450657
OTX2 orthodenticle homeobox 2 0.440274
ANXA5 annexin A5 0.440274
TICAM2 toll-like receptor adaptor molecule 2 0.42993
NR2E3 nuclear receptor subfamily 2, group E, member 3 0.420004
KIRREL kin of IRRE like (Drosophila) 0.417337
AANAT aralkylamine N-acetyltransferase 0.413532
DEK DEK proto-oncogene 0.40025
VSX2 visual system homeobox 2 0.396465
ACACB acetyl-CoA carboxylase beta 0.364513
ADRA2C adrenoceptor alpha 2C 0.363393
ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 0.363393
UCN urocortin 0.360036
DCT dopachrome tautomerase 0.356314
UCN3 urocortin 3 0.344818
NFATC3 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 0.338545
INS insulin 0.336704
RELN reelin 0.334865
SLC1A6 solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 0.331927
PDCD1LG2 programmed cell death 1 ligand 2 0.331927
CALM3 calmodulin 3 (phosphorylase kinase, delta) 0.327896
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.327896
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.326798
CDKN1A cyclin-dependent kinase inhibitor 1A (p21, Cip1) 0.326067
SNCG synuclein, gamma (breast cancer-specific protein 1) 0.324239
HMGA2 high mobility group AT-hook 2 0.32205
MEIS1 Meis homeobox 1 0.320227
NOVA2 neuro-oncological ventral antigen 2 0.315861
PARP1 poly (ADP-ribose) polymerase 1 0.306083
KDM1A lysine (K)-specific demethylase 1A 0.303919
IRS1 insulin receptor substrate 1 0.300679
MAP2 microtubule-associated protein 2 0.292436
E2F3 E2F transcription factor 3 0.289939
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 0.28887
CACNA1G calcium channel, voltage-dependent, T type, alpha 1G subunit 0.287092
HIST2H3PS2 histone cluster 2, H3, pseudogene 2 0.280717
H3F3A H3 histone, family 3A 0.276495
H3F3B H3 histone, family 3B (H3.3B) 0.276495
EP300 E1A binding protein p300 0.274045
SNAI1 snail family zinc finger 1 0.2723
CAPNS1 calpain, small subunit 1 0.266757
SLC1A2 solute carrier family 1 (glial high affinity glutamate transporter), member 2 0.259254
GLB1 galactosidase, beta 1 0.258917
NEFL neurofilament, light polypeptide 0.25858
CRYAA crystallin, alpha A 0.255567
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.255567
BIRC5 baculoviral IAP repeat containing 5 0.254239
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.252261
CD177 CD177 molecule 0.248361
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.247079
NDRG1 N-myc downstream regulated 1 0.243294
FLT4 fms-related tyrosine kinase 4 0.242983
NCOR1 nuclear receptor corepressor 1 0.241438
PHYH phytanoyl-CoA 2-hydroxylase 0.241438
FGF3 fibroblast growth factor 3 0.240826
GRIN2D glutamate receptor, ionotropic, N-methyl D-aspartate 2D 0.237216
CXADR coxsackie virus and adenovirus receptor 0.234302
NANOG Nanog homeobox 0.232881
MCM2 minichromosome maintenance complex component 2 0.229568
IGF1 insulin-like growth factor 1 (somatomedin C) 0.225395
ROCK1P1 Rho-associated, coiled-coil containing protein kinase 1 pseudogene 1 0.225144
SFRP2 secreted frizzled-related protein 2 0.223177
FN1 fibronectin 1 0.222224
CDK1 cyclin-dependent kinase 1 0.219928
CCNE1 cyclin E1 0.217139
RHAG Rh-associated glycoprotein 0.216933
BCL2L11 BCL2-like 11 (apoptosis facilitator) 0.215341
MIR17 microRNA 17 0.214388
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma 0.214017
MMP2 matrix metallopeptidase 2 0.214017
FAM195A family with sequence similarity 195, member A 0.185465
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.184845
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 0.183943
FOLR1 folate receptor 1 (adult) 0.183943
CD82 CD82 molecule 0.18385
GNB2L1 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 0.183453
CD70 CD70 molecule 0.182795
TNFSF9 tumor necrosis factor (ligand) superfamily, member 9 0.182669
INSR insulin receptor 0.18244
FGFR4 fibroblast growth factor receptor 4 0.182388
GRIK1 glutamate receptor, ionotropic, kainate 1 0.181196
FKBP1A FK506 binding protein 1A, 12kDa 0.180587
CASP6 caspase 6, apoptosis-related cysteine peptidase 0.180498
FECH ferrochelatase 0.180165
CYLD cylindromatosis (turban tumor syndrome) 0.179917
EPHA2 EPH receptor A2 0.179855
CDC25A cell division cycle 25A 0.179855
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 0.179376