retina Gene Set

Dataset TISSUES Curated Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description The sensory membrane that lines the eye, is composed of several layers including one containing the rods and cones, and functions as the immediate instrument of vision by receiving the image formed by the lens and converting it into chemical and nervous signals which reach the brain by way of the optic nerve. (BRENDA Tissue and Enzyme Source Ontology, BTO_0001175)
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Genes

360 proteins highly expressed in the tissue retina from the TISSUES Curated Tissue Protein Expression Evidence Scores dataset.

Symbol Name
ABCA12 ATP-binding cassette, sub-family A (ABC1), member 12
ABCA4 ATP-binding cassette, sub-family A (ABC1), member 4
ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5
ABCG1 ATP-binding cassette, sub-family G (WHITE), member 1
ABLIM1 actin binding LIM protein 1
ACADS acyl-CoA dehydrogenase, C-2 to C-3 short chain
ACOX1 acyl-CoA oxidase 1, palmitoyl
ACSL4 acyl-CoA synthetase long-chain family member 4
ADCY6 adenylate cyclase 6
ADGRG4 adhesion G protein-coupled receptor G4
AGRN agrin
AIPL1 aryl hydrocarbon receptor interacting protein-like 1
AK1 adenylate kinase 1
ALDH4A1 aldehyde dehydrogenase 4 family, member A1
ANK2 ankyrin 2, neuronal
ANKRD33 ankyrin repeat domain 33
ANO2 anoctamin 2, calcium activated chloride channel
AOC2 amine oxidase, copper containing 2 (retina-specific)
AQP1 aquaporin 1 (Colton blood group)
ARL1 ADP-ribosylation factor-like 1
ARL4D ADP-ribosylation factor-like 4D
ARMCX3 armadillo repeat containing, X-linked 3
ARR3 arrestin 3, retinal (X-arrestin)
ATG3 autophagy related 3
ATOH8 atonal homolog 8 (Drosophila)
ATP1A1 ATPase, Na+/K+ transporting, alpha 1 polypeptide
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide
ATP1B2 ATPase, Na+/K+ transporting, beta 2 polypeptide
ATP5A1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
B2M beta-2-microglobulin
BCO1 beta-carotene oxygenase 1
BLOC1S5 biogenesis of lysosomal organelles complex-1, subunit 5, muted
BSG basigin (Ok blood group)
CABP1 calcium binding protein 1
CABP2 calcium binding protein 2
CABP4 calcium binding protein 4
CABP5 calcium binding protein 5
CACNA1F calcium channel, voltage-dependent, L type, alpha 1F subunit
CACNA2D4 calcium channel, voltage-dependent, alpha 2/delta subunit 4
CALN1 calneuron 1
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2
CAPZB capping protein (actin filament) muscle Z-line, beta
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2
CCDC14 coiled-coil domain containing 14
CD44 CD44 molecule (Indian blood group)
CDH23 cadherin-related 23
CDK5RAP2 CDK5 regulatory subunit associated protein 2
CDS1 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1
CDS2 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
CERKL ceramide kinase-like
CHD1L chromodomain helicase DNA binding protein 1-like
CHM choroideremia (Rab escort protein 1)
CHN1 chimerin 1
CHRFAM7A CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion
CHRNA7 cholinergic receptor, nicotinic, alpha 7 (neuronal)
CHURC1 churchill domain containing 1
CISD2 CDGSH iron sulfur domain 2
CLCN3 chloride channel, voltage-sensitive 3
CLCN4 chloride channel, voltage-sensitive 4
CLRN1 clarin 1
CLTB clathrin, light chain B
CLUL1 clusterin-like 1 (retinal)
CNGA1 cyclic nucleotide gated channel alpha 1
CNGB1 cyclic nucleotide gated channel beta 1
CNGB3 cyclic nucleotide gated channel beta 3
CNTNAP2 contactin associated protein-like 2
COG2 component of oligomeric golgi complex 2
CPA6 carboxypeptidase A6
CPLX4 complexin 4
CRB1 crumbs family member 1, photoreceptor morphogenesis associated
CRB2 crumbs family member 2
CRB3 crumbs family member 3
CREBRF CREB3 regulatory factor
CRX cone-rod homeobox
CRYM crystallin, mu
CYP26B1 cytochrome P450, family 26, subfamily B, polypeptide 1
CYP4V2 cytochrome P450, family 4, subfamily V, polypeptide 2
DACH1 dachshund family transcription factor 1
DCUN1D4 DCN1, defective in cullin neddylation 1, domain containing 4
DDX51 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
DGKI diacylglycerol kinase, iota
DHRS3 dehydrogenase/reductase (SDR family) member 3
DHRS7 dehydrogenase/reductase (SDR family) member 7
DHRS9 dehydrogenase/reductase (SDR family) member 9
DLG2 discs, large homolog 2 (Drosophila)
DMD dystrophin
DNAJC16 DnaJ (Hsp40) homolog, subfamily C, member 16
DPYSL4 dihydropyrimidinase-like 4
DRD2 dopamine receptor D2
DST dystonin
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1
ECH1 enoyl CoA hydratase 1, peroxisomal
ECM2 extracellular matrix protein 2, female organ and adipocyte specific
EFR3A EFR3 homolog A (S. cerevisiae)
EGFLAM EGF-like, fibronectin type III and laminin G domains
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific )
ELOVL4 ELOVL fatty acid elongase 4
EMC8 ER membrane protein complex subunit 8
EML5 echinoderm microtubule associated protein like 5
ENO1 enolase 1, (alpha)
ENO2 enolase 2 (gamma, neuronal)
EPB41L2 erythrocyte membrane protein band 4.1-like 2
EPHA5 EPH receptor A5
ESRRG estrogen-related receptor gamma
EYA3 EYA transcriptional coactivator and phosphatase 3
F2RL2 coagulation factor II (thrombin) receptor-like 2
FABP7 fatty acid binding protein 7, brain
FADS1 fatty acid desaturase 1
FAIM Fas apoptotic inhibitory molecule
FAM161A family with sequence similarity 161, member A
FAM189A1 family with sequence similarity 189, member A1
FAM19A2 family with sequence similarity 19 (chemokine (C-C motif)-like), member A2
FBXO44 F-box protein 44
FGF11 fibroblast growth factor 11
FGF12 fibroblast growth factor 12
FGF13 fibroblast growth factor 13
FGF14 fibroblast growth factor 14
FKBP8 FK506 binding protein 8, 38kDa
FMN1 formin 1
FN1 fibronectin 1
FNTA farnesyltransferase, CAAX box, alpha
FOSL2 FOS-like antigen 2
FRMPD1 FERM and PDZ domain containing 1
FRMPD2 FERM and PDZ domain containing 2
FSCN2 fascin actin-bundling protein 2, retinal
FZD5 frizzled class receptor 5
G6PC2 glucose-6-phosphatase, catalytic, 2
GABRR1 gamma-aminobutyric acid (GABA) A receptor, rho 1
GABRR2 gamma-aminobutyric acid (GABA) A receptor, rho 2
GALR3 galanin receptor 3
GBP6 guanylate binding protein family, member 6
GDI1 GDP dissociation inhibitor 1
GLUD2 glutamate dehydrogenase 2
GLUL glutamate-ammonia ligase
GNA11 guanine nucleotide binding protein (G protein), alpha 11 (Gq class)
GNAT1 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1
GNAT2 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2
GNGT2 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2
GOLGB1 golgin B1
GON4L gon-4-like (C. elegans)
GPN3 GPN-loop GTPase 3
GPR143 G protein-coupled receptor 143
GPR152 G protein-coupled receptor 152
GPR155 G protein-coupled receptor 155
GPR75 G protein-coupled receptor 75
GRIK1 glutamate receptor, ionotropic, kainate 1
GRIPAP1 GRIP1 associated protein 1
GRK1 G protein-coupled receptor kinase 1
GRK7 G protein-coupled receptor kinase 7
GUCA1A guanylate cyclase activator 1A (retina)
GUCA1C guanylate cyclase activator 1C
GUCY2D guanylate cyclase 2D, membrane (retina-specific)
GUCY2F guanylate cyclase 2F, retinal
GUK1 guanylate kinase 1
H3F3A H3 histone, family 3A
H3F3B H3 histone, family 3B (H3.3B)
HLX H2.0-like homeobox
HSD17B11 hydroxysteroid (17-beta) dehydrogenase 11
HSD17B14 hydroxysteroid (17-beta) dehydrogenase 14
HTT huntingtin
ICE1 interactor of little elongation complex ELL subunit 1
IGFBP2 insulin-like growth factor binding protein 2, 36kDa
IMPG1 interphotoreceptor matrix proteoglycan 1
INTS3 integrator complex subunit 3
IRF3 interferon regulatory factor 3
ISLR immunoglobulin superfamily containing leucine-rich repeat
KCNQ4 potassium channel, voltage gated KQT-like subfamily Q, member 4
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5
KCTD16 potassium channel tetramerization domain containing 16
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3
KIAA2018 KIAA2018
KIF13A kinesin family member 13A
KIF1A kinesin family member 1A
KIF3A kinesin family member 3A
KIFC3 kinesin family member C3
LGALS12 lectin, galactoside-binding, soluble, 12
LRIT1 leucine-rich repeat, immunoglobulin-like and transmembrane domains 1
LRIT2 leucine-rich repeat, immunoglobulin-like and transmembrane domains 2
LRP12 low density lipoprotein receptor-related protein 12
LYSMD3 LysM, putative peptidoglycan-binding, domain containing 3
MAK male germ cell-associated kinase
MEGF10 multiple EGF-like-domains 10
MFGE8 milk fat globule-EGF factor 8 protein
MIER1 mesoderm induction early response 1, transcriptional regulator
MPP3 membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)
MPP4 membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
MRPL22 mitochondrial ribosomal protein L22
MRPS5 mitochondrial ribosomal protein S5
MSMO1 methylsterol monooxygenase 1
MTA2 metastasis associated 1 family, member 2
MTNR1B melatonin receptor 1B
MTX3 metaxin 3
MYO1F myosin IF
MYO7A myosin VIIA
MYOC myocilin, trabecular meshwork inducible glucocorticoid response
MYRIP myosin VIIA and Rab interacting protein
NAA40 N(alpha)-acetyltransferase 40, NatD catalytic subunit
NCL nucleolin
NDP Norrie disease (pseudoglioma)
NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
NEFM neurofilament, medium polypeptide
NELFE negative elongation factor complex member E
NETO1 neuropilin (NRP) and tolloid (TLL)-like 1
NEUROD1 neuronal differentiation 1
NOS1 nitric oxide synthase 1 (neuronal)
NOS2 nitric oxide synthase 2, inducible
NOTCH2NL notch 2 N-terminal like
NPR1 natriuretic peptide receptor 1
NPVF neuropeptide VF precursor
NR2E3 nuclear receptor subfamily 2, group E, member 3
NRL neural retina leucine zipper
NUB1 negative regulator of ubiquitin-like proteins 1
NUDT21 nudix (nucleoside diphosphate linked moiety X)-type motif 21
NUDT4 nudix (nucleoside diphosphate linked moiety X)-type motif 4
NXNL1 nucleoredoxin-like 1
OLFML2A olfactomedin-like 2A
OLFML2B olfactomedin-like 2B
OPN1LW opsin 1 (cone pigments), long-wave-sensitive
OPN1MW opsin 1 (cone pigments), medium-wave-sensitive
OPN1MW2 opsin 1 (cone pigments), medium-wave-sensitive 2
OPN1SW opsin 1 (cone pigments), short-wave-sensitive
OPTC opticin
ORMDL1 ORMDL sphingolipid biosynthesis regulator 1
OTX2 orthodenticle homeobox 2
PACSIN2 protein kinase C and casein kinase substrate in neurons 2
PAICS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase
PARK2 parkin RBR E3 ubiquitin protein ligase
PCDH15 protocadherin-related 15
PCP4 Purkinje cell protein 4
PDAP1 PDGFA associated protein 1
PDC phosducin
PDE6B phosphodiesterase 6B, cGMP-specific, rod, beta
PDE6C phosphodiesterase 6C, cGMP-specific, cone, alpha prime
PDE6G phosphodiesterase 6G, cGMP-specific, rod, gamma
PDE6H phosphodiesterase 6H, cGMP-specific, cone, gamma
PEX7 peroxisomal biogenesis factor 7
PGAM5 phosphoglycerate mutase family member 5
PHC2 polyhomeotic homolog 2 (Drosophila)
PHLPP2 PH domain and leucine rich repeat protein phosphatase 2
PHYHIPL phytanoyl-CoA 2-hydroxylase interacting protein-like
PKD2L1 polycystic kidney disease 2-like 1
PKM pyruvate kinase, muscle
PLCB4 phospholipase C, beta 4
PLEKHB1 pleckstrin homology domain containing, family B (evectins) member 1
POGZ pogo transposable element with ZNF domain
PORCN porcupine homolog (Drosophila)
POU4F1 POU class 4 homeobox 1
POU4F2 POU class 4 homeobox 2
POU6F2 POU class 6 homeobox 2
PPEF1 protein phosphatase, EF-hand calcium binding domain 1
PPEF2 protein phosphatase, EF-hand calcium binding domain 2
PPP1R3C protein phosphatase 1, regulatory subunit 3C
PPP2R5C protein phosphatase 2, regulatory subunit B', gamma
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform
PRDM2 PR domain containing 2, with ZNF domain
PRKACB protein kinase, cAMP-dependent, catalytic, beta
PTBP2 polypyrimidine tract binding protein 2
PTH2R parathyroid hormone 2 receptor
RAB27A RAB27A, member RAS oncogene family
RAI14 retinoic acid induced 14
RALB v-ral simian leukemia viral oncogene homolog B
RASSF2 Ras association (RalGDS/AF-6) domain family member 2
RAX retina and anterior neural fold homeobox
RBP3 retinol binding protein 3, interstitial
RCVRN recoverin
RDH10 retinol dehydrogenase 10 (all-trans)
RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis)
RDH8 retinol dehydrogenase 8 (all-trans)
RDX radixin
RGMA repulsive guidance molecule family member a
RGPD4 RANBP2-like and GRIP domain containing 4
RGR retinal G protein coupled receptor
RGS16 regulator of G-protein signaling 16
RGS20 regulator of G-protein signaling 20
RGS9 regulator of G-protein signaling 9
RHO rhodopsin
RHOA ras homolog family member A
RHOC ras homolog family member C
RIPPLY3 ripply transcriptional repressor 3
RIT1 Ras-like without CAAX 1
ROM1 retinal outer segment membrane protein 1
RORA RAR-related orphan receptor A
RORB RAR-related orphan receptor B
RP1 retinitis pigmentosa 1 (autosomal dominant)
RP1L1 retinitis pigmentosa 1-like 1
RPE65 retinal pigment epithelium-specific protein 65kDa
RPGR retinitis pigmentosa GTPase regulator
RPGRIP1 retinitis pigmentosa GTPase regulator interacting protein 1
RPL9 ribosomal protein L9
RPS24 ribosomal protein S24
RRAD Ras-related associated with diabetes
RRH retinal pigment epithelium-derived rhodopsin homolog
RS1 retinoschisin 1
RTBDN retbindin
RTN3 reticulon 3
SAG S-antigen; retina and pineal gland (arrestin)
SCAPER S-phase cyclin A-associated protein in the ER
SEC16B SEC16 homolog B (S. cerevisiae)
SERPINI1 serpin peptidase inhibitor, clade I (neuroserpin), member 1
SETX senataxin
SFRP5 secreted frizzled-related protein 5
SGCD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
SHROOM2 shroom family member 2
SIAH1 siah E3 ubiquitin protein ligase 1
SIX3 SIX homeobox 3
SKIV2L2 superkiller viralicidic activity 2-like 2 (S. cerevisiae)
SLC1A7 solute carrier family 1 (glutamate transporter), member 7
SLC24A1 solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
SLC24A2 solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
SLC24A5 solute carrier family 24 (sodium/potassium/calcium exchanger), member 5
SLC25A24 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
SLC35A5 solute carrier family 35, member A5
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6
SOX2 SRY (sex determining region Y)-box 2
SPRR3 small proline-rich protein 3
SPTBN5 spectrin, beta, non-erythrocytic 5
SRRM2 serine/arginine repetitive matrix 2
STAG2 stromal antigen 2
STAU2 staufen double-stranded RNA binding protein 2
STIM2 stromal interaction molecule 2
STRAP serine/threonine kinase receptor associated protein
SV2A synaptic vesicle glycoprotein 2A
SYNPR synaptoporin
TBPL1 TBP-like 1
TEF thyrotrophic embryonic factor
THBS3 thrombospondin 3
TMEM169 transmembrane protein 169
TMEM215 transmembrane protein 215
TMEM50B transmembrane protein 50B
TMOD2 tropomodulin 2 (neuronal)
TMPRSS3 transmembrane protease, serine 3
TOMM40L translocase of outer mitochondrial membrane 40 homolog (yeast)-like
TTR transthyretin
TUBA1A tubulin, alpha 1a
TUBB tubulin, beta class I
TULP1 tubby like protein 1
UNC119 unc-119 homolog (C. elegans)
USP10 ubiquitin specific peptidase 10
USP11 ubiquitin specific peptidase 11
USP9X ubiquitin specific peptidase 9, X-linked
USP9Y ubiquitin specific peptidase 9, Y-linked
VCAM1 vascular cell adhesion molecule 1
VCL vinculin
VEGFA vascular endothelial growth factor A
VEZT vezatin, adherens junctions transmembrane protein
VPS36 vacuolar protein sorting 36 homolog (S. cerevisiae)
VSX1 visual system homeobox 1
WDR48 WD repeat domain 48
WDR75 WD repeat domain 75
ZBED9 zinc finger, BED-type containing 9
ZC3H11A zinc finger CCCH-type containing 11A
ZNF385A zinc finger protein 385A
ZNF518A zinc finger protein 518A
ZNF542P zinc finger protein 542, pseudogene
ZNF568 zinc finger protein 568
ZNF571 zinc finger protein 571
ZNF664 zinc finger protein 664
ZNF793 zinc finger protein 793
ZNF808 zinc finger protein 808